Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq20 253 3e-62 seq2096 251 9e-62 seq635 251 9e-62 seq3204 246 4e-60 seq2720 159 4e-34 seq17 136 5e-27 seq27 111 2e-19 seq486 86.0 8e-12 seq178 86.0 8e-12 seq18 84.2 3e-11 >seq20 Length=1193859 Score = 253 bits (280), Expect = 3e-62 Identities = 659/985 (67%), Gaps = 31/985 (3%) Strand=Plus/Plus Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TT 7176 ||||| ||||| || | ||| ||||| || |||||||| | |||| || | | | | || Sbjct 141982 TGAATCTTCGGAATCCTTGTAGATCCTCCCACCAAAACAACCTCAT-CAATCTTGCTCTT 142040 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 ||| ||||||| || ||||| | ||| || ||||| |||| | || | ||| | ||| Sbjct 142041 ATCCATCTTTGCATCACGAAGAGATTTCTCAACAGGCTCCAAAGTCTTTCTGAAGAGGTC 142100 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 ||| || |||||||| | ||||| || || | |||||||| | || ||| | Sbjct 142101 AGCACAAAGCTCCTCAAATCTGGCACGAGTGATCTTCGAGTAGAAATCTGCTCCATCGAA 142160 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCG 7353 |||||||| | || | || | | |||| || || || |||| ||| || || Sbjct 142161 CAACGAATCCACCTCTACAGTAGCCT---CCGTGGAGCTTGACAATGTTCTCTTGGCACG 142217 Query 7354 CTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATG 7413 ||||| || || || | ||| || | |||||| || || ||| ||||| || | Sbjct 142218 TTCACATGCGGTACGAAGACGTCGGATGGCACGTGGATTTGGGGAGATATCCTTTCCAGT 142277 Query 7414 TTTACGTTTAAACTCT-TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCAC 7472 || | |||||||| ||| |||||| | || | || ||||| || ||||| || | Sbjct 142278 CTTCCTCTTAAACTCAGTCAT-GAAGTGCTGGAGCATTCGAGAATCAAAGTCTTCTCCTC 142336 Query 7473 CCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT--AA 7530 | | || || || || || || | | | ||||| ||||| ||||||| | | || Sbjct 142337 CAAGATGAGTGTCTCCAGCAGTGGATCTCACTTCGAAGATTGATCCTTCAGCGATGGAAA 142396 Query 7531 CAACGAA-ACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-G 7588 || | | ||||| || ||||| ||||||| ||||| || || || ||| | || || | Sbjct 142397 GAATGGAGACATCGAATGTACCTCCACCCAAATCAAAGATCAGAACATTCTTCTCCTCAG 142456 Query 7589 TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 | || | || ||||| || || || | ||| || || ||||| ||||| ||||| | Sbjct 142457 TGATTCCT-TTGTCGAGTCCATAAGCAAGAGCAGCGGCAGTTGGCTCATTGATAATTCTC 142515 Query 7649 AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 | |||| ||||||||||| || ||||| || ||||| || ||||| ||| || Sbjct 142516 ATTGCATTCAATCCAGCAATAGTGGCAGCATCCTTTGTCGCCTGACGTTGACTATCATTG 142575 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 || ||||| || || || | || || | | |||| | | || ||||| | || || Sbjct 142576 AAATAGGCTGGCACAGTGATAACTGCATTCTTGACGGTATGTCCCAGATAGGTCTCTGCA 142635 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT 7828 | || ||||| || ||| ||||| | || ||||| || || |||| | | | Sbjct 142636 GTCTCCTTCATCTTCTGAAGTACCATTGCCGATATCTCCTCCGCATTGAACTCTCTTCTC 142695 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCC--GCAGCACCGGGGATAACCTTAT 7886 || || |||| ||||| || | | ||||| ||| | || | || || Sbjct 142696 TCTCCTTTAACCTCAACCTCTACAACTGGTTT-TCCTTGTTTTGCC----TTCACTTTGA 142750 Query 7887 ACGACCAATCTTTCATATCGTCTTGGACCTGTTGGTC--CGAAAACTTTCTTCCGATAAG 7944 | | ||||| || ||||| ||| || || || ||||| |||||||||||| Sbjct 142751 ATGGCCAATGCTTGATATCCGATTGAACAGTTTCCTCATCGAAA--CGTCTTCCGATAAG 142808 Query 7945 ACGCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTC 8004 ||| ||||| || ||||||||||| | || || ||| | ||| | || || ||||| Sbjct 142809 ACGTTTTGCGTCGAAAACTGTGTTCTCTGGATTACGGGCGGCTTGATCTTTGGCAGCGTC 142868 Query 8005 CCCGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT-TCGATTCC 8063 |||| ||||||||| || || || || || ||||| |||||||| || | | |||| Sbjct 142869 TCCGACTAGACGTTCAGTA---TCTGTGAATGCCACGTAGGATGGGGTGGTCTTGTTTCC 142925 Query 8064 CTTGGTCGTTCGCAATAATTTCTAC 8088 | || ||| || | |||||| || Sbjct 142926 ATCGG-AGTTGGCGAGAATTTCGAC 142949 >seq2096 Length=3354 Score = 251 bits (278), Expect = 9e-62 Identities = 513/752 (68%), Gaps = 14/752 (2%) Strand=Plus/Minus Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 ||||| || || | || || ||||| || |||||||||| ||||| | || |||||| Sbjct 2520 TGAATCTTTGGAACACGAGTTGATCCTCCAACCAAAACGACTTCATCAATCTTTGATTTA 2461 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237 |||| |||| ||||||||| | || || || ||||| | | || ||||| ||||| Sbjct 2460 TCGAGTTTTGCGTCTCGAAGAGCCTTCTCAACTGGTTCGAGAGTCTTTCGGAATAAGTCA 2401 Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297 ||||| ||| || || || ||||| || || | | | ||||| | || ||| | Sbjct 2400 GCACACAATTCTTCGAATCGAGCACGAGTTATCTTGGAACACAAATCGATTCCTTCGAAG 2341 Query 7298 AACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCGC 7354 | ||||||| ||||| || || ||| ||| || | |||| ||| || || Sbjct 2340 AGTGAATCAACTTCAACACATGCTT---CCGATGAACTTGAAAGAGTTCTCTTGGCACGT 2284 Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414 ||||| || ||||| | ||| | | |||||| || || || ||||| || | Sbjct 2283 TCACAAGCAGTTCGAAGACGTCTGATGGCACGTGGATTTGGAGAGATATCCTTTCCAGTC 2224 Query 7415 TTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACC 7473 || ||||| ||||| |||| ||||||| |||| | || ||| || ||||| || || Sbjct 2223 TTCCGTTTGAACTCATTCAT-GAAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCC 2165 Query 7474 CAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT--AAC 7531 | || ||||| || || || | ||| ||||| || || ||||||| || || Sbjct 2164 AAGATGAGTATCTCCAGCAGTTGATTTCACTTCGAATATCGATCCTTCAGCAATTGAAAG 2105 Query 7532 AAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC 7590 || |||||||| || ||||| || || || ||||| || | ||| ||| | || || | Sbjct 2104 AATTGAAACATCGAATGTACCTCCTCCAAGATCAAAGATCAATACATTCTTCTCTTCA-C 2046 Query 7591 TTTGTTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 || | ||| ||| | || || || | ||| || || ||||||||||| || || |||| Sbjct 2045 TTATTCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGTTGGTTCATTGATGATTCGAA 1986 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 |||| |||||||| ||||| |||||||| || ||||||| ||| || || | Sbjct 1985 TTGCATTCAATCCAGCAATCGTTGCTGCATCTTTTGTTGCTTGTCTTTGACTGTCATTGA 1926 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 |||| || || || || | || || || | ||| | | || || || | || || Sbjct 1925 AGTATGCAGGTACAGTAATCACTGCATCTTTCACTGTATGTCCAAGGTATGTCTCTGCAG 1866 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829 | || ||||| || ||| ||||| | ||| || ||||| | || || ||| ||| Sbjct 1865 TTTCCTTCATCTTCTGAAGTACCATTGCTGAGATTTCTTCTGGATTGAATTGCTTCTTTT 1806 Query 7830 CACCGTTAAAATCAACTTCAATCA-TGGGTTT 7860 | || || || ||||||||||||| ||| ||| Sbjct 1805 CTCCTTTCAATTCAACTTCAATCACTGGCTTT 1774 Score = 174 bits (192), Expect = 2e-38 Identities = 357/522 (68%), Gaps = 8/522 (2%) Strand=Plus/Plus Query 7345 CTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATC 7404 ||| || || ||||| || ||||| | ||| | | |||||| || || || ||||| Sbjct 103 CTTGGCACGTTCACAAGCAGTTCGAAGACGTCTGATGGCACGTGGATTTGGAGAGATATC 162 Query 7405 TTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAAT 7463 || | || ||||| ||||| |||| ||||||| |||| | || ||| || | Sbjct 163 CTTTCCAGTCTTCCGTTTGAACTCATTCAT-GAAGTGTTGAAGCATTCGTTGATCAAAGT 221 Query 7464 CTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAA 7523 |||| || || | || ||||| || || || | ||| ||||| || || ||||||| Sbjct 222 CTTCTCCTCCAAGATGAGTATCTCCAGCAGTTGATTTCACTTCGAATATCGATCCTTCAG 281 Query 7524 TGTTT--AACAAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCG 7580 || || || |||||||| || ||||| || || || ||||| || | ||| ||| Sbjct 282 CAATTGAAAGAATTGAAACATCGAATGTACCTCCTCCAAGATCAAAGATCAATACATTCT 341 Query 7581 TATCGTCGTCTTTGTTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTA 7639 | || || ||| | ||| ||| | || || || | ||| || || ||||||||||| Sbjct 342 TCTCTTCA-CTTATTCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGTTGGTTCATTG 400 Query 7640 ATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGC 7699 || || |||| |||| |||||||| ||||| |||||||| || ||||||| ||| Sbjct 401 ATGATTCGAATTGCATTCAATCCAGCAATCGTTGCTGCATCTTTTGTTGCTTGTCTTTGA 460 Query 7700 GAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC 7759 || || ||||| || || || || | || || || | ||| | | || || || Sbjct 461 CTGTCATTGAAGTATGCAGGTACAGTAATCACTGCATCTTTCACTGTATGTCCAAGGTAT 520 Query 7760 GATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAAC 7819 | || || | || ||||| || ||| ||||| | ||| || ||||| | || Sbjct 521 GTCTCTGCAGTTTCCTTCATCTTCTGAAGTACCATTGCTGAGATTTCTTCTGGATTGAAT 580 Query 7820 TGTTTCGTTTCACCGTTAAAATCAACTTCAATCA-TGGGTTT 7860 || ||| |||| || || || ||||||||||||| ||| ||| Sbjct 581 TGCTTCTTTTCTCCTTTCAATTCAACTTCAATCACTGGCTTT 622 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCT 6685 || |||| ||||| ||||| ||| || ||||| | ||||| || | | ||||| Sbjct 3069 GACAATCGTCCCTTCTCATTTCGAATTGTGATCTTATTCGATTTTCCAGTTGATTTATCC 3010 Query 6686 TCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGT 6745 |||| ||||||| ||| ||||||||||| | ||| || | |||| ||||||||| Sbjct 3009 ACAGCTGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTGACATCAATTTGTGGA 2950 Query 6746 GTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCC 6805 ||| | || || | |||||| || | || || || || || || | ||||| Sbjct 2949 ACACCACGTGGAGCTGGTGGAATTCCAGACAATTCGAAAGTTCCGAGACGATGATTATCA 2890 Query 6806 GTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATC 6861 | | | |||||| ||||| || |||| |||| || |||||||||| || Sbjct 2889 CGAGTCATGGCACGTTCTCCTTCGTAAACTTGGATTGAAACTCCAGGTTGATTGTC 2834 >seq635 Length=48557 Score = 251 bits (278), Expect = 9e-62 Identities = 634/949 (67%), Gaps = 25/949 (3%) Strand=Plus/Plus Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGAT-TT 7176 ||||| ||||| |||| ||| ||||| || |||||||| | |||| || | | | | || Sbjct 41956 TGAATCTTCGGAATTCTTGTGGATCCTCCCACCAAAACAACCTCAT-CAATCTTGCTCTT 42014 Query 7177 ATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTC 7236 ||| ||||||| || ||||| | |||||| ||||| |||| || | ||| | ||| Sbjct 42015 ATCCATCTTTGCATCACGAAGAGATTTTTCAACAGGCTCCAATGTCTTTCTGAAGAGGTC 42074 Query 7237 CATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTA 7296 ||| || |||||||| | ||||| || || | ||||| ||| | || ||| | Sbjct 42075 AGCACAAAGCTCCTCAAATCTGGCACGAGTGATCTTCGAGTAGAAGTCAGCTCCATCGAA 42134 Query 7297 TAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCG 7353 |||||||| | || | || | | | || || || || |||| |||||| || Sbjct 42135 CAACGAATCCACCTCTACAGTAGCCT---CAGTGGAGCTTGACAAGGTTCTCTTTGCACG 42191 Query 7354 CTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATG 7413 ||||| || || || | ||| || | |||||| || || ||||||||||| | Sbjct 42192 TTCACATGCAGTACGAAGACGTCGGATGGCACGTGGATTCGGAGAAATATCTTTTCCAGT 42251 Query 7414 TTTACGTTTAAACTCT-TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCAC 7472 || | |||||||| ||| ||||||| |||| | || ||||| || ||||| || | Sbjct 42252 CTTCCTCTTAAACTCAGTCAT-GAAGTGTTGAAGCATTCGAGAATCAAAGTCTTCTCCTC 42310 Query 7473 CCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCA---ATGTTTA 7529 | | || || || || || || | | | ||||| || || ||||||| ||| | Sbjct 42311 CAAGATGAGTGTCTCCAGCAGTGGATCTCACTTCGAAAATTGATCCTTCAGCGATGGAAA 42370 Query 7530 ACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-G 7588 | || ||||| || ||||| || |||| |||||| || || || ||| | || || | Sbjct 42371 GGATGGATACATCGAAAGTACCTCCTCCCAAGTCAAAGATCAGAACATTCTTCTCCTCAG 42430 Query 7589 TCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGA 7648 | || | || ||||| || || |||| ||| || || ||||| ||||| ||||| | Sbjct 42431 TGATTCCT-TTGTCGAGTCCATAAGCGAGAGCAGCGGCAGTTGGCTCATTGATAATTCTC 42489 Query 7649 AGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTA 7708 | |||| ||||||||||| || ||||| || || || || ||||| ||| || Sbjct 42490 ATTGCATTCAAACCAGCAATAGTGGCTGCATCCTTTGTAGCCTGACGTTGACTATCATTG 42549 Query 7709 AAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCG 7768 || || || || || || | || || | | |||| | | || ||||| | ||||| Sbjct 42550 AAATATGCTGGCACAGTGATAACTGCATTCTTGACGGTATGTCCCAGATAGGTCTCCGCA 42609 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT 7828 | || ||||| || || ||||||| || ||||| || || |||| | | | Sbjct 42610 GTCTCCTTCATCTTCTGGAGTACCATCGCCGATATCTCCTCCGCATTGAACTCTCTTTTC 42669 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATAC 7888 || || |||| ||||| || | | ||||| || | | | || || | Sbjct 42670 TCTCCTTTAACCTCAACCTCTACAACTGGTTT-TC--CTTGTTTTGCTTTCACTTTGAAT 42726 Query 7889 GACCAATCTTTCATATCGTCTTGGACCTGTTGGTC--CGAAAACTTTCTTCCGATAAGAC 7946 | ||||| ||| ||||| ||| || | || ||||| |||||||||||||| Sbjct 42727 GGCCAATGTTTGATATCTGATTGAACAGTCTCCTCATCGAAA--CGTCTTCCGATAAGAC 42784 Query 7947 GCTTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCC 8006 | || || || ||||||||||| | || || ||| | ||| | || || ||||| | Sbjct 42785 GTTTCGCGTCGAAAACTGTGTTCTCTGGATTACGGGCGGCTTGATCTTTGGCAGCGTCTC 42844 Query 8007 CGATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGT 8055 ||| ||||||||| || || || || || ||||| ||||| || || Sbjct 42845 CGACTAGACGTTCAGTA---TCAGTGAATGCCACGTAGGATGGAGTGGT 42890 >seq3204 Length=2066 Score = 246 bits (272), Expect = 4e-60 Identities = 512/752 (68%), Gaps = 14/752 (2%) Strand=Plus/Minus Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 ||||| || || | || || ||||| || |||||||||| ||||| | || |||||| Sbjct 1221 TGAATCTTTGGAACACGAGTTGATCCTCCAACCAAAACGACTTCATCAATCTTTGATTTA 1162 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237 |||| |||| |||||||| | || || || ||||| | | || ||||| ||||| Sbjct 1161 TCGAGTTTTGCATCTCGAAGAGCCTTCTCAACTGGTTCGAGAGTCTTTCGGAATAAGTCA 1102 Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297 ||||| ||| || || || ||||| || || | | | ||||| | || ||| | Sbjct 1101 GCACACAATTCTTCGAATCGAGCACGAGTTATCTTGGAACACAAATCGATTCCTTCGAAG 1042 Query 7298 AACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCGC 7354 | ||||||| ||||| || || ||| ||| || | |||| ||| || || Sbjct 1041 AGTGAATCAACTTCAACACATGCTT---CCGATGAACTTGAAAGAGTTCTCTTGGCACGT 985 Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414 ||||| || ||||| | ||| | | |||||| || || || ||||| || | Sbjct 984 TCACAAGCAGTTCGAAGACGTCTGATGGCACGTGGATTTGGAGAGATATCCTTTCCAGTC 925 Query 7415 TTACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACC 7473 || ||||| ||||| |||| ||||||| |||| | || ||| || ||||| || || Sbjct 924 TTCCGTTTGAACTCATTCAT-GAAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCC 866 Query 7474 CAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT--AAC 7531 | || ||||| || || || | ||| ||||| || || ||||||| || || Sbjct 865 AAGATGAGTATCTCCAGCAGTTGATTTCACTTCGAATATCGATCCTTCAGCAATTGAAAG 806 Query 7532 AAC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTC 7590 || |||||||| || ||||| || || || ||||| || | ||| ||| | || || | Sbjct 805 AATTGAAACATCGAATGTACCTCCTCCAAGATCAAAGATCAATACATTCTTCTCTTCA-C 747 Query 7591 TTTGTTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 || | ||| ||| | || || || | ||| || || ||||||||||| || || |||| Sbjct 746 TTATTCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGTTGGTTCATTGATGATTCGAA 687 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 |||| |||||||| ||||| |||||||| || ||||||| ||| || || | Sbjct 686 TTGCATTCAATCCAGCAATCGTTGCTGCATCTTTTGTTGCTTGTCTTTGACTGTCATTGA 627 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGA 7769 |||| || || || || | || || || | ||| | | || || || | || || Sbjct 626 AGTATGCAGGTACAGTAATCACTGCATCTTTCACTGTATGTCCAAGGTATGTCTCTGCAG 567 Query 7770 TATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTT 7829 | || ||||| || ||| ||||| | ||| || ||||| | || || ||| ||| Sbjct 566 TTTCCTTCATCTTCTGAAGTACCATTGCTGAGATTTCTTCTGGATTGAATTGCTTCTTTT 507 Query 7830 CACCGTTAAAATCAACTTCAATCA-TGGGTTT 7860 | || || || ||||||||||||| ||| ||| Sbjct 506 CTCCTTTCAATTCAACTTCAATCACTGGCTTT 475 Score = 86.0 bits (94), Expect = 8e-12 Identities = 185/277 (67%), Gaps = 0/277 (0%) Strand=Plus/Minus Query 6585 ACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAATCTCCCCTTATCAT 6644 ||| || ||| || | ||||| || || ||| | | || |||| ||||| |||| Sbjct 1811 ACTGTTTCGCTTCATTCACCATTCGATCGATATCTGCCTGTGACAATCGTCCCTTCTCAT 1752 Query 6645 TCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAA 6704 | ||| || ||||| | ||||| || | | ||||| |||| ||||||| || Sbjct 1751 TTCGAATTGTGATCTTATTCGATTTTCCAGTTGATTTATCCACAGCTGACACATTCAGAA 1692 Query 6705 TACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTG 6764 | ||||||||||| | ||| || | |||| ||||||||| ||| | || || | || Sbjct 1691 TTCCATTTGCATCGATATCAAAAGTGACATCAATTTGTGGAACACCACGTGGAGCTGGTG 1632 Query 6765 GAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCAC 6824 |||| || | || || || || || || | ||||| | | | |||||| | Sbjct 1631 GAATTCCAGACAATTCGAAAGTTCCGAGACGATGATTATCACGAGTCATGGCACGTTCTC 1572 Query 6825 CTTCATAGACTTTAATTGTCACCGCAGGTTGATTATC 6861 |||| || |||| |||| || |||||||||| || Sbjct 1571 CTTCGTAAACTTGGATTGAAACTCCAGGTTGATTGTC 1535 >seq2720 Length=2125 Score = 159 bits (176), Expect = 4e-34 Identities = 351/511 (69%), Gaps = 14/511 (3%) Strand=Plus/Plus Query 7361 GCCGTTCGTAA-ACGAC-GAAGGGCACGCGGGTTACCG-GAAATATC--TTTCTTATGTT 7415 || ||||| || ||| | || ||||||| || || | || ||||| |||| | || Sbjct 98 GCAGTTCGAAAGACGTCTGATGGGCACGTGGATTTGGGAGAGATATCCTTTTCCAGTCTT 157 Query 7416 TACGTTTAAACTC-TTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCC 7474 ||||| ||||| |||| ||||||| |||| | || ||| || ||||| || || Sbjct 158 CCCGTTTGAACTCATTCAT-GAAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCCA 216 Query 7475 AAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTT--AACA 7532 | || ||||| || || || | ||| ||||| || || ||||||| || || | Sbjct 217 AGATGAGTATCTCCAGCAGT-GATTTCACTTCGAATATCGATCCTTCAGCAATTGAAAGA 275 Query 7533 AC-GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCT 7591 | |||||||| || ||||| || || || ||||| || | ||| ||| | || || || Sbjct 276 ATTGAAACATCGAATGTACCTCCTCCAAGATCAAAGATCAATACATTCTTCTCTTCA-CT 334 Query 7592 TTGTTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAG 7650 | | ||| ||| | || || || | ||| || || ||||||||||| || || |||| Sbjct 335 TATTCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGTTGGTTCATTGATGATTCGAAT 394 Query 7651 ACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAA 7710 |||| |||||||| ||||| |||||||| || ||||||| ||| || || || Sbjct 395 TGCATTCAATCCAGCAATCGTTGCTGCATCTTTTGTTGCTTGTCTTTGACTGTCATTGAA 454 Query 7711 GTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGAT 7770 ||| || || || || | || || || | ||| | | || || || | || || | Sbjct 455 GTATGCAGGTACAGTAATCACTGCATCTTTCACTGTATGTCCAAGGTATGTCTCTGCAGT 514 Query 7771 ATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTC 7830 || ||||| || ||| ||||| | ||| || ||||| | || || ||| |||| Sbjct 515 TTCCTTCATCTTCTGAAGTACCATTGCTGAGATTTCTTCTGGATTGAATTGCTTCTTTTC 574 Query 7831 ACCGTTAAAATCAACTTCAATCA-TGGGTTT 7860 || || || ||||||||||||| ||| ||| Sbjct 575 TCCTTTCAATTCAACTTCAATCACTGGCTTT 605 Score = 122 bits (134), Expect = 1e-22 Identities = 227/328 (69%), Gaps = 4/328 (1%) Strand=Plus/Minus Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG 7594 |||||||| || ||||| | || || ||||| || | ||| ||| | || || ||| Sbjct 2083 GAAACATCGAATGTACCTCTTCCAAGATCAAAGATCAATACATTC-TCTCTTCA-CTTAT 2026 Query 7595 TTCTT-ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 | ||| ||| | || || || | ||| || || ||||||||||| || || |||| Sbjct 2025 TCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGTTGGTTCATTGATGATTCGAATTGC 1966 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 |||| |||||||| ||||| |||||||| || ||||||| ||| || || ||||| Sbjct 1965 ATTCAATCCAGCAATCGTTGCTGCATCTTTTGTTGCTTGTCTTTGACTGTCATTGAAGTA 1906 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 || || || || | || || || | ||| | | || || || | || || | || Sbjct 1905 TGCAGGTACAGTAATCACTGCATCTTTCACTGTATGTCCAAGGTATGTCTCTGCAGTTTC 1846 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 ||||| || ||| ||||| | ||| || ||||| | || || ||| |||| || Sbjct 1845 CTTCATCTTCTGAAGTACCATTGCTGAGATTTCTTCTGGATTGAATTGCTTCTTTTCTCC 1786 Query 7834 GTTAAAATCAACTTCAATCA-TGGGTTT 7860 || || ||||||||||||| ||| ||| Sbjct 1785 TTTCAATTCAACTTCAATCACTGGCTTT 1758 >seq17 Length=1338299 Score = 136 bits (150), Expect = 5e-27 Identities = 341/518 (66%), Gaps = 9/518 (2%) Strand=Plus/Plus Query 105559 TCAACGCGTTTCATGAACAAATCTGGAATCCACATGGCTGAAAAGAGGTCTCGACACCTC 105618 || || ||||||||||| | |||||||| ||| | ||| || | ||| ||| | | Sbjct 168090 TCGACACGTTTCATGAAGAGATCTGGAACCCAGAGGGCAAGGAACAAGTCACGAGCGCGC 168149 Query 105619 GCCTCTTCATCACCTTGATTCAAACGAATTTCGAGAAAATCGAGAATATCGGCGTGCCAT 105678 | ||||| || || || | ||| || |||| | |||||||||||| Sbjct 168150 TCTTCTTCTGGGCCAGTGTTTTTGCGGAGAGCGACGAACTCGAAGACGTCGGCGTGCCAT 168209 Query 105679 GGTTCTAAATAGACTGCAATAGACCCTTTACGACGC------CCCGCTTGATTGACATAT 105732 || || | ||||| || | | ||| ||||| || |||||| |||||| Sbjct 168210 GGCTCAAGATAGATAGCGAATGCACCTG---GACGCTTGTTTCCTCCTTGATCGACATAA 168266 Query 105733 CTTGCGGTTGAGTTATACACTCGTAACATTGGAATAATACCATCGGATGTTCCATTTGTT 105792 | || || ||| || || || | ||||||||||| |||| ||| |||||||| ||| Sbjct 168267 CGAGCAGTGTTGTTGTAAACACGGAGCATTGGAATAAGTCCATTGGAAGTTCCATTGGTT 168326 Query 105793 CCACGAATATGTGATTTATTTGCACGTACATCGTGAACGTGTAACCCAATACCCCCAGCC 105852 || || |||| | ||||| | | ||| || | | ||||| || ||||| Sbjct 168327 CCGGCGATGACTGATCCGGTGGCACGAATCTTGTGGACATTGAGACCAATTCCTCCAGCA 168386 Query 105853 CACTTACTGATACGCGCACACTCTTTTACTGTATCGTAAATACCGTCGATACTATCTTCC 105912 | ||| ||| | ||||||| ||| | || ||||| || ||| || |||||| Sbjct 168387 CTCTTCGAGATGAGTGCACACTGTTTCAGAGTGTCGTAGATTCCGAGAATCGAATCTTCG 168446 Query 105913 TTATTCGCAATCAGGAAACACGATGACATTTGTGGTCTGGGTGTACCAGCATTGAACAGA 105972 | ||| | || ||| ||||||||||| ||||| | || |||| ||||| ||| Sbjct 168447 CTCATCGTGAGCAAGAAGCACGATGACATCTGTGGACGACACGTTCCAGAGTTGAAGAGA 168506 Query 105973 GTTGGTGTTGCATGAATGAACAAACCTTTCGATAACGCTTCGTATGTTTCCAGGACGTGA 106032 ||||||| |||||| | | | | || ||| | | | ||||||||| | | || | Sbjct 168507 GTTGGTGATGCATGTGTCATGTACCGTTCCGACATCAAATTGTATGTTTCGATGGCGGCA 168566 Query 106033 TCAATATCGTGTCCATGAATACCAATAGCGACGCGCAT 106070 |||| || | ||| ||||| || |||||||| ||||| Sbjct 168567 GCAATGTCATTTCCGTGAATTCCGATAGCGACACGCAT 168604 >seq27 Length=943554 Score = 111 bits (122), Expect = 2e-19 Identities = 339/524 (65%), Gaps = 0/524 (0%) Strand=Plus/Plus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| || | || ||||| || || || | |||||| || ||||| || || || Sbjct 911772 TCATCATCGGCCTTGTACTTCTCAGCTTCGTTGACCATGCGCTCGATGTCATCCTTGGAG 911831 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCA 6688 | | ||||| ||||| || || || ||||| | ||| || | | ||| || Sbjct 911832 AGACGTCCCTTGTCATTGGTGATGGTGATCTTGTTTTGTTTTCCGGTTGACTTGTCAGTG 911891 Query 6689 GCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTA 6748 || ||||||| ||| || || ||||||| |||||| | || | ||||||||| Sbjct 911892 GCGGAAACATTCAGAATTCCGTTAGCATCAATATCGAATGTGACTTCGATTTGTGGTACT 911951 Query 6749 CCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 || | ||||| | ||| || || | || || || | ||||| || | || ||| | Sbjct 911952 CCACGTGGTGCTGGTGGGATTCCGGACAACTCGAACTTTCCAAGCAAGTTATTGTCCTTA 912011 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGCC 6868 | | | |||||| ||||||||||||| ||| || | ||||| || || Sbjct 912012 GTCATGGCACGTTCTCCTTCATAGACTTGAATCAAGACTCCTGGTTGGTTGTCAGAGTAA 912071 Query 6869 GTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGTC 6928 || | |||| |||| | | || | ||| || ||||| |||||| ||||| | ||| Sbjct 912072 GTCGTGAAGGTTTGAGCGGTTTTGGTTGGGATAGTCGTGTTTCTCTTAATAAGAGCAGTC 912131 Query 6929 ATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAGG 6988 || | || || || || | |||||||| || |||| || || | || | || Sbjct 912132 ATGACTCCTCCAGCGGTCTCAATACCAAGAGAAAGTGGTGCAACATCAAGAAGAAGAAGA 912191 Query 6989 TCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTAT 7048 |||||||||| || || || | | ||||||||||| || | || || || Sbjct 912192 TCTTGAACAGCCTCCGATTTATCTCCAGAAAGAATGGCGGCTTGAACTGCAGCTCCATAA 912251 Query 7049 GCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACC 7092 || || || || || || || || | || || ||||| || || Sbjct 912252 GCAACAGCTTCGTCTGGATTGATAGACTTGTTGAGTTCCTTTCC 912295 Score = 86.0 bits (94), Expect = 8e-12 Identities = 135/193 (70%), Gaps = 3/193 (2%) Strand=Plus/Plus Query 7956 CAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGAC 8015 |||| || ||||| | ||| |||||||| ||| || || || || || || || | || Sbjct 913421 CAAATACGGTGTTGTGGGGATTCATGGCGACTTGATTTTTTGCTGCATCTCCAATCAAAC 913480 Query 8016 GTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCG 8075 | ||| | | || || ||||||||||| || || || || || ||||| ||||| | Sbjct 913481 GCTCAGAGT---CGGTGAAAGCGACGTACGACGGAGTGGTGCGGTTTCCTTGATCGTTGG 913537 Query 8076 CAATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAAT 8135 | || ||||| || ||| || | || || || || || || || ||||| | || Sbjct 913538 CGATGATTTCGACTTTTCCGTGCTGGAAAACTCCAACACAGGAGTAAGTGGTTCCGAGAT 913597 Query 8136 CAATACCGATTGC 8148 ||||||||| ||| Sbjct 913598 CAATACCGACTGC 913610 >seq486 Length=71490 Score = 86.0 bits (94), Expect = 8e-12 Identities = 164/238 (69%), Gaps = 3/238 (1%) Strand=Plus/Plus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGC 11504 |||||| || | |||||||||||||| || || | |||||| ||| ||| | | || Sbjct 49025 TTTCTT-CCTACAGCATCAATTTCATCAATGAACAAAATACATGGTGAATTCTTCCTGGC 49083 Query 11505 CAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGA 11564 || ||| |||||||| |||||| || || || || ||||||||||| | || Sbjct 49084 CATGGAAAACATATCACGAACTCTTGCTGGTCCGACTCCAACAAACATTTCGAGAAATTC 49143 Query 11565 TGACCCCGA-ACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAA 11623 ||| || || ||| | ||| || || || | ||| || ||| | || |||| || Sbjct 49144 TGATCCAGAGACAGT-AATGAATGGTACATTTGCTTCTCCTGCTGTTGCCTTAGCTAGAA 49202 Query 11624 GTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||||| || || || ||| || ||||| | || || | || ||||| ||||| Sbjct 49203 GTGTTTTTCCCGTTCCCGGTGGTCCAGTTAAAATAGCTCCTTTCGGAATTTTGGCACC 49260 >seq178 Length=305597 Score = 86.0 bits (94), Expect = 8e-12 Identities = 164/238 (69%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 11445 TTTCTTACCAATCGCATCAATTTCATCTATAAAGATAATACACGGTTGATTTTCACGTGC 11504 |||||| || | |||||||||||||| || || | |||||| ||| ||| | | || Sbjct 261430 TTTCTT-CCTACAGCATCAATTTCATCGATGAACAAAATACATGGTGAATTCTTCCTGGC 261372 Query 11505 CAATTCAAATATATCACGGACTCTTTTTGCGCCTACGCCTACAAACATTTCAACGAACGA 11564 || ||| |||||||| |||||| || || || || ||||||||||| | || Sbjct 261371 CATGGAAAACATATCACGAACTCTTGCTGGTCCGACTCCAACAAACATTTCGAGAAATTC 261312 Query 11565 TGACCCCGA-ACACTGAATAAAAGGAACGGAAGATTCACCCGCTATAGCACGTGCTAAAA 11623 ||| || || ||| | ||| || || || | ||| || ||| | || |||| || Sbjct 261311 TGATCCAGAGACAGT-AATGAATGGTACATTTGCTTCTCCTGCTGTTGCCTTAGCTAGAA 261253 Query 11624 GTGTTTTACCTGTACCTGGTTTACCTGTTAATAATGCACCCCTTGGTATTTTAGCACC 11681 ||||||| || || || ||| || ||||| | || || | || ||||| ||||| Sbjct 261252 GTGTTTTTCCCGTTCCCGGTGGTCCAGTTAAAATAGCTCCTTTCGGAATTTTGGCACC 261195 >seq18 Length=1187494 Score = 84.2 bits (92), Expect = 3e-11 Identities = 160/236 (68%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 6626 GATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCT 6685 || |||| ||||| ||||| ||| || ||||| | ||||| || | | ||||| Sbjct 895282 GACAATCGTCCCTTCTCATTTCGAATTGTGATCTTATTCGATTTTCCAGTTGATTTATCC 895223 Query 6686 TCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGT 6745 |||| ||||||| ||| ||||||||||| | ||| || | |||| ||||||||| Sbjct 895222 ACAGCTGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTGACATCAATTTGTGGA 895163 Query 6746 GTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCC 6805 ||| | || || | |||||| || | || || || || || || | ||||| Sbjct 895162 ACACCACGTGGAGCTGGTGGAATTCCAGACAATTCGAAAGTTCCGAGACGATGATTATCA 895103 Query 6806 GTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATC 6861 | | | |||||| ||||| || |||| |||| || |||||||||| || Sbjct 895102 CGAGTCATGGCACGTTCTCCTTCGTAAACTTGGATTGAAACTCCAGGTTGATTGTC 895047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635106561076200