Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq24 159 8e-34 seq19 158 3e-33 seq157 132 1e-25 seq156 132 1e-25 seq314 107 5e-18 seq7 98.7 2e-15 >seq24 Length=791117 Score = 159 bits (176), Expect = 8e-34 Identities = 181/243 (74%), Gaps = 5/243 (2%) Strand=Plus/Plus Query 288236 TTCATACATGTC-----CACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTG 288290 ||||| |||||| | || ||||| | ||| || | |||| || ||| ||||| Sbjct 463165 TTCATGCATGTCTTGCCCTCCACGGAGACGAAGGACCAAGTGAAGGGTAGATTCCTTTTG 463224 Query 288291 GATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACG 288350 || |||||||||| ||| ||||| || || || ||||| ||||| |||||||| || | Sbjct 463225 AATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAATTGCTTTCCGGCGAAGATGAGTCT 463284 Query 288351 CTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGA 288410 || || |||||||||||| ||||||||||| || || |||||||| || || | Sbjct 463285 TTGCTGGTCTGGTGGGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTTCTCAATGGT 463344 Query 288411 ATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTG 288470 ||| | | | |||||||| ||||| ||||| || || |||||||||||||| ||||| Sbjct 463345 ATCAGAGGCTCCGACTTCGAGAGTGATAGTCTTTCCAGTGAGAGTCTTGACGAAAATCTG 463404 Query 288471 CAT 288473 ||| Sbjct 463405 CAT 463407 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || |||||||||| ||| ||||| || || || ||||| ||||| ||||| Sbjct 463845 TTCCTTTTGAATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAATTGCTTTCCGGCGAA 463904 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||| || | || || |||||||||||| ||||||||||| || || |||||||| Sbjct 463905 GATGAGTCTTTGCTGGTCTGGTGGGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 463964 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| | | | |||||||| ||||| ||||| || || ||||||||||| Sbjct 463965 CTCAATGGTATCAGAGGCTCCGACTTCGAGAGTGATAGTCTTTCCAGTGAGAGTCTTGAC 464024 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 464025 GAAAATCTGCAT 464036 >seq19 Length=917137 Score = 158 bits (174), Expect = 3e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 288247 CCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCG 288306 || || ||||| | || |||||||||| ||| ||| |||||||| || || |||| | Sbjct 764561 CCTCCACGGAGACGGAGGACGAGATGAAGGGTGGATTCCTTTTGGATGTTGTAATCGGAG 764620 Query 288307 AGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGG 288366 || ||||| || || || ||||| ||||| |||||||| || | || || |||| Sbjct 764621 AGAGTGCGGCCATCCTCCAATTGCTTTCCGGCGAAGATGAGTCTTTGCTGGTCTGGTGGG 764680 Query 288367 ATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACT 288426 |||||||| || || ||||| || || || |||||||| || | ||| | ||| ||| Sbjct 764681 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACGTTTTCAATGGTGTCGGAGGCTTCGACT 764740 Query 288427 TCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || | ||||| ||||| ||||||| |||||||||||| |||||||| Sbjct 764741 TCCAAGGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCAT 764787 Score = 152 bits (168), Expect = 1e-31 Identities = 149/192 (78%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288282 TTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAA 288341 ||| ||||| || |||||||||| ||| ||||| || || || ||||| ||||| ||||| Sbjct 765335 TTCCTTTTGAATGTTATAGTCGGAGAGGGTGCGACCATCCTCCAATTGCTTTCCAGCGAA 765394 Query 288342 GATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTT 288401 ||||| | || || |||||||||||| ||||||||||| || || |||||||| Sbjct 765395 GATCAATCTTTGCTGGTCTGGTGGGATTCCTTCCTTATCCTGGATCTTGGCCTTCACGTT 765454 Query 288402 TTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGAC 288461 || || | ||| | ||| || ||||| ||||| ||||| || || ||||||||||| Sbjct 765455 CTCAATGGTATCAGAGGCTTCGACCTCGAGAGTGATAGTCTTTCCAGTGAGAGTCTTGAC 765514 Query 288462 GAATATCTGCAT 288473 ||| |||||||| Sbjct 765515 GAAAATCTGCAT 765526 Score = 132 bits (146), Expect = 1e-25 Identities = 157/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 288262 AGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCT 288321 || || | ||||| ||| || ||||||||||| || || | || || | ||| || Sbjct 765543 AGCACCAAATGAAGAGTGGACTCCTTTTGGATATTGTAATCCGAAAGAGTTCTTCCATCC 765602 Query 288322 TCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCC 288381 || ||||| ||||| |||||||| ||||| || ||| ||| ||||| || || || Sbjct 765603 TCCAATTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGTGGAATTCCCTCCTTGTCT 765662 Query 288382 TGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTC 288441 |||||||| || || |||||||| || | ||| | ||| ||||| | ||||| ||| Sbjct 765663 TGGATTTTAGCCTTGACGTTTTCAATGGTGTCGGAGGCTTCGACTTCCAAGGTGATGGTC 765722 Query 288442 TTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || || || ||||||||||| ||||||||| Sbjct 765723 TTTCCAGTGAGGGTCTTGACGAAGATCTGCATT 765755 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || || ||||| || ||||| | || || | ||| || || ||||| ||||| |||||| Sbjct 764369 TCCTTCTGGATGTTGTAGTCCGAAAGAGTTCTTCCATCCTCCAATTGCTTTCCAGCGAAG 764428 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || ||||| || ||| ||||||||| || || || || || || || ||||||||| Sbjct 764429 ATGAGACGTTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGCCTTCACGTTT 764488 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | || |||||||| ||||| ||||| || |||| ||||||||| Sbjct 764489 TCAATGGTGTCGGAAGCCTCAACTTCGAGGGTGATGGTCTTTCCAGTCAAGGTCTTGACG 764548 Query 288463 AATATCTGCAT 288473 || |||||||| Sbjct 764549 AAGATCTGCAT 764559 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || ||||| | | |||||||| || || || || ||||| |||||| Sbjct 766073 TCCTTTTGAATGTTGTAGTCAGACAATGTGCGTCCATCCTCCAACTGCTTTCCGGCGAAG 766132 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | ||| ||| ||||||||| || || || || || || ||||| || ||| Sbjct 766133 ATGAGTCTCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGCTTTGACATTT 766192 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | ||| | ||| ||||| || ||||| ||||| ||||| ||||||||||| Sbjct 766193 TCGATTGTGTCGGAAGCTTCGACTTCAAGTGTGATAGTCTTTCCGGTGAGAGTCTTGACA 766252 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 766253 AAGATCTGCATT 766264 Score = 120 bits (132), Expect = 7e-22 Identities = 165/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 288246 TCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGTCGGC 288305 ||| |||||||| | ||| |||||||||| || || || ||||| || ||||| | Sbjct 766492 TCCTCCGCGGAGACGAAGAACGAGATGAAGAGTAGACTCCTTCTGGATGTTGTAGTCAGA 766551 Query 288306 GAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGG 288365 || || ||||| || || | || ||||| |||||||| ||||| ||||| ||| Sbjct 766552 CAGAGTCCGTCCATCCTCGAGCTGCTTTCCGGCGAAGATGAGACGTTGTTGGTCTGGTGG 766611 Query 288366 GATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTAC 288425 ||||| || ||||||||||| || || || || || || || | ||| | || || Sbjct 766612 AATTCCCTCCTTATCCTGGATCTTGGCCTTGACATTCTCGATGGTGTCGGAAGCCTCCAC 766671 Query 288426 TTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATTAT 288476 || || ||||| || || || |||| || |||||||| || ||||| || Sbjct 766672 CTCCAGGGTGATGGTTTTTCCAGTCAACGTTTTGACGAAGATTTGCATGAT 766722 Score = 107 bits (118), Expect = 5e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || ||||| || || || |||| | ||||| || || || | |||||||| |||||| Sbjct 766301 TCCTTTTGAATGTTGTAATCGGACAAGGTGCGGCCATCCTCGAGCTGTTTTCCGGCGAAG 766360 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 || || | || || |||||||||||| || || ||||| || ||||| || || Sbjct 766361 ATGAGTCTTTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCTTTAACATTC 766420 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | || | || ||||| || ||||| ||||| ||||| ||||||||||| Sbjct 766421 TCGATGGTGTCAGAAGCCTCGACTTCAAGTGTGATAGTCTTTCCGGTGAGAGTCTTGACA 766480 Query 288463 AATATCTGCATT 288474 || ||||||||| Sbjct 766481 AAGATCTGCATT 766492 Score = 95.1 bits (104), Expect = 3e-14 Identities = 88/112 (79%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 288363 TGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTC 288422 |||||||||||| || |||||||| || ||||| ||||| || || | |||| | || Sbjct 765925 TGGGATTCCTTCCTTGTCCTGGATCTTGGCTTTGACGTTCTCAATGGTATCGGAAGCCTC 765984 Query 288423 TACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 ||||| || ||||| ||||| ||||| || ||||| ||||| || |||||| Sbjct 765985 GACTTCAAGAGTGATGGTCTTTCCGGTGAGGGTCTTCACGAAGATTTGCATT 766036 Score = 91.5 bits (100), Expect = 3e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 288331 TTTCCTGCGAAGATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTC 288390 || || || ||||| ||||| |||||| |||||||||||| || || || || || Sbjct 765156 TTACCGGCAAAGATAAGACGTTGTTGATCTGGTGGGATTCCTTCCTTGTCTTGAATCTTG 765215 Query 288391 GCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTC 288450 || || || || || || | ||| | || ||||| | ||||| ||||| |||||| Sbjct 765216 GCCTTGACATTCTCAATGGTGTCGGAGGCCTCGACTTCCAAGGTGATGGTCTTTCCGGTC 765275 Query 288451 AGAGTCTTGACGAATATCTGCAT 288473 | |||||||||||| |||||||| Sbjct 765276 AAAGTCTTGACGAAGATCTGCAT 765298 >seq157 Length=243809 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||||| ||| || ||||| || || | ||| ||||| |||||| Sbjct 218177 TCCTTTTGGATGTTGTAGTCGGAGAGAGTACGTCCATCCTCGAGTTGCTTTCCGGCGAAG 218118 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| ||| |||||||| || || ||||| || || || || || Sbjct 218117 ATCAGTCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTC 218058 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| | || |||||||| || || ||||| || ||||||||||||||| Sbjct 218057 TCGATGGTATCGGAGGCCTCGACTTCGAGGGTAATAGTCTTACCCGTCAGAGTCTTGACG 217998 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 217997 AAGATTTGCAT 217987 >seq156 Length=445966 Score = 132 bits (146), Expect = 1e-25 Identities = 144/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 288283 TCTTTTTGGATATTATAGTCGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAG 288342 || |||||||| || ||||||| ||| || ||||| || || | ||| ||||| |||||| Sbjct 424370 TCCTTTTGGATGTTGTAGTCGGAGAGAGTACGTCCATCCTCGAGTTGCTTTCCGGCGAAG 424429 Query 288343 ATCAGACGCTGTTGAGAATCTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTT 288402 ||||| | || ||| ||| |||||||| || || ||||| || || || || || Sbjct 424430 ATCAGTCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTC 424489 Query 288403 TCTATAGAATCGCTCGATTCTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACG 288462 || || | |||| | || |||||||| || || ||||| || ||||||||||||||| Sbjct 424490 TCGATGGTATCGGAGGCCTCGACTTCGAGGGTAATAGTCTTACCCGTCAGAGTCTTGACG 424549 Query 288463 AATATCTGCAT 288473 || || ||||| Sbjct 424550 AAGATTTGCAT 424560 >seq314 Length=102929 Score = 107 bits (118), Expect = 5e-18 Identities = 147/200 (74%), Gaps = 4/200 (2%) Strand=Plus/Minus Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476 |||||||| | || || |||||||||||||| ||||| ||||| || | || || ||| Sbjct 4092 CAAGCGTCCACATCGGAATTGTATGGAAAAGTACAAGAGATTCCACAAAGTGAGAAGACT 4033 Query 72477 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGT-AA 72535 || || ||||| || || |||| ||| || ||| |||| | || ||||| ||| Sbjct 4032 CCATTCTATCCAAGATCTCCATACGCTGTCGCCAAGATGTATGGATACTGGAT-TGTGGT 3974 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 72594 || || |||||| | |||||||||| | |||||| | || || | |||||||| |||| Sbjct 3973 CAACTATCGTGAGGCCTATAACATGTTCGCATGCAA-TGGAATTCTCTTCAATCATGAGA 3915 Query 72595 GTCCCAACAGAGGCCATCAG 72614 |||| ||||| ||||| Sbjct 3914 GTCCACGTAGAGGTAATCAG 3895 Score = 105 bits (116), Expect = 2e-17 Identities = 137/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476 |||||||| | || || |||||||||||||| ||||| ||||| || | || || ||| Sbjct 40039 CAAGCGTCCACATCGGAATTGTATGGAAAAGTACAAGAGATTCCACAAAGTGAGAAGACT 39980 Query 72477 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGT-AA 72535 || || ||||| || || |||| ||| || ||| |||| | || ||||| ||| Sbjct 39979 CCATTCTATCCAAGATCTCCATACGCTGTCGCCAAGATGTATGGATACTGGAT-TGTGGT 39921 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 72594 || || |||||| | |||||||||| | |||||| | || || | |||||||| |||| Sbjct 39920 CAACTATCGTGAGGCCTATAACATGTTCGCATGCAA-TGGAATTCTCTTCAATCATGAGA 39862 Query 72595 GTCC 72598 |||| Sbjct 39861 GTCC 39858 Score = 102 bits (112), Expect = 2e-16 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476 |||||||| | || || || ||||||||||| ||||| ||||| || | || || ||| Sbjct 18876 CAAGCGTCCACATCGGAATTATATGGAAAAGTACAAGAGATTCCACAAAGTGAGAAGACT 18817 Query 72477 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGT-AA 72535 || || ||||| || || |||| ||| || ||| |||| | || ||||| ||| Sbjct 18816 CCATTCTATCCAAGATCTCCATACGCTGTCGCCAAGATGTATGGATACTGGAT-TGTGGT 18758 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 72594 || || |||||| | |||||||||| | |||||| | || || | |||||||| |||| Sbjct 18757 CAACTATCGTGAGGCCTATAACATGTTCGCATGCAA-TGGAATTCTCTTCAATCATGAGA 18699 Query 72595 GTCC 72598 |||| Sbjct 18698 GTCC 18695 Score = 102 bits (112), Expect = 2e-16 Identities = 136/184 (74%), Gaps = 4/184 (2%) Strand=Plus/Minus Query 72417 CAAGCGTCTTCGTCAGAGTTGTATGGAAAAGTGCAAGAAATTCCTCAGACGGAAAATACT 72476 ||||| || | || || |||||||||||||| ||||| ||||| || | || || ||| Sbjct 54412 CAAGCATCCACATCGGAATTGTATGGAAAAGTACAAGAGATTCCGCAAAGTGAGAAGACT 54353 Query 72477 CCGTTTTATCCTCGAAGCCCTTACGGTGTTGCAAAGTTGTACGCTTATTGGATCTGT-AA 72535 || || ||||| || || |||| ||| || ||| |||| | || ||||| ||| Sbjct 54352 CCATTCTATCCAAGATCTCCATACGCTGTCGCCAAGATGTATGGATACTGGAT-TGTGGT 54294 Query 72536 AAATTACCGTGAGTCGTATAACATGTATGTATGCAACTCGATTTGT-TTCAATCACGAGA 72594 || || |||||| | |||||||||| | |||||| | || || | |||||||| |||| Sbjct 54293 CAACTATCGTGAGGCCTATAACATGTTCGCATGCAA-TGGAATTCTCTTCAATCATGAGA 54235 Query 72595 GTCC 72598 |||| Sbjct 54234 GTCC 54231 >seq7 Length=1891389 Score = 98.7 bits (108), Expect = 2e-15 Identities = 139/193 (72%), Gaps = 2/193 (1%) Strand=Plus/Minus Query 269149 ATGATCGGTATGAA-TGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTAT 269207 |||||||| ||||| || || ||||||| || || || || ||||| || |||| | Sbjct 174090 ATGATCGGAATGAACTGTCG-TCTCATGTCGCAGTACATTGAGTTCGTCGCGGATCACTT 174032 Query 269208 CTTCACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGA 269267 || | | ||||| | || || ||| ||| |||||| || |||| ||| ||||| Sbjct 174031 GCTCGCCGAGCTCGGATGCGACAAGTTGTTCAAGGTGAAGAACCCATTCGACTTCATGGA 173972 Query 269268 ACTAATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTATCAACG 269327 || || |||| |||||||| ||||||||||| ||||| ||| ||| || || || Sbjct 173971 GAACATCTCCATCGATGGAAAGACCAACTTCTTCGAGAAGCGCGTCTCCGAGTACCAGCG 173912 Query 269328 TCCTGGTGTAATG 269340 ||| ||||| ||| Sbjct 173911 TCCAGGTGTTATG 173899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179604447165790