Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq19 114 1e-20 seq63 100 3e-16 seq1634 93.3 5e-14 seq690 93.3 5e-14 seq284 93.3 5e-14 seq131 93.3 5e-14 seq93 93.3 5e-14 seq9 93.3 5e-14 seq3 93.3 5e-14 seq243 91.5 2e-13 seq1433 87.8 2e-12 seq646 87.8 2e-12 seq143 87.8 2e-12 seq113 87.8 2e-12 seq73 87.8 2e-12 seq56 87.8 2e-12 seq1 87.8 2e-12 >seq19 Length=917137 Score = 114 bits (126), Expect = 1e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | ||||||||| | || |||||||||||| ||||| |||| Sbjct 766036 TCCTCCTCTGAGACGGAGCACCAAATGGAGAGTCGACTCCTTTTGAATGTTGTAGTCAGA 766095 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || | |||||| || ||||| ||||||| |||||| || | || Sbjct 766096 CAATGTGCGTCCATCCTCCAACTGCTTTCCGGCGAAGATGAGTCTCTGCTGATCTGGTGG 766155 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | |||||||| | ||| | || | ||||| | | | |||||| | ||| | Sbjct 766156 GATTCCCTCCTTGT-CTTGAATCTTGGCTTTGACATTTTCGATTGTGTCGGAAGCTTCGA 766214 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | ||||| || || || || || ||||| |||||||| |||||| Sbjct 766215 CTTCAAGTGTGATAGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATT 766264 Score = 105 bits (116), Expect = 8e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 ||||| | | ||| | ||||||||| | ||| ||||||||| ||||||||||| | Sbjct 765528 CCTCCACGAAGACGGAGCACCAAATGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAA 765587 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 ||||| | | || || | ||||| |||||||| ||||| || ||||| || | || Sbjct 765588 AGAGTTCTTCCATCCTCCAATTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGTGGA 765647 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | ||||||||| |||||| |||| | | | |||||| | ||| || Sbjct 765648 ATTCCCTCCTTGTCTTGGATTTTAGCCTTGACGTTTTCAATGGTGTCGGAGGCTTCGACT 765707 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | |||||||| || || || || ||||| || ||||| |||||| Sbjct 765708 TCCAAGGTGATGGTCTTTCCAGTGAGGGTCTTGACGAAGATCTGCATT 765755 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||| || || ||||| |||| ||||||||| | || || |||||||| || ||||| Sbjct 766528 CTCCTTCTGGATGTTGTAGTCAGACAGAGTCCGTCCATCCTCGAGCTGCTTTCCGGCGAA 766587 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 ||||| || || ||||| | || | | |||||| ||| ||| || |||| | Sbjct 766588 GATGAGACGTTGTTGGTCTGGTGGAATTCCCTCCTTATCCTGGATCTTGGCCTTGACATT 766647 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | |||||| | ||||| || | ||||||||||| || || | ||| || || Sbjct 766648 CTCGATGGTGTCGGAAGCCTCCACCTCCAGGGTGATGGTTTTTCCAGTCAACGTTTTGAC 766707 Query 43172 AAAGATTTGCAT 43183 ||||||||||| Sbjct 766708 GAAGATTTGCAT 766719 Score = 93.3 bits (102), Expect = 5e-14 Identities = 158/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | ||||| || | || |||||||||||| |||||||| | Sbjct 766264 TCCTCCTCTGAGACGAAGGACCAAGTGAAGAGTCGACTCCTTTTGAATGTTGTAATCGGA 766323 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || ||||| || || ||||| ||||||| |||||||| | || Sbjct 766324 CAAGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGG 766383 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| ||| || ||| | || | | ||||| | || || Sbjct 766384 GATTCCTTCCTTGTCTTGGATCTTGGCTTTAACATTCTCGATGGTGTCAGAAGCCTCGAC 766443 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 || | ||||| || || || || || ||||| |||||||| |||||| Sbjct 766444 TTCAAGTGTGATAGTCTTTCCGGTGAGAGTCTTGACAAAGATCTGCATT 766492 >seq63 Length=460214 Score = 100 bits (110), Expect = 3e-16 Identities = 94/121 (78%), Gaps = 8/121 (7%) Strand=Plus/Plus Query 60017 ATCTTTTATGTAATCAGATAACAACAAATTAACGTTTATGAAAAATTTTCTCCTCGGCAG 60076 || |||| ||||||| || || || || |||| ||||| ||||||| |||| | Sbjct 400122 ATTTTTTTTGTAATCTGAAAAAAAAAA--------TTATAAAAAAGTTTCTCCCCGGCCG 400173 Query 60077 GGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCACTATACTACCGAGG 60136 ||||| |||||| |||||| | ||||||| || |||||||||||||||||||||||| Sbjct 400174 GGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCACTATACTACCGAGG 400233 Query 60137 A 60137 | Sbjct 400234 A 400234 >seq1634 Length=10080 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 3332 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 3391 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 3392 TCACCACTATACTACCGAGGA 3412 >seq690 Length=59725 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 48755 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 48814 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 48815 TCACCACTATACTACCGAGGA 48835 >seq284 Length=156260 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 5833 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 5892 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 5893 TCACCACTATACTACCGAGGA 5913 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| |||||| |||||| |||||| | ||||||| || ||||||||||| Sbjct 37333 TTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCAC 37392 Query 60124 TATACTACCGAGGAT 60138 ||||||||||||||| Sbjct 37393 TATACTACCGAGGAT 37407 >seq131 Length=481718 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 137650 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 137591 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 137590 TCACCACTATACTACCGAGGA 137570 >seq93 Length=683282 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 476075 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 476016 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 476015 TCACCACTATACTACCGAGGA 475995 >seq9 Length=1947873 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1108730 AAAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1108671 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1108670 TCACCACTATACTACCGAGGA 1108650 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || ||| Sbjct 1118779 AAAAATGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATA 1118720 Query 60116 CTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||| Sbjct 1118719 CTCACCACTATACTACCGAGGA 1118698 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1039643 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1039584 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1039583 TCACCACTATACTACCGAGGA 1039563 >seq3 Length=2326883 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1259085 AAAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1259144 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1259145 TCACCACTATACTACCGAGGA 1259165 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 2322170 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 2322111 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 2322110 TCACCACTATACTACCGAGGA 2322090 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1009595 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1009654 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1009655 TCACCACTATACTACCGAGGA 1009675 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1041243 AAAAAAATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1041302 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1041303 TCACCACTATACTACCGAGGA 1041323 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1049006 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1049065 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1049066 TCACCACTATACTACCGAGGA 1049086 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1380134 AAAAAAGTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1380075 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1380074 TCACCACTATACTACCGAGGA 1380054 >seq243 Length=148806 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 60057 AAAAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || ||| Sbjct 16744 AAAAATATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATA 16803 Query 60116 CTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||| Sbjct 16804 CTCACCACTATACTACCGAGGA 16825 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 17016 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 16957 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 16956 TCACCACTATACTACCGAGGA 16936 >seq1433 Length=12462 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 532 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 591 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 592 TCACCACTATACTACCGAGGA 612 >seq646 Length=41434 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 3203 AAAAGGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 3262 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 3263 TCACCACTATACTACCGAGGA 3283 >seq143 Length=196746 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 159672 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 159613 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 159612 TCACCACTATACTACCGAGGA 159592 >seq113 Length=352302 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 327209 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 327150 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 327149 TCACCACTATACTACCGAGGA 327129 >seq73 Length=405645 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 15907 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 15966 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 15967 TCACCACTATACTACCGAGGA 15987 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 22151 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 22210 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 22211 TCACCACTATACTACCGAGGA 22231 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 35380 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 35321 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 35320 TCACCACTATACTACCGAGGA 35300 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 38576 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 38635 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 38636 TCACCACTATACTACCGAGGA 38656 Score = 87.8 bits (96), Expect = 2e-12 Identities = 71/85 (84%), Gaps = 1/85 (1%) Strand=Plus/Plus Query 60054 ATGAAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGAC 60112 |||||||| |||||| |||| |||||| |||||| |||||| | ||||||| || Sbjct 68774 ATGAAAAAGAATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGG 68833 Query 60113 ATACTCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||||||| Sbjct 68834 ATACTCACCACTATACTACCGAGGA 68858 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 ||||||| |||| |||||| |||||| |||||| | ||||||| || |||||||||| Sbjct 34191 TTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCA 34250 Query 60123 CTATACTACCGAGGA 60137 ||||||||||||||| Sbjct 34251 CTATACTACCGAGGA 34265 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/75 (85%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 60063 TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCA 60122 ||||||| |||| |||||| |||||| |||||| | ||||||| || |||||||||| Sbjct 37796 TTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCA 37737 Query 60123 CTATACTACCGAGGA 60137 ||||||||||||||| Sbjct 37736 CTATACTACCGAGGA 37722 >seq56 Length=862907 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 681200 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 681259 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 681260 TCACCACTATACTACCGAGGA 681280 >seq1 Length=4147112 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 876746 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 876805 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 876806 TCACCACTATACTACCGAGGA 876826 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1186445 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1186386 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1186385 TCACCACTATACTACCGAGGA 1186365 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571793976785400