Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20brenneri_20[genbank_20GCA_5F000143925.2_202010-11- 15] 3,305 sequences; 190,369,721 total letters Query= NC_028999.1 Length=309208 Score E Sequences producing significant alignments: (Bits) Value seq1827 86.0 1e-11 >seq1827 Length=14047 Score = 86.0 bits (94), Expect = 1e-11 Identities = 73/86 (85%), Gaps = 3/86 (3%) Strand=Plus/Plus Query 294854 CTGAATATGGTGCCGTCAGAG-GGATTCGAACCCGTCGACCTACTGATTACAAGTCAGTT 294912 || || ||||||||| | ||| ||| | |||||| | |||||||||||||||||||||| Sbjct 7293 CTAAAAATGGTGCCGGC-GAGAGGACTTGAACCCC-CAACCTACTGATTACAAGTCAGTT 7350 Query 294913 GCTCTACCAGCTGAGCTATAACGGCA 294938 |||||||||| ||||||| | ||||| Sbjct 7351 GCTCTACCAGTTGAGCTACACCGGCA 7376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989292506325665