Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq27 82.4 5e-11 >seq27 Length=943554 Score = 82.4 bits (90), Expect = 5e-11 Identities = 75/95 (79%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 42551 GGTCCGCCGTGTTCTTTATGAAAAGGATTAAAATGTTCACCAGCCGATGTACATCCATTG 42610 ||||| || || ||| | | | ||||||||||| ||||||||| |||||||||||| Sbjct 771388 GGTCCACCATGAGTTTTTTCAGATGGATTAAAATGAGGACCAGCCGAAGTACATCCATTG 771447 Query 42611 GTGGTATCTCCAAATTCATGTATATGAAAACCGTG 42645 |||| || ||| ||| ||| |||||||| ||||| Sbjct 771448 GTGGAGTCGCCATATTGATGGATATGAAATCCGTG 771482 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347355608061065