Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11-
15] 3,305 sequences; 190,369,721 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq133 197 2e-46
seq23 197 2e-46
seq2502 192 9e-45
seq2241 192 9e-45
seq1789 192 9e-45
seq939 192 9e-45
seq28 187 4e-43
seq11 178 2e-40
seq862 159 5e-35
seq350 159 5e-35
seq341 159 5e-35
seq470 154 2e-33
seq152 154 2e-33
seq354 152 8e-33
seq1412 145 1e-30
seq140 145 1e-30
>seq133
Length=283667
Score = 197 bits (218), Expect = 2e-46
Identities = 187/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 175383 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 175442
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 175443 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 175502
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 175503 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 175562
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| |||||||| |||||||||| ||||| ||||||||
Sbjct 175563 CACGCCAAGAGAAAGACTGTCACCGCCATGGATGTCGTCTATGCTTTGAAGCGTCAAGG 175621
Score = 197 bits (218), Expect = 2e-46
Identities = 187/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 179204 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 179263
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 179264 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 179323
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 179324 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 179383
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| |||||||| |||||||||| ||||| ||||||||
Sbjct 179384 CACGCCAAGAGAAAGACTGTCACCGCCATGGATGTCGTCTATGCTTTGAAGCGTCAAGG 179442
Score = 197 bits (218), Expect = 2e-46
Identities = 187/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 183240 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 183299
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || | |
Sbjct 183300 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACT 183359
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 183360 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 183419
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 183420 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 183478
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 171063 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 171004
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 171003 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 170944
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 170943 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 170884
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 170883 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 170825
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 188007 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 188066
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 188067 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 188126
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 188127 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 188186
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 188187 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 188245
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 191738 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 191797
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 191798 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 191857
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 191858 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 191917
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 191918 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 191976
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 195956 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 196015
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 196016 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 196075
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 196076 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 196135
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 196136 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 196194
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 203450 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 203391
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 203390 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 203331
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 203330 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 203271
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 203270 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 203212
Score = 185 bits (204), Expect = 1e-42
Identities = 206/274 (75%), Gaps = 1/274 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 199236 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 199177
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 199176 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 199117
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | || || ||| ||| |||| |||||| || ||| ||||
Sbjct 199116 CGTGGAGTTCTTAAGGTTTTTCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 199057
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | |||||||||||| ||||||| |||||||||| |||| ||||||||
Sbjct 199056 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTCTGAAGCGTCAAGGA 198997
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTA 16706
| | | || || || ||| | |||| |||||
Sbjct 198996 AGAACCCTGTACGGATTCGGAGGATAAT-TTCTA 198964
Score = 107 bits (118), Expect = 3e-19
Identities = 156/218 (72%), Gaps = 2/218 (1%)
Strand=Plus/Plus
Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512
|||||||||| |||||| |||||| || ||||| || ||||| || | | ||
Sbjct 187374 TCTTCGAGATGACATCCCTATAATCACGAACGATGCTATTCGCCGTCTCGCCAGAAGAGG 187433
Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572
|| || |||| |||||||| | |||| || || | |||| | | | ||| | ||
Sbjct 187434 AAGAATCTGGCGTATCTCTGGACTCATCTACGAGGAAACCCGTGCAGGTCTTAAGGTTTT 187493
Query 16573 CCTCAAGACCGTTATCCA-TGATGCTTTCCACTATACCGAGCACGCTAAAC-GTAAGACT 16630
||| ||| ||| |||| |||||| || ||| ||||||||| || | ||||||
Sbjct 187494 CCTTGAGAACGTCATCCTGTGATGCCGTCACCTACTGCGAGCACGCCAATGAGAAAGACT 187553
Query 16631 GTCACCTCCATGGATATCGTCTATGCATTGAAACGTCA 16668
|||||| ||||||| |||||||||| ||||| |||||
Sbjct 187554 GTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCA 187591
>seq23
Length=1480539
Score = 197 bits (218), Expect = 2e-46
Identities = 187/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 1247815 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 1247874
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 1247875 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 1247934
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 1247935 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 1247994
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
|||||||| | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 1247995 CACGCTAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 1248053
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 1243675 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 1243616
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 1243615 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 1243556
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 1243555 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 1243496
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 1243495 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 1243437
Score = 188 bits (208), Expect = 1e-43
Identities = 185/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 1251859 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 1251800
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 1251799 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 1251740
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| || |||| |||||| || ||| ||||
Sbjct 1251739 CGTGGAGTTCTTAAGGTTTTCCTTGAGAATGTCATCCGTGATGCCGTCACCTACTGCGAG 1251680
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 1251679 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 1251621
>seq2502
Length=5211
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 1734 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 1675
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 1674 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 1615
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 1614 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 1555
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 1554 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 1496
>seq2241
Length=8229
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 6872 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 6931
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 6932 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 6991
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 6992 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 7051
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 7052 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 7110
>seq1789
Length=15089
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 199 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 258
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 259 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 318
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 319 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 378
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 379 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 437
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 8567 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 8508
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 8507 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 8448
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 8447 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 8388
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 8387 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 8329
>seq939
Length=19686
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 4114 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 4173
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 4174 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 4233
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 4234 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 4293
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 4294 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 4352
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 7315 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 7256
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 7255 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 7196
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 7195 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 7136
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 7135 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 7077
Score = 192 bits (212), Expect = 9e-45
Identities = 186/239 (78%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 13192 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 13251
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 13252 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 13311
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | ||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 13312 CGTGGAGTTCTTAAGGTTTTCCTTGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 13371
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||||||| ||||||| |||||||||| ||||| ||||||||
Sbjct 13372 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 13430
Score = 105 bits (116), Expect = 1e-18
Identities = 85/103 (83%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||||||
Sbjct 735 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCTATT 794
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGAT 16535
|| ||||| || | | || |||||||||||| |||||||||
Sbjct 795 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGAT 837
>seq28
Length=1206387
Score = 187 bits (206), Expect = 4e-43
Identities = 188/241 (78%), Gaps = 4/241 (2%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||| ||
Sbjct 388966 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCAATT 388907
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| | |||||| | |||| || || |
Sbjct 388906 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATTTCTGGACTCATCTACGAGGAAACC 388847
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610
|||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| ||| ||
Sbjct 388846 CGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTC-ACT-TACTGCG 388789
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || | ||||| |||||| ||||||| ||||||||||||||||||| ||||
Sbjct 388788 AGCACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTCTATGCATTGAAACGCCAAG 388729
Query 16671 G 16671
|
Sbjct 388728 G 388728
Score = 187 bits (206), Expect = 4e-43
Identities = 188/241 (78%), Gaps = 4/241 (2%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||| ||
Sbjct 394282 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCAATT 394341
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| | |||||| | |||| || || |
Sbjct 394342 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATTTCTGGACTCATCTACGAGGAAACC 394401
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610
|||| ||| | ||| | |||||| ||| ||| |||| |||||| | |||| ||| ||
Sbjct 394402 CGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGT-CACT-TACTGCG 394459
Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670
||||||| || | ||||| |||||| ||||||| ||||||||||||||||||| ||||
Sbjct 394460 AGCACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTCTATGCATTGAAACGCCAAG 394519
Query 16671 G 16671
|
Sbjct 394520 G 394520
Score = 183 bits (202), Expect = 5e-42
Identities = 184/239 (77%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| |||||| |||||||||||||||||||| |||||||| ||
Sbjct 385722 GCCAAGCGCCATCGCAAGGTTCTTCGTGATAACATCCAAGGAATCACGAAGCCAGCAATT 385663
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| ||| | |||||| | |||| || || |
Sbjct 385662 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGTATTTCTGGACTCATCTACGAGGAAACC 385603
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| ||||
Sbjct 385602 CGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTCACCTACTGCGAG 385543
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | ||||| |||||| ||||||| ||||||||||||||||||| |||||
Sbjct 385542 CACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTCTATGCATTGAAACGCCAAGG 385484
>seq11
Length=2072269
Score = 178 bits (196), Expect = 2e-40
Identities = 203/273 (74%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | ||||| || |||||||||||||||||||||||||| |||
Sbjct 119667 GCCAAGCGCCATCGCAAAGTCCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCCATC 119608
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||||||| |||||||| | |||| || || |
Sbjct 119607 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 119548
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 119547 CGTGGAGTCTTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 119488
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | ||||| |||||| ||||||| |||| || || |||||||| |||||
Sbjct 119487 CACGCCAAAAGAAAGACCGTCACCGCCATGGACGTCGTTTACGCTTTGAAACGCCAAGGA 119428
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | || || || ||| | |||| ||||
Sbjct 119427 AGAACTCTGTACGGATTCGGAGGATAATTTTCT 119395
Score = 178 bits (196), Expect = 2e-40
Identities = 203/273 (74%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | ||||| || |||||||||||||||||||||||||| |||
Sbjct 142775 GCCAAGCGCCATCGCAAAGTCCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCGATC 142716
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | || |||||||||||| |||||||| | |||| || || |
Sbjct 142715 CGCCGTCTCGCCAGAAAAGGAGGAGTCAAGCGTATCTCTGGACTCATCTACGAGGAAACC 142656
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 142655 CGTGGAGTCTTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 142596
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | |||||||||||| | ||||| | ||||| || |||||||| |||||
Sbjct 142595 CACGCCAAAAGAAAGACTGTCACCGCTATGGACGTTGTCTACGCTTTGAAACGCCAAGGA 142536
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | ||||| || ||| | |||| ||||
Sbjct 142535 AGAACCGTGTATGGATTCGGAGGATAATTTTCT 142503
Score = 143 bits (158), Expect = 4e-30
Identities = 159/212 (75%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| |||||||||||||||||||||||||| ||||| ||||| || | | || ||||||
Sbjct 197061 GACAACATCCAAGGAATCACCAAGCCAGCCATCCGCCGTCTCGCCAGAAGAGGAGGAGTC 197120
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|| || | || | ||||| ||||| | |||| ||| | | | | |||||| ||
Sbjct 197121 AAACGCATTTCAAACCTCGTCTACGAAGAAACCCGTGGAGTTCTCAGGGTTTTCCTCGAG 197180
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||| |||| ||| || || ||| ||||||||| ||| | |||||||||||| ||
Sbjct 197181 AACGTCATCCGTGACGCCGTCACCTACTGCGAGCACGCCAAAAGAAAGACTGTCACCACC 197240
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| | ||||| || |||||||| |||||
Sbjct 197241 ATGGACGTTGTCTACGCTTTGAAACGCCAAGG 197272
Score = 123 bits (136), Expect = 4e-24
Identities = 175/246 (71%), Gaps = 0/246 (0%)
Strand=Plus/Minus
Query 16460 GATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTC 16519
|| || || |||||||||||||||||||| ||||| ||||| || | || || |||
Sbjct 195518 GACAATATTCAAGGAATCACCAAGCCAGCCATCCGCCGTCTCGCCAGAAAAGGAGGCGTC 195459
Query 16520 AAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAG 16579
|| || |||||| |||| || || | |||| || ||||| | ||||| |
Sbjct 195458 AAACGAATCTCTGAGCCAATCTACGAGGAAACCCGTGGAGTCCTGAAGGTGTTCCTTGAA 195399
Query 16580 ACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCC 16639
| ||| |||| || || || |||| | ||||||| ||| | ||||| |||||| ||
Sbjct 195398 AACGTCATCCGCGACGCCGTCAACTACTGCAAGCACGCCAAAAGAAAGACCGTCACCACC 195339
Query 16640 ATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAA 16699
||||| |||||||| || |||||||| ||||| | | | || || || ||| | |||
Sbjct 195338 ATGGACATCGTCTACGCTTTGAAACGCCAAGGAAGAACTCTGTACGGATTCGGAGGATAA 195279
Query 16700 TCTTCT 16705
| ||||
Sbjct 195278 TTTTCT 195273
Score = 120 bits (132), Expect = 5e-23
Identities = 171/241 (71%), Gaps = 0/241 (0%)
Strand=Plus/Plus
Query 16465 CATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCG 16524
|||| ||| |||||| ||||||| ||||| ||||| || | | ||||||||||| ||
Sbjct 187223 CATCGAAGAAATCACAGAGCCAGCCATCCGCCGTCTCGCCAGAAGAGGTGGAGTCAAACG 187282
Query 16525 TGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584
| |||||| | | || || || | |||| || |||||| | || || | | |||
Sbjct 187283 CATTTCTGGACTCATTTACGAGGAAACCCGTGGAGTCTTGAAGGTGTTTCTTGAAAACGT 187342
Query 16585 TATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||| || || || ||| ||||||||| || | |||||||||||| |||||||
Sbjct 187343 CATCCGCGACGCCGTCACCTACTGCGAGCACGCCAAGAGAAAGACTGTCACCGCCATGGA 187402
Query 16645 TATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATCTTC 16704
| ||||| || |||||||| ||||| | | | || || || ||| | |||| |||
Sbjct 187403 CGTTGTCTACGCTTTGAAACGCCAAGGAAGAACCCTGTACGGATTCGGAGGATAATTTTC 187462
Query 16705 T 16705
|
Sbjct 187463 T 187463
>seq862
Length=51720
Score = 159 bits (176), Expect = 5e-35
Identities = 199/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | |||||| || |||||||||||||||||||||||||| |||
Sbjct 39635 GCCAAGCGCCATCGCAAAGTTCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCGATC 39576
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| || | |||||| | | || || || |
Sbjct 39575 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGCATTTCTGGACTCATTTACGAGGAAACC 39516
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 39515 CGTGGAGTCCTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 39456
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | |||||||||||| | ||||| | ||||| || |||||||| |||||
Sbjct 39455 CACGCCAAAAGAAAGACTGTCACCGCTATGGACGTTGTCTACGCTTTGAAACGCCAAGGA 39396
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | || || || ||| | |||| ||||
Sbjct 39395 AGAACCCTGTACGGATTCGGAGGATAATTTTCT 39363
>seq350
Length=115401
Score = 159 bits (176), Expect = 5e-35
Identities = 199/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | |||||| || |||||||||||||||||||||||||| |||
Sbjct 14860 GCCAAGCGCCATCGCAAAGTTCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCGATC 14919
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| || | |||||| | | || || || |
Sbjct 14920 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGCATTTCTGGACTCATTTACGAGGAAACC 14979
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 14980 CGTGGAGTCCTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 15039
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | |||||||||||| | ||||| | ||||| || |||||||| |||||
Sbjct 15040 CACGCCAAAAGAAAGACTGTCACCGCTATGGACGTTGTCTACGCTTTGAAACGCCAAGGA 15099
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | || || || ||| | |||| ||||
Sbjct 15100 AGAACCCTGTACGGATTCGGAGGATAATTTTCT 15132
>seq341
Length=141093
Score = 159 bits (176), Expect = 5e-35
Identities = 199/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | |||||| || |||||||||||||||||||||||||| |||
Sbjct 123416 GCCAAGCGCCATCGCAAAGTTCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCCATC 123475
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| || | |||||| | | || || || |
Sbjct 123476 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGCATTTCTGGACTCATTTACGAGGAAACC 123535
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 123536 CGTGGAGTCCTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 123595
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | |||||||||||| | ||||| | ||||| || |||||||| |||||
Sbjct 123596 CACGCCAAAAGAAAGACTGTCACCGCTATGGACGTTGTCTACGCTTTGAAACGCCAAGGA 123655
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | || || || ||| | |||| ||||
Sbjct 123656 AGAACCCTGTACGGATTCGGAGGATAATTTTCT 123688
>seq470
Length=132382
Score = 154 bits (170), Expect = 2e-33
Identities = 198/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | |||||| || |||||||||||||||||||||||||| |||
Sbjct 4953 GCCAAGCGCCATCGCAAAGTTCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCGATC 5012
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| || | |||||| | | || || || |
Sbjct 5013 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGCATTTCTGGACTCATTTACGAGGAAACC 5072
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || |||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 5073 CGTGGAGTCCTGAAAGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 5132
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| ||| | |||||||||||| | ||||| | ||||| || |||||||| |||||
Sbjct 5133 CACGCCAAAAGAAAGACTGTCACCGCTATGGACGTTGTCTACGCTTTGAAACGCCAAGGA 5192
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | || || || ||| | |||| ||||
Sbjct 5193 AGAACCCTGTACGGATTCGGAGGATAATTTTCT 5225
>seq152
Length=518844
Score = 154 bits (170), Expect = 2e-33
Identities = 198/273 (73%), Gaps = 0/273 (0%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | |||||| || |||||||||||||||||||||||||| |||
Sbjct 506885 GCCAAGCGCCATCGCAAAGTTCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCGATC 506944
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| || | |||||| | | || || || |
Sbjct 506945 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGCATTTCTGGACTCATTTACGAGGAAACC 507004
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 507005 CGTGGAGTCCTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 507064
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672
||||| || | |||||||||||| | ||||| | ||||| || |||||||| |||||
Sbjct 507065 CACGCCAAGAGAAAGACTGTCACCGCTATGGACGTTGTCTACGCTTTGAAACGCCAAGGA 507124
Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCT 16705
| | | || || || ||| | |||| ||||
Sbjct 507125 AGAACCCTGTACGGATTCGGAGGATAATTTTCT 507157
>seq354
Length=147946
Score = 152 bits (168), Expect = 8e-33
Identities = 177/239 (74%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492
|| ||||| ||||||| | ||||| || |||||||||||||||||||||||||| |||
Sbjct 60778 GCCAAGCGCCATCGCAAAGTCCTTCGCGACAACATCCAAGGAATCACCAAGCCAGCGATC 60719
Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552
|| ||||| || | | || |||||||| || | |||||| | | || || || |
Sbjct 60718 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAACGCATTTCTGGACTCATTTACGAGGAAACC 60659
Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612
|||| || ||||| | ||||| | | ||| |||| || || || ||| ||||
Sbjct 60658 CGTGGAGTCCTGAAGGTGTTCCTTGAAAACGTCATCCGCGACGCCGTCACCTACTGCGAG 60599
Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| ||| | ||||| |||||| | ||||| |||| || || ||||||||||||||
Sbjct 60598 CACGCCAAAAGAAAGACCGTCACCGCTATGGACGTCGTTTACGCTTTGAAACGTCAAGG 60540
Score = 113 bits (124), Expect = 7e-21
Identities = 149/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Plus
Query 16465 CATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCG 16524
|||| |||||||||| |||||||| |||||||| || || | | || |||||||| ||
Sbjct 133411 CATCGAAGGAATCACAAAGCCAGCCATCCGTCGACTCGCCAGAAGAGGAGGAGTCAAACG 133470
Query 16525 TGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGT 16584
| || | ||||| ||||| | |||| ||| | | | | ||||| | | |||
Sbjct 133471 CATTTCAAACCTCGTCTACGAAGAAACCCGTGGAGTTCTCAGGGTTTTCCTTGAAAACGT 133530
Query 16585 TATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGA 16644
|||| || || || ||| ||||||||| || | |||||||||||| |||||||
Sbjct 133531 CATCCGCGACGCCGTCACCTACTGCGAGCACGCCAAGAGAAAGACTGTCACCACCATGGA 133590
Query 16645 TATCGTCTATGCATTGAAACGTCAAGG 16671
| ||||| || |||||||| |||||
Sbjct 133591 CGTTGTCTACGCTTTGAAACGCCAAGG 133617
>seq1412
Length=14199
Score = 145 bits (160), Expect = 1e-30
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 16482 AGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCT 16541
|||| || || |||||||| ||||||||||| || ||||| ||| | || || || |||
Sbjct 2128 AGCCGGCCATTCGTCGTCTTGCTCGTCGTGGAGGTGTCAAACGTATTTCCGGGCTGATCT 2069
Query 16542 ATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCC 16601
| ||||| | ||||| ||| | ||| | ||||| ||| |||||||| ||||||| ||
Sbjct 2068 ACGAAGAAACTCGTGGAGTTCTTAAGGTGTTCCTTGAGAACGTTATCCGTGATGCTGTCA 2009
Query 16602 ACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGA 16661
||| ||| ||||| || | ||||| |||||| | |||||| ||||||| || ||||
Sbjct 2008 CTTATTGCGAACACGCAAAGAGAAAGACAGTCACCGCAATGGATGTCGTCTACGCTTTGA 1949
Query 16662 AACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATC 16701
|||| || ||| | | | || || || ||| | |||||
Sbjct 1948 AACGCCAGGGCAGAACTCTCTACGGATTCGGAGGATAATC 1909
>seq140
Length=419846
Score = 145 bits (160), Expect = 1e-30
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Minus
Query 16482 AGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCT 16541
|||| || || |||||||| ||||||||||| || ||||| ||| | || || || |||
Sbjct 282148 AGCCGGCCATTCGTCGTCTTGCTCGTCGTGGAGGTGTCAAACGTATTTCCGGGCTGATCT 282089
Query 16542 ATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCC 16601
| ||||| | ||||| ||| | ||| | ||||| ||| |||||||| ||||||| ||
Sbjct 282088 ACGAAGAAACTCGTGGAGTTCTTAAGGTGTTCCTTGAGAACGTTATCCGTGATGCTGTCA 282029
Query 16602 ACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGA 16661
||| ||| ||||| || | ||||| |||||| | |||||| ||||||| || ||||
Sbjct 282028 CTTATTGCGAACACGCAAAGAGAAAGACAGTCACCGCAATGGATGTCGTCTACGCTTTGA 281969
Query 16662 AACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAATC 16701
|||| || ||| | | | || || || ||| | |||||
Sbjct 281968 AACGCCAGGGCAGAACTCTCTACGGATTCGGAGGATAATC 281929
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79072178215365
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |