Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20briggsae_20[genbank_20GCA_5F000004555.3_202014-07- 02] 367 sequences; 108,384,165 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq5 178 5e-39 seq4 107 8e-18 seq1 105 3e-17 seq9 86.0 2e-11 >seq5 Length=14578851 Score = 178 bits (196), Expect = 5e-39 Identities = 261/366 (71%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| |||||||| ||||| ||||| ||| | Sbjct 5574822 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCT 5574763 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | |||| | |||||||| |||||||| || || || ||||| || || | Sbjct 5574762 GGGACATGCAGTCAAGGATGCAGTGATTACTGTACCTGCATACTTCAACGACAGTCAGAG 5574703 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| |||||||| | |||| | ||||| || ||||| Sbjct 5574702 ACAAGCAACCAAAGATGCAGCTACCATTGCTGGACTCAATGCCATCCGAATCATCAATGA 5574643 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaa 451480 ||| || ||||||||||| || |||||| | ||| ||| ||| || ||||| || Sbjct 5574642 ACCGACTGCAGCTGCTCTTGCTTATGGA-TTGGA----TAAAGGAATCAGTGAAGAGAAG 5574588 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||| | | | |||||| |||| ||||| ||| |||| ||| | |||||||||| Sbjct 5574587 AATGTACTGATCTTTGATCTTGGAGGAGGTACTTTTGATGTTTCAATCCTTTCAATTGCT 5574528 Query 451541 GATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || |||| ||||| ||| | || ||| ||||||||||| ||||| || ||| Sbjct 5574527 GAAGGATCAATATTCGAAGTCAAGTCCACAGCTGGAGATACTCATCTTGGAGGAGAGGAT 5574468 Query 451598 ATTGAT 451603 | ||| Sbjct 5574467 TTCGAT 5574462 Score = 178 bits (196), Expect = 5e-39 Identities = 261/366 (71%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| |||||||| ||||| ||||| ||| | Sbjct 6048999 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCT 6048940 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | |||| | |||||||| |||||||| || || || ||||| || || | Sbjct 6048939 GGGACATGCAGTCAAGGATGCAGTGATTACTGTACCTGCATACTTCAACGACAGTCAGAG 6048880 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| |||||||| | |||| | ||||| || ||||| Sbjct 6048879 ACAAGCAACCAAAGATGCAGCTACCATTGCTGGACTCAATGCCATCCGAATCATCAATGA 6048820 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaa 451480 ||| || ||||||||||| || |||||| | ||| ||| ||| || ||||| || Sbjct 6048819 ACCGACTGCAGCTGCTCTTGCTTATGGA-TTGGA----TAAAGGAATCAGTGAAGAGAAG 6048765 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||| | | | |||||| |||| ||||| ||| |||| ||| | |||||||||| Sbjct 6048764 AATGTACTGATCTTTGATCTTGGAGGAGGTACTTTTGATGTTTCAATCCTTTCAATTGCT 6048705 Query 451541 GATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || |||| ||||| ||| | || ||| ||||||||||| ||||| || ||| Sbjct 6048704 GAAGGATCAATATTCGAAGTCAAGTCCACAGCTGGAGATACTCATCTTGGAGGAGAGGAT 6048645 Query 451598 ATTGAT 451603 | ||| Sbjct 6048644 TTCGAT 6048639 Score = 178 bits (196), Expect = 5e-39 Identities = 351/512 (69%), Gaps = 13/512 (3%) Strand=Plus/Plus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TC 452049 ||||| |||||||||||||||| || |||||||||||||||||| | || | || || Sbjct 6051005 AATCCAGATGAAGCTGTTGCATTCGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTC 6051064 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | ||| | | | | |||| | || | || ||||| | || || ||||||| | Sbjct 6051065 A-AGGATCACACAATCAAAGATGTATTGCTGGTTGATGTTGCTCCACTGAGTCTTGGAAT 6051123 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || ||||||||||| ||||||| ||| | ||| | ||| || ||||| | Sbjct 6051124 CGAGACAGCTGGTGGTGTGATGACCAATCTCATTGATCGAAACACCAGAATTCCAAC--A 6051181 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || | || ||||||| | |||| |||||| |||||||| || | |||||||| Sbjct 6051182 AAGGCATCGAAAACATTCACTACATATGATGATAATCAACCAGGAGTCTCAATTCAAGTA 6051241 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | |||||||||||||| ||||| || ||||| || || ||| ||| | || | Sbjct 6051242 TACGAAGGAGAACGTGCGATGACTCGGGATAACCATCGTCTTGGAACATT--CGAATTGA 6051299 Query 452288 --AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 ||||| || ||| | || |||||| |||||| | || | |||| | |||| Sbjct 6051300 GTGGAATTCCACCAGCTCCACGAGGTGTTCCTCAGATTGAAGTCACTTTTGATATCGATG 6051359 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 ||||||| ||||| |||||| || | || ||||| |||||||| | | || | Sbjct 6051360 CAAATGGAATTCTGAATGTGTCGGCTGAGGATAAATCGACTGGAAAAACGAATCGGATCA 6051419 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || || ||| || ||| ||||| |||||| | || | Sbjct 6051420 CAATTCGAAATGAGAAAGGACGATTGTCTCAATCAGACATTGATCGAATGGTTAACGAGG 6051479 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAA 452494 || || ||||| ||||| |||| |||||| Sbjct 6051480 CAAAACAATTCGAAAAGGAAGATGGAGAACAA 6051511 Score = 176 bits (194), Expect = 2e-38 Identities = 359/524 (69%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||||| ||||| ||||| || ||||| || | |||||| || || || ||| Sbjct 6050106 AATACAGTATTCGATGCAAAACGATTGATTGGACGACGTTTTGATGAAGAAACAGTTCAA 6050165 Query 451151 AAAGA--GAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAA--AGGAAAGCCCTATAT 451206 ||| | ||| ||| | | || ||| ||| |||| |||||| || || Sbjct 6050166 TCAGACTGCAAACATTGGC--CATTTGGCGTA--AAAGGAAAACAAGGAAAACCAGTGAT 6050221 Query 451207 TCAAGT--AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||| |||| | |||| |||| | | || ||| |||||||| ||| | ||| Sbjct 6050222 CGAAGTGGAAATGA--AAGGAGAAAAGAGACAGTTCAATCCAGAAGAAATCTCAGCAATG 6050279 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || ||| |||||||| ||||| ||||| ||| | || | |||| | |||||| Sbjct 6050280 GTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCTGGGACATGCAGTCAAGGATGCA 6050339 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||||||| || || || ||||| || || | |||||||| |||||||||| Sbjct 6050340 GTGATTACTGTACCTGCATACTTCAACGACAGTCAGAGACAAGCAACCAAAGATGCAGCT 6050399 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| | |||| | ||||| || |||||||| || ||||||||||| || Sbjct 6050400 ACCATTGCTGGACTCAATGCCATCCGAATCATCAATGAACCGACTGCAGCTGCTCTTGCT 6050459 Query 451445 TATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaaaaTATTTTAGTATTTGATTTTG 451502 |||||| | ||| ||| ||| || ||||| || ||| | | | |||||| ||| Sbjct 6050460 TATGGA-TTGGA----TAAAGGAATCAGTGAAGAGAAGAATGTACTGATCTTTGATCTTG 6050514 Query 451503 GTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAA 451559 | ||||| ||| |||| ||| | |||||||||| || || | || ||||| | Sbjct 6050515 GAGGAGGTACTTTTGATGTTTCAATCCTTTCAATTGCTGAAGGATCAATCTTCGAAGTCA 6050574 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || | || ||| ||||||||||| ||||| || ||| | ||| Sbjct 6050575 AGTCCACAGCTGGAGATACTCATCTTGGAGGAGAGGATTTCGAT 6050618 Score = 172 bits (190), Expect = 2e-37 Identities = 358/524 (68%), Gaps = 22/524 (4%) Strand=Plus/Plus Query 451091 AACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACAA 451150 || ||||||| ||||| ||||| || ||||| || | |||||| || || || ||| Sbjct 6043816 AATACAGTATTCGATGCAAAACGATTGATTGGACGACGTTTTGATGAAGAAACAGTTCAA 6043875 Query 451151 AAAGA--GAAAAAATTCTTTTCTTATGATGTAGTAAATCAAAA--AGGAAAGCCCTATAT 451206 ||| | ||| ||| | | || ||| ||| |||| |||||| || || Sbjct 6043876 TCAGACTGCAAACATTGGC--CATTTGGCGTA--AAAGGAAAACAAGGAAAACCAGTGAT 6043931 Query 451207 TCAAGT--AAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATG 451264 |||| |||| | |||| |||| | | || ||| |||||||| ||| | ||| Sbjct 6043932 CGAAGTGGAAATGA--AAGGAGAAAAGAGACAGTTCAATCCAGAAGAAATCTCAGCAATG 6043989 Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || ||| |||||||| ||||| ||||| ||| | || | |||| | ||| || Sbjct 6043990 GTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCTGGGACATGCAGTCAAGGATACA 6044049 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||||||| || || || ||||| || || | |||||||| |||||||||| Sbjct 6044050 GTGATTACTGTACCTGCATACTTCAACGACAGTCAGAGACAAGCAACCAAAGATGCAGCT 6044109 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 |||||||| | |||| | ||||| || |||||||| || ||||||||||| || Sbjct 6044110 ACCATTGCTGGACTCAATGCCATCCGAATCATCAATGAACCGACTGCAGCTGCTCTTGCT 6044169 Query 451445 TATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaaaaTATTTTAGTATTTGATTTTG 451502 |||||| | ||| ||| ||| || ||||| | ||| | | | |||||| ||| Sbjct 6044170 TATGGA-TTGGA----TAAAGGAATCAGTGAAGAGATGAATGTACTGATCTTTGATCTTG 6044224 Query 451503 GTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAA 451559 | ||||| ||| |||| ||| | |||||||||| || || |||| ||||| | Sbjct 6044225 GAGGAGGTACTTTTGATGTTTCAATCCTTTCAATTGCTGAAGGATCAATATTCGAAGTCA 6044284 Query 451560 AGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGAT 451603 || | || ||| ||||||||||| ||||| || ||| | ||| Sbjct 6044285 AGTCCACAGCTGGAGATACTCATCTTGGAGGAGAGGATTTCGAT 6044328 Score = 168 bits (186), Expect = 3e-36 Identities = 349/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG-TTC 452049 ||||| |||||||||||||||| || |||||||||||||||||| | || | || || Sbjct 5574074 AATCCAGATGAAGCTGTTGCATTCGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTC 5574015 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | ||| ||| | | |||| | || | || || || | || || ||||||| | Sbjct 5574014 A-AGGATCAAACAATCAAAGATGTATTGCTGGTTGACGTTGCTCCACTGAGTCTTGGAAT 5573956 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || ||||||||||| ||||||| ||| | ||| | ||| || ||||| | Sbjct 5573955 CGAGACAGCTGGTGGTGTGATGACCAATCTCATTGATCGAAACACCAGAATTCC--AACA 5573898 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || | || ||||||| | |||| ||||| |||||||| || | |||||||| Sbjct 5573897 AAGGCATCAAAAACATTCACTACATACGCCGATAATCAACCAGGAGTCTCAATTCAAGTA 5573838 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | ||||||||||| || ||||| || ||||| || || ||| ||| | || | Sbjct 5573837 TACGAAGGAGAACGAGCCATGACTCGGGATAACCATCGTCTTGGAACATT--CGAATTGA 5573780 Query 452288 --AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 ||||| || ||| | || |||||| |||||| | || | |||| | |||| Sbjct 5573779 GTGGAATTCCACCAGCTCCACGAGGTGTTCCTCAGATTGAAGTCACTTTTGATATCGATG 5573720 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 ||||||| ||||| |||||| || | || ||||| |||||||| | | || | Sbjct 5573719 CAAATGGAATTCTGAATGTGTCAGCTGAGGATAAATCGACTGGAAAAACGAATCGGATCA 5573660 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || || ||| || ||| ||||| |||||| | || | Sbjct 5573659 CAATTCGAAATGAGAAAGGACGATTGTCTCAATCAGACATTGATCGAATGGTTAACGAGG 5573600 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAA 452494 || || ||||| ||||| |||| |||||| Sbjct 5573599 CAAAACAATTCGAAAAGGAAGATGGAGAACAA 5573568 Score = 168 bits (186), Expect = 3e-36 Identities = 349/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG-TTC 452049 ||||| |||||||||||||||| || |||||||||||||||||| | || | || || Sbjct 6048251 AATCCAGATGAAGCTGTTGCATTCGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTC 6048192 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | ||| ||| | | |||| | || | || || || | || || ||||||| | Sbjct 6048191 A-AGGATCAAACAATCAAAGATGTATTGCTGGTTGACGTTGCTCCACTGAGTCTTGGAAT 6048133 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || ||||||||||| ||||||| ||| | ||| | ||| || ||||| | Sbjct 6048132 CGAGACAGCTGGTGGTGTGATGACCAATCTCATTGATCGAAACACCAGAATTCC--AACA 6048075 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || | || ||||||| | |||| ||||| |||||||| || | |||||||| Sbjct 6048074 AAGGCATCAAAAACATTCACTACATACGCCGATAATCAACCAGGAGTCTCAATTCAAGTA 6048015 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | ||||||||||| || ||||| || ||||| || || ||| ||| | || | Sbjct 6048014 TACGAAGGAGAACGAGCCATGACTCGGGATAACCATCGTCTTGGAACATT--CGAATTGA 6047957 Query 452288 --AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 ||||| || ||| | || |||||| |||||| | || | |||| | |||| Sbjct 6047956 GTGGAATTCCACCAGCTCCACGAGGTGTTCCTCAGATTGAAGTCACTTTTGATATCGATG 6047897 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 ||||||| ||||| |||||| || | || ||||| |||||||| | | || | Sbjct 6047896 CAAATGGAATTCTGAATGTGTCAGCTGAGGATAAATCGACTGGAAAAACGAATCGGATCA 6047837 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || || ||| || ||| ||||| |||||| | || | Sbjct 6047836 CAATTCGAAATGAGAAAGGACGATTGTCTCAATCAGACATTGATCGAATGGTTAACGAGG 6047777 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAA 452494 || || ||||| ||||| |||| |||||| Sbjct 6047776 CAAAACAATTCGAAAAGGAAGATGGAGAACAA 6047745 Score = 111 bits (122), Expect = 6e-19 Identities = 165/234 (71%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || ||||| ||||| ||||| || ||| | || || || | || Sbjct 4173736 AATGCAAATCTTCGTCAAGACACTCACTGGAAAAACCATCACTTTGGAAGTCGAGGCTTC 4173795 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| || | | ||| ||||| ||||| ||||| ||||| || || || || Sbjct 4173796 CGATACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGAATCCCACCAGACCA 4173855 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 || | | || ||| | || || || ||||| |||||||||||| | |||| || || Sbjct 4173856 GCAGAGACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGAAGAACTCTTTCGGACTACAA 4173915 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | ||||| | || |||||||| ||| | | || |||||| ||| || Sbjct 4173916 CATCCAGAAGGAATCGACTCTTCACTTGGTACTCCGCCTCAGAGGAGGAATGCA 4173969 Score = 111 bits (122), Expect = 6e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||||||| || || || ||||| || || ||| | || Sbjct 4175250 AATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTCGAAGTCGAAGCTTC 4175309 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| ||| |||| || || || |||||||||||||| || || || || Sbjct 4175310 TGACACCATCGAAAACGTTAAGGCCAAGATCCAGGATAAGGAAGGAATCCCACCAGACCA 4175369 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | | || ||| | || || ||| | |||||||| ||||| || ||||||| || Sbjct 4175370 ACAGAGACTCATCTTCGCCGGAAAGCAATTGGAAGATGGTAGAACCCTGTCGGATTACAA 4175429 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | ||||| ||||||| || Sbjct 4175430 CATCCAAAAGGAGTCAACACTCCA 4175453 Score = 98.7 bits (108), Expect = 4e-15 Identities = 108/144 (75%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || ||||| || ||||| |||||||| |||||| | || Sbjct 4174246 AATGCAGATTTTCGTGAAAACTCTTACTGGAAAGACTATCACTCTTGAGGTTGAAGCCTC 4174305 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | ||| || || || || |||||||||||||| || ||||| Sbjct 4174306 GGACACTATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 4174365 Query 391169 ACAACGTTTAATTTTCTCAGGGAA 391192 || || || |||||| | || || Sbjct 4174366 GCAGCGATTGATTTTCGCTGGTAA 4174389 Score = 96.9 bits (106), Expect = 1e-14 Identities = 163/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| ||||| |||| || |||||||| || | || || || | Sbjct 4173506 ATCATGCAAATCTTCGTCAAAACGTTGACAGGAAAAACTATCACCTTGGAGGTGGAGGCT 4173565 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || |||| ||| || | | ||| ||||| ||||| ||||| ||||| || || || Sbjct 4173566 TCCGATACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAGGGAATCCCACCAGAC 4173625 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || | | || ||| | || || || ||||| |||||||||||| | |||| || Sbjct 4173626 CAGCAGAGACTCATCTTCGCCGGAAAGCAGCTTGAGGATGGAAGAACTCTTTCGGACTAC 4173685 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || || | ||||| | || || ||||| || | | || |||||| ||| || Sbjct 4173686 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTCCGTCTCAGAGGAGGAATGCA 4173741 Score = 91.5 bits (100), Expect = 6e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || ||||| || || || || ||| | || Sbjct 4175023 ATGCAGATCTTCGTCAAGACGCTTACCGGAAAGACTATCACCCTCGAGGTCGAAGCTTCG 4175082 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||||| | | || || || ||||| ||||||||||| || || ||||| Sbjct 4175083 GACACTATTGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATCCCACCAGATCAG 4175142 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || ||| | || || || ||||| |||||| | || | |||| || || Sbjct 4175143 CAACGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACCCTCTCGGACTACAAC 4175202 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | ||||| | || || ||||| || | | || |||||| ||| || Sbjct 4175203 ATCCAGAAGGAGTCCACTCTCCACTTGGTGCTCCGTCTCAGAGGAGGAATGCA 4175255 Score = 89.7 bits (98), Expect = 2e-12 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| ||||| || ||| | || || || || | || Sbjct 1551823 ATGCAAATCTTCGTCAAGACTCTGACGGGTAAGACAATTCCCCTCGAAGTCGAGGCCTCC 1551764 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || ||||| |||||||||||||| || || || Sbjct 1551763 GATACCATCGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAG 1551704 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || || ||||| || |||||| | ||| | | || || || Sbjct 1551703 CAAAGATTGATCTTCGCCGGAAAGCAACTCGAGGATGGACGTACTCTCTCCGACTACAAC 1551644 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 1551643 ATCCAGAAGGAGTCCACTCTCCACTTGGT 1551615 >seq4 Length=16627154 Score = 107 bits (118), Expect = 8e-18 Identities = 242/361 (67%), Gaps = 6/361 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||| | || ||||||| || ||||| ||||| | | || ||| || Sbjct 6070278 CTCCAGAAGAAGTCTCGGCTATGGTCCTCACTAAGATGAAGCACATTGCTGAATCCTACC 6070219 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || ||| | | || || | || ||||| ||||| ||||||||||| || Sbjct 6070218 TCGGACACGAAGTGAAGAACGCTGTCGTCACCGTTCCAGCTTACTTCAATGATGCCCAGA 6070159 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || ||||| || || ||| ||||| | || ||| | |||| || || | Sbjct 6070158 GACAAGCCACCAAAGACGCCGGTACTATCGCTGGACTTAACGTTGTCAGAATCATCAACG 6070099 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || |||||| | || || || || ||| || || || || ||||| || Sbjct 6070098 AACCAACTGCTGCTGCTATTGCTTACGG-CTTGGACAA--GAAGGA---AGGAGAAAGAA 6070045 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | ||| | || || || || || || || ||| ||| |||| | || | || || Sbjct 6070044 ACATTCTCGTTTTCGACTTGGGAGGTGGTACTTTCGATGTTTCTCTTCTCACTATCGACA 6069985 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 | || || || ||||| || ||||| || |||||||| ||||||| || || ||| Sbjct 6069984 ACGGAGTTTTCGAAGTTCTTGCCACCAACGGAGATACTCACTTAGGAGGAGAGGACTTTG 6069925 Query 451602 A 451602 | Sbjct 6069924 A 6069924 >seq1 Length=15455979 Score = 105 bits (116), Expect = 3e-17 Identities = 105/136 (77%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 |||||||| ||||| || ||||| || ||||||||| ||||||||||| |||||||| Sbjct 1831766 GATGCAGTGATTACAGTACCCGCCTACTTCAATGATAGCCAACGGCAAGCTACTAAAGAC 1831707 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 |||| ||||||||| | |||| ||||||| || ||||| || || ||||| || Sbjct 1831706 GCAGCTACCATTGCTGGTCTCAATGCGATTCGAATCATCAATGAGCCAACTGCAGCCGCC 1831647 Query 451439 CTAGCATATGGACTAG 451454 | || |||||| ||| Sbjct 1831646 TTGGCTTATGGATTAG 1831631 >seq9 Length=17485439 Score = 86.0 bits (94), Expect = 2e-11 Identities = 382/599 (64%), Gaps = 12/599 (2%) Strand=Plus/Plus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957 || || || ||||||||||| || || || ||||| ||| || ||| | || | |||| Sbjct 505282 GACATCGTTCTTGTAGGAGGATCGACTCGTATTCC-AAAGGTCCAGAAAC-TTCT-TTCT 505338 Query 451958 TA---TTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATAT 452014 | ||| ||||| |||| ||| | || || || ||||||||||| || Sbjct 505339 GACCTTTTCTCCGGAAAGGAACTCAACAAGTCTATCAACCCAGACGAAGCTGTTGCCTAC 505398 Query 452015 GGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGAT---GAAAAATTAGGAGAT 452071 || || || || ||||| |||||||| | || |||| | || | |||| Sbjct 505399 GGAGCCGCTGTCCAAGCTGCTATTCTCTCCGG---AGATAAGTCGGAGGCTGTTCAAGAT 505455 Query 452072 ATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATG 452131 |||| | | || || | || || |||||||| | || || ||||| ||| | ||| Sbjct 505456 CTTCTTCTTCTCGACGTTGCTCCACTTTCTCTTGGTATCGAGACTGCTGGAGGAGTCATG 505515 Query 452132 ACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACA 452191 ||| | | || || || || | || || || | ||| || || | || Sbjct 505516 ACTGCTCTCATCAAGAGAAACACCACAATCCCAACCAAGACCGCTCAGACTTTCACAACC 505575 Query 452192 GCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACA 452251 ||| ||||||||||| || || || || | ||||||||| ||||| ||||| Sbjct 505576 TACTCTGACAACCAACCAGGAGTTTTGATCCAGGTTTATGAAGGAGAGCGTGCCATGACC 505635 Query 452252 CGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGA 452311 || || ||| || ||| | || ||||| || || || ||| | ||| Sbjct 505636 AAGGACAACAATTTGCTCGGAAAGTTCGAACTTTCTGGAATCCCACCAGCACCACGAGGA 505695 Query 452312 ACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCA 452371 ||| |||||||| |||||| || ||||||| || || || |||||||| || Sbjct 505696 GTTCCACAAATTGAGGTTACCTTCGACATTGATGCCAACGGAATCCTTAATGTCTCCGCC 505755 Query 452372 GTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTA 452431 || || || | ||||| | | || || || || || ||||| ||| | | Sbjct 505756 ACGGATAAGTCCACAGGAAAGCAAAACAAGATCACCATCACCAATGACAAAGGAAGACTT 505815 Query 452432 TCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGA 452490 ||||| || || || || ||||| ||||||| ||||| | ||||| |||||| || Sbjct 505816 TCTAAGGACGACATCGAGCGCATGGTCAATGAAGCTGAAAAGTACAAGGCTGATGACGA 505874 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975709109801636