Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_008725.1 Length=111953 Score E Sequences producing significant alignments: (Bits) Value seq19 82.4 5e-11 >seq19 Length=917137 Score = 82.4 bits (90), Expect = 5e-11 Identities = 155/228 (68%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 21834 ATGCAAATATTTATTAAAACATTAACGGGCAAAACCATTACCGTGGAAACGGAAGCCGCA 21893 |||||||| || | ||||| || || || |||||||| ||| |||| ||| || | Sbjct 766719 ATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACCATCACCCTGGAGGTGGAGGCTTCC 766660 Query 21894 GAAACGGTGGCCGATCTTAAGCAAAAAATTGCCGATAAAGAGGGTGTACCTGTAAACCAA 21953 || || | | || | ||| || || ||||| ||||| | || | ||||| Sbjct 766659 GACACCATCGAGAATGTCAAGGCCAAGATCCAGGATAAGGAGGGAATTCCACCAGACCAA 766600 Query 21954 CAGAGACTTATCTTTGCTGGCAAACAACTAGAAGATTTAAAAACTATGGCCGATTACAAT 22013 || | || ||||| || || || || || || ||| | ||| || | || ||||| Sbjct 766599 CAACGTCTCATCTTCGCCGGAAAGCAGCTCGAGGATGGACGGACTCTGTCTGACTACAAC 766540 Query 22014 ATTCAGAAGGAATCTACTCTTCATATGGTATTACGTTTACGAGGAGGA 22061 || |||||||| |||||||||||| | || | ||| | || |||||| Sbjct 766539 ATCCAGAAGGAGTCTACTCTTCATCTCGTTCTTCGTCTCCGCGGAGGA 766492 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 358110374844970