Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20briggsae_20[genbank_20GCA_5F000004555.3_202014-07- 02] 367 sequences; 108,384,165 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq5 199 7e-46 seq9 145 1e-29 seq13 87.8 3e-12 seq4 87.8 3e-12 seq1 87.8 3e-12 >seq5 Length=14578851 Score = 199 bits (220), Expect = 7e-46 Identities = 182/230 (79%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | ||||| | ||||||||| || || || || || |||||||| || || | Sbjct 4173965 TTCCTCCTCTGAGGCGGAGTACCAAGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCG 4173906 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || || ||||| || | |||||| |||||||| |||||||| || ||||| |||| Sbjct 4173905 AAAGAGTTCTTCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTG 4173846 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || ||||||||||| || || || ||||| ||||||||| || | | || | Sbjct 4173845 GGATTCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTATCGGAAGCCTCGA 4173786 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| |||||||||||||| ||||| ||||||||||| || |||||| Sbjct 4173785 CTTCCAAAGTGATGGTTTTTCCAGTGAGTGTCTTGACGAAGATTTGCATT 4173736 Score = 196 bits (216), Expect = 9e-45 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || ||||| | || | || || || ||||| ||||||||||| |||||||| Sbjct 4175021 CCTCCACGGAGGCGAAGAACGAGATGGAGAGTAGACTCCTTTTGGATGTTGTAATCGGAA 4174962 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| |||||||| |||||||| || ||||| |||||| Sbjct 4174961 AGAGTACGTCCATCCTCGAGTTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTGGA 4174902 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || || ||||||||||||||||| || ||||| |||||||||||| | | ||| ||| Sbjct 4174901 ATTCCCTCCTTGTCTTGAATCTTGGCTTTGACATTCTCGATGGTGTCCGAAGCTTCGACT 4174842 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||| || ||||| || | ||||||||||| ||||||||| Sbjct 4174841 TCGAGGGTGATCGTCTTTCCGGTCAATGTCTTGACGAAGATCTGCATT 4174794 Score = 196 bits (216), Expect = 9e-45 Identities = 180/228 (79%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| || || || | || | || || || ||||| ||||||||||| ||||| || Sbjct 4175477 CCTCCACGGAGACGAAGGACAAGATGGAGTGTTGACTCCTTTTGGATGTTGTAATCCGAC 4175418 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || || |||||||| || ||||| |||||||| |||||||| |||||||| ||||| Sbjct 4175417 AGGGTTCTACCATCTTCCAATTGCTTTCCGGCGAAGATGAGTCTCTGTTGGTCTGGTGGG 4175358 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||| || || ||||| ||||| ||| ||||||||||| | | ||| ||| Sbjct 4175357 ATTCCTTCCTTATCCTGGATCTTGGCCTTAACGTTTTCGATGGTGTCAGAAGCTTCGACT 4175298 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||||| ||||| || || ||||||||||| ||||||||| Sbjct 4175297 TCGAGAGTGATGGTCTTTCCAGTCAGAGTCTTGACGAAGATCTGCATT 4175250 Score = 188 bits (208), Expect = 1e-42 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| ||||| || | |||||||| || |||||||| || |||||||| || |||||| Sbjct 1551597 CCTCCACGAAGACGGAGAACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 1551656 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| |||||||| || | |||||| ||||| |||||| Sbjct 1551657 AGAGTACGTCCATCCTCGAGTTGCTTTCCGGCGAAGATCAATCTTTGCTGGTCTGGTGGA 1551716 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||| ||||| |||||||| ||||||||| || | | || ||| Sbjct 1551717 ATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTCTCGATGGTATCGGAGGCCTCGACT 1551776 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | || || || || ||||| || ||||||||||| || ||||| Sbjct 1551777 TCGAGGGGAATTGTCTTACCCGTCAGAGTCTTGACGAAGATTTGCAT 1551823 Score = 179 bits (198), Expect = 7e-40 Identities = 179/232 (77%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | |||||||| || |||||||| || |||||||| || || | Sbjct 4173737 TTCCTCCTCTGAGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCG 4173678 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || || ||||| || | |||||| |||||||| |||||||| || ||||| |||| Sbjct 4173677 AAAGAGTTCTTCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTG 4173618 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || ||||||||||| || || || ||||| ||||||||| || | | || | Sbjct 4173617 GGATTCCCTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTATCGGAAGCCTCCA 4173558 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 | ||||||||||| |||||||| || | || |||||||| || ||||| || Sbjct 4173557 CCTCCAAGGTGATAGTTTTTCCTGTCAACGTTTTGACGAAGATTTGCATGAT 4173506 Score = 174 bits (192), Expect = 3e-38 Identities = 176/229 (77%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | |||||||| || |||||||| || |||||||| || || | Sbjct 4175251 TTCCTCCTCTGAGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCG 4175192 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | ||||| || | |||||| || ||||| || | || ||| || || |||| Sbjct 4175191 AGAGGGTACGTCCATCCTCAAGCTGCTTTCCAGCGAAGATCAATCGTTGCTGATCTGGTG 4175132 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || |||||||||||||| ||||| |||||||| ||| || ||||| | | ||| | Sbjct 4175131 GGATTCCTTCCTTGTCTTGGATCTTAGCCTTGACATTCTCAATAGTGTCCGAAGCTTCGA 4175072 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | || | |||||| || ||||| || || ||||||||||| |||||||| Sbjct 4175071 CCTCGAGGGTGATAGTCTTTCCGGTAAGCGTCTTGACGAAGATCTGCAT 4175023 Score = 156 bits (172), Expect = 8e-33 Identities = 173/231 (75%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 68231 ATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATC 68290 || |||||| ||||| || | || | || || || ||||| ||||||||||| || || Sbjct 4175984 ATCTCCTCCACGAAGACGGAGAACGAGATGAAGGGTCGACTCCTTTTGGATGTTGTAGTC 4175925 Query 68291 GGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGG 68350 ||| | || | || || || | |||||| || || || || | | || ||||| || Sbjct 4175924 GGACAAAGTGCGTCCGTCCTCGAGCTGCTTTCCAGCAAAGATCAAGCGCTGCTGGTCTGG 4175865 Query 68351 TGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTC 68410 ||| || ||||||||||| || ||||| |||||||| |||||| ||||| | | ||| Sbjct 4175864 TGGGATTCCTTCCTTGTCCTGGATCTTGGCCTTGACATTCTCGATTGTGTCCGAAGCTTC 4175805 Query 68411 TACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 |||||||| |||||||| ||||| || | ||||||||||| || ||||| Sbjct 4175804 GACTTCCAAAGTGATGGTCTTTCCGGTCAAAGTCTTGACGAAGATTTGCAT 4175754 Score = 140 bits (154), Expect = 6e-28 Identities = 118/145 (81%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| ||||| || || | |||||| || || |||||||| |||||||||||||| || || Sbjct 4174108 CTTACCGGCAAAGATCAATCTTTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATTTT 4174049 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 |||||||| ||| |||||||| | | ||| ||||| | |||||||||||||| || Sbjct 4174048 AGCCTTGACATTCTCAATGGTGTCGGAGGCTTCGACTTCGAGTGTGATGGTTTTTCCAGT 4173989 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 ||| ||||||||||| ||||||||| Sbjct 4173988 GAGTGTCTTGACGAAGATCTGCATT 4173964 Score = 118 bits (130), Expect = 2e-21 Identities = 234/338 (69%), Gaps = 10/338 (3%) Strand=Plus/Plus Query 9935 CATGACGCCCGCCTTCTGGTACTCCGATACCCGGCGCTCGAAGAAGTTGGACTTGCCCTC 9994 ||||||||||| ||| ||||| || || || |||||||||||||| ||| || || Sbjct 11383955 CATGACGCCCGGTCGCTGATACTCGGAAACGCGCTTCTCGAAGAAGTTGGTCTTTCCATC 11384014 Query 9995 GAGGGAAATGAGCTCCATGAAGTCAAAGGGGTTCTCGGCGCCAAACTGCTTGGGGTAACC 10054 || || ||| ||||||||||||||| || |||| | || || |||| | | || Sbjct 11384015 GATCGAGATGTTCTCCATGAAGTCAAATGGATTCTTGACGTTGTACAGCTTATCGCATCC 11384074 Query 10055 GAG-TGCTGTGAAAATGCGGTCAGCCACGAACTCGATGTACTGGCTCATCAGGTCCG-AG 10112 ||| | ||| || | | || || |||||||||||||||||| ||||| ||| | || Sbjct 11384075 GAGCTCCTG-GAGCAGATGATCGGCGACGAACTCGATGTACTGGGACATCA-GTCGGCAG 11384132 Query 10113 TTCATGCCAATCATGCGGCAGGGGATGGCGTCGCAAATGAAGTCCTTTTCGTTGGCGACC 10172 ||||| || |||||| ||||| ||| ||| | ||| |||| || ||||||| Sbjct 11384133 TTCATTCCGATCATGTCAACGGGGAGGGCTTCGGTGAGGAACTCCTGCTCAATGGCGACA 11384192 Query 10173 GCTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGAGCTTCGAA 10229 || | ||| |||| ||| | | | || || ||||||||| | ||| | || Sbjct 11384193 GCGT-CTC--TGATGATCTCGAAGATGCGCTCTTGGCTCAGCTTGTTTTGAAGCATTGAG 11384249 Query 10230 TACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTC 10267 || ||||| | || | |||||||||| ||||| Sbjct 11384250 TAGAGGAGGCAAGCGAAGTCGCGGTGGAGGCCTTCGTC 11384287 Score = 113 bits (124), Expect = 8e-20 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || | || || ||||| ||||| || ||||||||||| || ||||| Sbjct 4174664 CTTACCAGCGAAAATCAATCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCCTGGATCTT 4174605 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || ||||| |||||| ||||| | | ||| ||||| | |||||| || ||||| || Sbjct 4174604 GGCTTTGACATTCTCGATAGTGTCCGAAGCTTCGACTTCGAGGGTGATCGTCTTTCCGGT 4174545 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 | ||||||||||| ||||||||| Sbjct 4174544 CAATGTCTTGACGAAGATCTGCATT 4174520 Score = 113 bits (124), Expect = 8e-20 Identities = 109/140 (78%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || | ||||||||| || ||||| || ||||||||||| || ||||| || Sbjct 4175618 CCAGCAAAGATCAATCTTTGTTGATCTGGTGGGATTCCTTCCTTGTCCTGGATCTTGGCT 4175559 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||||| ||| || ||||| | | ||| |||||||| |||||||| ||||| || | Sbjct 4175558 TTGACATTCTCAATAGTGTCCGAAGCTTCGACTTCCAAAGTGATGGTCTTTCCGGTCAAA 4175499 Query 68442 GTCTTGACGAATATCTGCAT 68461 ||||||||||| || ||||| Sbjct 4175498 GTCTTGACGAAGATTTGCAT 4175479 Score = 95.1 bits (104), Expect = 2e-14 Identities = 108/145 (74%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 68318 CTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTT 68377 ||| || ||||| || | || || || || |||||||| ||||||||||| || ||||| Sbjct 4174390 CTTACCAGCGAAAATCAATCGCTGCTGATCTGGTGGAATTCCTTCCTTGTCCTGGATCTT 4174331 Query 68378 TGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGT 68437 || |||||| || || ||||| | | ||| || || | ||||| || ||||| || Sbjct 4174330 GGCTTTGACGTTTTCAATAGTGTCCGAGGCTTCAACCTCAAGAGTGATAGTCTTTCCAGT 4174271 Query 68438 GAGGGTCTTGACGAATATCTGCATT 68462 || || || ||||| ||||||||| Sbjct 4174270 AAGAGTTTTCACGAAAATCTGCATT 4174246 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 2191105 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 2191046 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 2191045 CCCCGCATTGGGC 2191033 >seq9 Length=17485439 Score = 145 bits (160), Expect = 1e-29 Identities = 217/308 (70%), Gaps = 0/308 (0%) Strand=Plus/Plus Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAG 268462 || ||||| || |||||||| || || ||||| |||||||| ||| ||||| |||||| Sbjct 4620939 GGACTCTCATGATTGAAGAGAATTCCATTGCATGCGAACATTTTATAAGCCTCTCGGTAG 4620998 Query 268463 TTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAG 268522 || || || |||||||| || |||| || ||||| || ||||| || | ||||| ||| Sbjct 4620999 TTGACAACAATCCAGTATCCATACATTTTAGCAACAGCATACGGTGATCTTGGATAGAAC 4621058 Query 268523 GGCGTCGTGATCTTTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGCT 268582 || ||| | |||| || || ||| | ||||| || | | ||| || ||||| ||| Sbjct 4621059 GGAGTCTTTTCACTTTGTGGAATCTCTTGTACTTTTCCGTACAACTCCGATGTCGACGCT 4621118 Query 268583 TGGTAGAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAACGAAGA 268642 || ||||| | ||| ||||| || |||| || ||||| | ||||||| Sbjct 4621119 TGATAGAAACGCACTTTTTCGGTGAGACGACACGCGTGGATGGCGTCGAGAAGACGAAGA 4621178 Query 268643 GTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGGACATGG 268702 ||||| | | |||| || || || || || || || | || || || || | ||||||| Sbjct 4621179 GTTCCGACGGCATCTACTTCAGCAGTGTATTCAGGAAGATCAAAAGAGACTTTGACATGG 4621238 Query 268703 CTCTGGGC 268710 ||| || Sbjct 4621239 GACTGAGC 4621246 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 6486164 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 6486105 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 6486104 CCCCGCATTGGGC 6486092 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12958037 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12958096 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12958097 CCCCGCATTGGGC 12958109 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12961796 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12961737 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12961736 CCCCGCATTGGGC 12961724 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12964844 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12964903 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12964904 CCCCGCATTGGGC 12964916 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12966086 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12966027 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12966026 CCCCGCATTGGGC 12966014 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12966989 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12966930 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12966929 CCCCGCATTGGGC 12966917 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12969165 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12969106 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12969105 CCCCGCATTGGGC 12969093 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12973040 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12972981 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12972980 CCCCGCATTGGGC 12972968 >seq13 Length=21540570 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 1711282 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 1711341 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 1711342 CCCCGCATTGGGC 1711354 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 18961765 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 18961824 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 18961825 CCCCGCATTGGGC 18961837 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 19483985 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 19484044 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 19484045 CCCCGCATTGGGC 19484057 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 19486049 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 19486108 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 19486109 CCCCGCATTGGGC 19486121 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 19500628 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 19500687 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 19500688 CCCCGCATTGGGC 19500700 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 19556574 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 19556633 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 19556634 CCCCGCATTGGGC 19556646 >seq4 Length=16627154 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 9327025 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 9326966 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 9326965 CCCCGCATTGGGC 9326953 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13305835 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13305894 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13305895 CCCCGCATTGGGC 13305907 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13356274 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13356215 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13356214 CCCCGCATTGGGC 13356202 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13357710 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13357651 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13357650 CCCCGCATTGGGC 13357638 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13364674 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13364733 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13364734 CCCCGCATTGGGC 13364746 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13366960 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13367019 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13367020 CCCCGCATTGGGC 13367032 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13370667 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13370726 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13370727 CCCCGCATTGGGC 13370739 Score = 86.0 bits (94), Expect = 1e-11 Identities = 92/122 (75%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 176229 GGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGG 176288 || || || || ||||| ||||| | ||| || ||||||||||| ||||| || || || Sbjct 8906014 GGAGAAAGCTGGGTGAAAATATAACGAGCCGAAGCACTGTCCTTTCCTCCTTGGAGACGA 8906073 Query 176289 GAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGG 176348 | ||| || |||||| ||||| | || |||||||| || || || || |||||||| Sbjct 8906074 GTACCAAACTGTCCGATTGGAAGCAACACGTTGATGTTGTTAGATCCAACATAGTCTTGA 8906133 Query 176349 GC 176350 || Sbjct 8906134 GC 8906135 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||||| Sbjct 9325221 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 9325162 Query 84516 CCCACATCGGGC 84527 ||| ||| |||| Sbjct 9325161 CCCGCATTGGGC 9325150 >seq1 Length=15455979 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 10897935 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 10897876 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 10897875 CCCCGCATTGGGC 10897863 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12101188 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12101129 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12101128 CCCCGCATTGGGC 12101116 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12109604 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12109663 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12109664 CCCCGCATTGGGC 12109676 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12138957 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12139016 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12139017 CCCCGCATTGGGC 12139029 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12139878 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12139819 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12139818 CCCCGCATTGGGC 12139806 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12149937 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12149878 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12149877 CCCCGCATTGGGC 12149865 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13310104 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13310163 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13310164 CCCCGCATTGGGC 13310176 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13478049 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13477990 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13477989 CCCCGCATTGGGC 13477977 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13556992 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13556933 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13556932 CCCCGCATTGGGC 13556920 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13557957 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13558016 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13558017 CCCCGCATTGGGC 13558029 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13589494 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13589435 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13589434 CCCCGCATTGGGC 13589422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921618172057240