Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_006820.1 Length=196280 Score E Sequences producing significant alignments: (Bits) Value seq1827 82.4 1e-10 >seq1827 Length=14047 Score = 82.4 bits (90), Expect = 1e-10 Identities = 64/75 (85%), Gaps = 1/75 (1%) Strand=Plus/Minus Query 122998 ATGCGGGTGTAGTTCAGTGGTAGAACGCTATCCTTCCAAGTTAGATGTCGTCGGTTCGAG 123057 |||||||||||||||| ||||||||| || ||||||||| || || ||| ||||||| Sbjct 6588 ATGCGGGTGTAGTTCAATGGTAGAACTTTAGCCTTCCAAGCTA-ATAGCGTGGGTTCGAT 6530 Query 123058 TCCGATCACCCGCTT 123072 ||| ||||||||||| Sbjct 6529 TCCCATCACCCGCTT 6515 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 627942057072000