Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq1827 89.7 2e-12 >seq1827 Length=14047 Score = 89.7 bits (98), Expect = 2e-12 Identities = 72/86 (84%), Gaps = 2/86 (2%) Strand=Plus/Minus Query 58656 TATAATGGCTCCGTGGTGTAGCGGT--TAACACGCCTGCCTGTCACGTAGGAGATCGCCG 58713 ||| |||| ||||||||||| | ||||| |||||||||||||| |||||||||| | Sbjct 7481 TATTATGGAACCGTGGTGTAGTTGGCCTAACATGCCTGCCTGTCACGCAGGAGATCGCGG 7422 Query 58714 GTTCGAATCCGGTCGGGGCCGCCATT 58739 |||||||||| ||||| |||||||| Sbjct 7421 GTTCGAATCCCGTCGGTTCCGCCATT 7396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591842990056640