Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_015286.1 Length=175230 Score E Sequences producing significant alignments: (Bits) Value seq1827 98.7 1e-15 >seq1827 Length=14047 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/142 (77%), Gaps = 4/142 (3%) Strand=Plus/Minus Query 22475 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGGAGTTCGAG 22534 ||||| |||||||| ||| ||||||||||| |||||||||||| ||||| |||||| Sbjct 8756 TGGGGCCATAGCTCAGCTGGGAGAGCGCCTGCCTTGCAAGCAGGAGGTCAGCGGTTCGA- 8698 Query 22535 TCTCCTAT-TCTCCACTCAATCCTCT-TTAGCTCAGCGGTAGAGCGGTTGACTGTTAATC 22592 || | | | ||||| || ||| || |||||||| |||||||| | |||||| |||| Sbjct 8697 TCCCGTTTGGTTCCAC-CATTCCCCTGATAGCTCAGTGGTAGAGCACTCGACTGTAAATC 8639 Query 22593 AATTGGTCCCTGGTTCGATCCC 22614 | | ||| | ||||||| ||| Sbjct 8638 GAGTTGTCACAGGTTCGAGCCC 8617 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 560584839882000