Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq17 95.1 4e-14 >seq17 Length=1338299 Score = 95.1 bits (104), Expect = 4e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 254976 TTATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCA 255035 |||| |||||| ||||||| | ||||||| ||||| || ||||||||||| || || Sbjct 168303 TTATTCCAATGCTCCGTGTTTACAACAACACTGCTCGTTATGTCGATCAAGGAGGAAACA 168244 Query 255036 AACGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGAC 255082 | || ||||| || ||| | ||||| || ||||| |||||||||||| Sbjct 168243 AGCGTCCAGGTGCATTCGCTATCTATCTTGAGCCATGGCACGCCGAC 168197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588268741415725