Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_001697.1 Length=32355 Score E Sequences producing significant alignments: (Bits) Value seq1827 84.2 5e-12 >seq1827 Length=14047 Score = 84.2 bits (92), Expect = 5e-12 Identities = 71/86 (83%), Gaps = 1/86 (1%) Strand=Plus/Plus Query 348 AATATTATTGGTGGGTCGTGAAGGATTCGAACCTTCGACCAACGGATTAAAAGTCCGCTG 407 ||||| || |||| ||| |||||| ||||||||||||| | ||||||||||| | || Sbjct 6945 AATATAAT-GGTGAGTCATGAAGGGCTCGAACCTTCGACACCCTGATTAAAAGTCAGGTG 7003 Query 408 CTCTACCGACTGAGCTAACGACCCAA 433 ||||||| |||||||||| ||| ||| Sbjct 7004 CTCTACCAACTGAGCTAATGACTCAA 7029 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 103410341307970