Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20briggsae_20[genbank_20GCA_5F000004555.3_202014-07- 02] 367 sequences; 108,384,165 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq5 343 2e-89 seq9 271 1e-67 seq1 100 4e-16 seq11 96.9 4e-15 >seq5 Length=14578851 Score = 343 bits (380), Expect = 2e-89 Identities = 841/1261 (67%), Gaps = 19/1261 (2%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 ||||||||| || || |||| || || ||||| ||| || ||| | | ||| Sbjct 5573617 TCAATGTCTGATTGAGACAATCGTCCTTTCTCATTTCGAATTGTGATCCGATTCGTTTTT 5573676 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | ||||| ||||| ||||||| ||| ||||||||||| | ||| || | Sbjct 5573677 CCAGTCGATTTATCCTCAGCTGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTG 5573736 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||| || || ||| | || || | |||||| || | || || ||||| ||| Sbjct 5573737 ACTTCAATCTGAGGAACACCTCGTGGAGCTGGTGGAATTCCACTCAATTCGAATGTTCCA 5573796 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | ||||||| | | | ||||| ||||| || |||| ||||| || | Sbjct 5573797 AGACGATGGTTATCCCGAGTCATGGCTCGTTCTCCTTCGTATACTTGAATTGAGACTCCT 5573856 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 ||||||||||| || | ||| ||| | | ||| | |||||| | || ||| Sbjct 5573857 GGTTGATTATCGGCGTATGTAGTGAATGTTTTTGATGCCTTTGTTGGAATTCTGGTGTTT 5573916 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | ||| | |||||| | |||||| || |||| ||||||| ||| || | Sbjct 5573917 CGATCAATGAGATTGGTCATCACACCACCAGCTGTCTCGATTCCAAGACTCAGTGGAGCA 5573976 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCAC-CCGTTAAG-ATGGCGG 7028 ||||| | || || | |||| | | || | |||| || || ||| | || | Sbjct 5573977 ACGTCAACCAGCAATACATCTTTGATTGTTTGAT--CCTTGACTCCAGAAAGTACAGCTG 5574034 Query 7029 CTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTT 7088 |||| || | || ||| |||| || || ||||| || || || | ||||||||| | Sbjct 5574035 CTTGAACTGCAGCTCCGAATGCAACAGCTTCATCTGGATTGATTGAGCAATTCAGTTCCT 5574094 Query 7089 TACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGA 7148 | ||||| ||| | ||| | ||| | ||||| || || | || || ||||| || | Sbjct 5574095 TTCCGTTGAAAAAGTCCTGGAGCATCTTCTGAATCTTTGGAACACGAGTAGATCCTCCAA 5574154 Query 7149 CCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGA 7208 ||||||||| ||||| | || ||||| |||| ||||| |||||||| | || || | Sbjct 5574155 CCAAAACGACTTCATCAATGTTGGATTTGTCGAGCTTTGCATCTCGAAGAGCCTTCTCAA 5574214 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAA 7268 | ||||| | | ||| ||||| | || ||| |||||||| || || ||||| || | Sbjct 5574215 CTGGTTCAAGAGTTTTTCGGAAAAGATCAGCACAGAGTTCCTCGAATCGAGCACGAGTGA 5574274 Query 7269 TGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCG 7328 | || | ||||| | || ||| ||| ||||| | ||||| || | || ||| Sbjct 5574275 TCTTTGAGCACAAATCGATTCCTTCGAATAGAGAATCCACTTCAACAGTGGCTT---CCG 5574331 Query 7329 TCGA---AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCAC 7385 || ||| | |||| ||| || || ||||| || ||||| | ||| || | ||||| Sbjct 5574332 ATGAGCTAGAAAGTGTTCTCTTGGCACGTTCACAGGCGGTTCGGAGACGTCGGATGGCAC 5574391 Query 7386 GCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGA 7444 | || || || ||||| ||| || ||||| || || |||| | |||||| || Sbjct 5574392 GTGGATTCGGTGAGATATCCTTCCCGGTCTTTCGTTTGAATTCATTCATA-AAGTGTTGA 5574450 Query 7445 AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACT 7504 || | ||| ||||||||| || || || | || ||||| || || || | |||||| Sbjct 5574451 AGCATTCTTTGATCGAAATCCTCTCCTCCAAGATGAGTATCTCCAGCTGTGGACTTGACT 5574510 Query 7505 TCAAAGATACCTCCTT---CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || || ||||| |||| | | ||||||||||| ||||| || || || Sbjct 5574511 TCGAATATTGATCCTTCAGCAATTGAAAGGATTGAAACATCAAAAGTACCTCCTCCAAGA 5574570 Query 7562 TCAAAAATGAGTACGTTCGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620 ||||| || ||||| ||| | || || | || | ||||| | || || || | ||| Sbjct 5574571 TCAAAGATCAGTACATTCTTCTCTTCACTGATTCCT-TTATCCAATCCATAAGCAAGAGC 5574629 Query 7621 CGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 || || || |||||||| || || | || | || || || |||||||| || || |||| Sbjct 5574630 AGCTGCAGTCGGTTCATTGATGATTCGGATGGCA-TTGAGTCCAGCAATGGTAGCTGCAT 5574688 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 |||| || ||||||| || ||||| ||||| || || || || | || || ||| Sbjct 5574689 CTTTGGTTGCTTGTCTCTGACTGTCGTTGAAGTATGCAGGTACAGTAATCACTGCATCCT 5574748 Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799 ||||| | || || || | || || | || |||||||| ||| ||||| | || Sbjct 5574749 TGACTGCATGTCCCAGGTATGTCTCTGCAGTTTCCTTCATTTTCTGAAGTACCATTGCTG 5574808 Query 7800 AAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTT 7859 | || ||||| | |||||| || |||| || || | || ||||| |||| |||| Sbjct 5574809 AGATTTCTTCTGGATTGAACTGTCTCTTTTCTCCTTTCATTTCCACTTCGATCACTGGTT 5574868 Query 7860 T 7860 | Sbjct 5574869 T 5574869 Score = 340 bits (376), Expect = 2e-88 Identities = 840/1261 (67%), Gaps = 19/1261 (2%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 ||||||||| || || |||| || || ||||| ||| || ||| | | ||| Sbjct 6047794 TCAATGTCTGATTGAGACAATCGTCCTTTCTCATTTCGAATTGTGATCCGATTCGTTTTT 6047853 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | ||||| ||||| ||||||| ||| ||||||||||| | ||| || | Sbjct 6047854 CCAGTCGATTTATCCTCAGCTGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTG 6047913 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||| || || ||| | || || | |||||| || | || || ||||| ||| Sbjct 6047914 ACTTCAATCTGAGGAACACCTCGTGGAGCTGGTGGAATTCCACTCAATTCGAATGTTCCA 6047973 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | ||||||| | | | ||||| ||||| || |||| ||||| || | Sbjct 6047974 AGACGATGGTTATCCCGAGTCATGGCTCGTTCTCCTTCGTATACTTGAATTGAGACTCCT 6048033 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 ||||||||||| || | ||| ||| | | ||| | |||||| | || ||| Sbjct 6048034 GGTTGATTATCGGCGTATGTAGTGAATGTTTTTGATGCCTTTGTTGGAATTCTGGTGTTT 6048093 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | ||| | |||||| | |||||| || |||| ||||||| ||| || | Sbjct 6048094 CGATCAATGAGATTGGTCATCACACCACCAGCTGTCTCGATTCCAAGACTCAGTGGAGCA 6048153 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCAC-CCGTTAAG-ATGGCGG 7028 ||||| | || || | |||| | | || | |||| || || ||| | || | Sbjct 6048154 ACGTCAACCAGCAATACATCTTTGATTGTTTGAT--CCTTGACTCCAGAAAGTACAGCTG 6048211 Query 7029 CTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTT 7088 |||| || | || ||| |||| || || ||||| || || || | ||||||||| | Sbjct 6048212 CTTGAACTGCAGCTCCGAATGCAACAGCTTCATCTGGATTGATTGAGCAATTCAGTTCCT 6048271 Query 7089 TACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGA 7148 | ||||| ||| | ||| | ||| | ||||| || || | || || ||||| || | Sbjct 6048272 TTCCGTTGAAAAAGTCCTGGAGCATCTTCTGAATCTTTGGAACACGAGTAGATCCTCCAA 6048331 Query 7149 CCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGA 7208 ||||||||| ||||| | || ||||| |||| ||||| |||||||| | || || | Sbjct 6048332 CCAAAACGACTTCATCAATGTTGGATTTGTCGAGCTTTGCATCTCGAAGAGCCTTCTCAA 6048391 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAA 7268 | ||||| | | ||| ||||| | || ||| |||||||| || || ||||| || | Sbjct 6048392 CTGGTTCAAGAGTTTTTCGGAAAAGATCAGCACAGAGTTCCTCGAATCGAGCACGAGTGA 6048451 Query 7269 TGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCG 7328 | || | ||||| | || ||| ||| ||||| | ||||| || | || ||| Sbjct 6048452 TCTTTGAGCACAAATCGATTCCTTCGAATAGAGAATCCACTTCAACAGTGGCTT---CCG 6048508 Query 7329 TCGA---AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCAC 7385 || ||| | |||| ||| || || ||||| || ||||| | ||| || | ||||| Sbjct 6048509 ATGAGCTAGAAAGTGTTCTCTTGGCACGTTCACAGGCGGTTCGGAGACGTCGGATGGCAC 6048568 Query 7386 GCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCGA 7444 | || || || ||||| ||| || ||||| || || |||| | |||||| || Sbjct 6048569 GTGGATTCGGTGAGATATCCTTCCCGGTCTTTCGTTTGAATTCATTCATA-AAGTGTTGA 6048627 Query 7445 AGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACT 7504 || | ||| ||||||||| || || || | || ||||| || || || | |||||| Sbjct 6048628 AGCATTCTTTGATCGAAATCCTCTCCTCCAAGATGAGTATCTCCAGCTGTGGACTTGACT 6048687 Query 7505 TCAAAGATACCTCCTT---CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGG 7561 || || || ||||| |||| | | ||||||||||| ||||| || || || Sbjct 6048688 TCGAATATTGATCCTTCAGCAATTGAAAGGATTGAAACATCAAAAGTACCTCCTCCAAGA 6048747 Query 7562 TCAAAAATGAGTACGTTCGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAGC 7620 ||||| || ||||| ||| | || || | || | ||||| | || || || | ||| Sbjct 6048748 TCAAAGATCAGTACATTCTTCTCTTCACTGATTCCT-TTATCCAATCCATAAGCAAGAGC 6048806 Query 7621 CGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 || || || |||||||| || || | || | || || || |||||||| || || |||| Sbjct 6048807 AGCTGCAGTCGGTTCATTGATGATTCGGATGGCA-TTGAGTCCAGCAATGGTAGCTGCAT 6048865 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 |||| || ||||||| || ||||| ||||| || || || || | || || ||| Sbjct 6048866 CTTTGGTTGCTTGTCTCTGACTGTCGTTGAAGTATGCAGGTACAGTAATCACTGCATCCT 6048925 Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799 ||||| | || || || | || || | || |||||||| ||| ||||| | || Sbjct 6048926 TGACTGCATGTCCCAGGTATGTCTCTGCAGTTTCCTTCATTTTCTGAAGTACCATTGCTG 6048985 Query 7800 AAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTT 7859 | || ||||| | |||||| || ||| || || | || ||||| |||| |||| Sbjct 6048986 AGATTTCTTCTGGATTGAACTGTCTCTTTTTTCCTTTCATTTCCACTTCGATCACTGGTT 6049045 Query 7860 T 7860 | Sbjct 6049046 T 6049046 Score = 325 bits (360), Expect = 5e-84 Identities = 840/1262 (67%), Gaps = 22/1262 (2%) Strand=Plus/Minus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 ||||||||| || || |||| || || ||||| ||| || ||| | | ||| Sbjct 6051462 TCAATGTCTGATTGAGACAATCGTCCTTTCTCATTTCGAATTGTGATCCGATTCGTTTTT 6051403 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | ||||| ||||| ||||||| ||| ||||||||||| | ||| || | Sbjct 6051402 CCAGTCGATTTATCCTCAGCCGACACATTCAGAATTCCATTTGCATCGATATCAAAAGTG 6051343 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 || | ||| || || ||| | || || | |||||| || | || || ||||| ||| Sbjct 6051342 ACTTCAATCTGAGGAACACCTCGTGGAGCTGGTGGAATTCCACTCAATTCGAATGTTCCA 6051283 Query 6791 AGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCA 6850 || | ||||||| | | || |||||| ||||| || |||| ||||| || | Sbjct 6051282 AGACGATGGTTATCCCGAGTCATCGCACGTTCTCCTTCGTATACTTGAATTGAGACTCCT 6051223 Query 6851 GGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTT 6910 ||||||||||| | || | ||| ||| | ||| | |||||| | || ||| Sbjct 6051222 GGTTGATTATCATCATATGTAGTGAATGTTTTCGATGCCTTTGTTGGAATTCTGGTGTTT 6051163 Query 6911 CTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTC 6970 | ||| | |||||| | |||||| || |||| ||||||| ||| || | Sbjct 6051162 CGATCAATGAGATTGGTCATCACACCACCAGCTGTCTCGATTCCAAGACTCAGTGGAGCA 6051103 Query 6971 ACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCAC-CCGTTAAG-ATGGCGG 7028 || || | || || | |||| | | | | |||| || || ||| | || | Sbjct 6051102 ACATCAACCAGCAATACATCTTTGATTGTGTGAT--CCTTGACTCCAGAAAGTACAGCTG 6051045 Query 7029 CTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTT 7088 |||| || | || ||| |||| || || ||||| || || || | ||||||||||| Sbjct 6051044 CTTGAACTGCAGCTCCGAATGCAACAGCTTCATCTGGATTGATTGAGCAATTCAGTTCTT 6050985 Query 7089 TACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGA 7148 | ||||| ||| | ||| | ||| | ||||| || || | || || ||||| | | Sbjct 6050984 TTCCGTTGAAAAAGTCCTTGAGCATCTTCTGAATCTTTGGAACACGAGTAGATCC-TCAA 6050926 Query 7149 CCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGA 7208 ||||||||| |||| | || ||||| |||| |||| ||||||||| | || | | Sbjct 6050925 CCAAAACGACCTCATCAATCTTGGATTTGTCGAGTTTTGCGTCTCGAAGAGCCTTCGCAA 6050866 Query 7209 CAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGCACGGGTAA 7268 | ||||| | | ||| ||||| | || ||| |||||||| || || ||||| || | Sbjct 6050865 CTGGTTCAAGAGTTTTTCGGAATAGATCAGCACAGAGTTCCTCGAATCGAGCACGAGTGA 6050806 Query 7269 TGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGTTTGTGCCG 7328 | || | ||||| | || ||| | | ||||| | ||||| || | || ||| Sbjct 6050805 TCTTTGAGCACAAATCGATTCCTTCGAAAAGAGAATCCACTTCAACAGTGGCTT---CCG 6050749 Query 7329 TCGA---AGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCAC 7385 || ||| | |||| ||| || || ||||| || ||||| | ||| || | ||||| Sbjct 6050748 ATGAACTAGAAAGTGTTCTCTTGGCACGTTCACAGGCGGTTCGGAGACGTCGGATGGCAC 6050689 Query 7386 GCGGGTTACCGGAAATAT-CTTTCTTATGTTTACGTTTAAACTC-TTCAGAGAAGTGTCG 7443 | || || || |||| ||||| | ||| | ||| || || |||| | |||||| | Sbjct 6050688 GTGGATTTGGCGAGATATCCTTTCCGGTCTTT-CTTTTGAATTCATTCATA-AAGTGTTG 6050631 Query 7444 AAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGAC 7503 || | ||| ||||||||| || || || | || ||||| || || || | ||||| Sbjct 6050630 GAGCATTCTTTGATCGAAATCCTCTCCTCCAAGATGAGTATCTCCAGCTGTGGACTTGAC 6050571 Query 7504 TTCAAAGATACCTCCTT---CAATGTTTAACAACGAAACATCAAACGTACCACCACCCAG 7560 ||| ||||| ||||| |||| | | ||||||||||| ||||| || || || Sbjct 6050570 TTCGAAGATTGATCCTTCAGCAATTGAAAGGATTGAAACATCAAAAGTACCTCCTCCAAG 6050511 Query 7561 GTCAAAAATGAGTACGTTCGTATCGTC-GTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619 ||||| || ||||| ||| | || || | || | ||||| | || || || | || Sbjct 6050510 ATCAAAGATCAGTACATTCTTCTCTTCACTGATTCCT-TTATCCAATCCATAAGCAAGAG 6050452 Query 7620 CCGCCGCCGTTGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCA 7678 | || || || |||||||| || || | || | || || || |||||||| || || ||| Sbjct 6050451 CAGCTGCAGTCGGTTCATTGATGATTCGGATGGCA-TTGAGTCCAGCAATGGTAGCTGCA 6050393 Query 7679 TCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCC 7738 ||||| || ||||||| || ||||| ||||| || || || || | || || ||| Sbjct 6050392 TCTTTGGTTGCTTGTCTCTGACTGTCGTTGAAGTATGCAGGTACAGTAATCACTGCATCC 6050333 Query 7739 GTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGAT 7798 ||||| | || || || | || || | || |||||||| ||| ||||| | | Sbjct 6050332 TTGACTGCATGTCCCAGGTATGTCTCTGCAGTTTCCTTCATTTTCTGAAGTACCATTGCT 6050273 Query 7799 GAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGT 7858 || || ||||| | |||||| || |||| || || | || ||||| |||| ||| Sbjct 6050272 GAGATTTCTTCTGGATTGAACTGTCTCTTTTCTCCTTTCATTTCCACTTCGATCACTGGT 6050213 Query 7859 TT 7860 || Sbjct 6050212 TT 6050211 Score = 140 bits (154), Expect = 4e-28 Identities = 283/412 (69%), Gaps = 11/412 (3%) Strand=Plus/Minus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 ||||||||| || || || | || ||||| || || || | |||||||| || || Sbjct 6044328 ATCGAAATCCTCTCCTCCAAGATGAGTATCTCCAGCTGTGGACTTGACTTCGAATATTGA 6044269 Query 7516 TCCTTCAATGTTTAACAAC---GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAG 7572 ||||||| || | | ||||||||||| ||||| || || || ||||| || || Sbjct 6044268 TCCTTCAGCAATTGAAAGGATTGAAACATCAAAAGTACCTCCTCCAAGATCAAAGATCAG 6044209 Query 7573 TACGTTCGTATCGTCGTCTTTG-TTC--TTATCGAGACCGTACGCGATAGCCGCCGCCGT 7629 ||| ||| ||| || || || ||| ||||| | || || || | ||| || || || Sbjct 6044208 TACATTC--ATC-TCTTCACTGATTCCTTTATCCAATCCATAAGCAAGAGCAGCTGCAGT 6044152 Query 7630 TGGTTCATTAATAATAC-GAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCG 7688 |||||||| || || | || | || || || |||||||| || || |||||||| || | Sbjct 6044151 CGGTTCATTGATGATTCGGATGGCA-TTGAGTCCAGCAATGGTAGCTGCATCTTTGGTTG 6044093 Query 7689 CTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCT 7748 |||||| || ||||| ||||| || || || || | || | ||| ||||| | Sbjct 6044092 CTTGTCTCTGACTGTCGTTGAAGTATGCAGGTACAGTAATCACTGTATCCTTGACTGCAT 6044033 Query 7749 TACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTT 7808 || || || | || || | || |||||||| ||| ||||| | ||| || |||| Sbjct 6044032 GTCCCAGGTATGTCTCTGCAGTTTCCTTCATTTTCTGAAGTACCATTGCTGAGATTTCTT 6043973 Query 7809 CAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACTTCAATCATGGGTTT 7860 | | |||||| || |||| || || | || ||||| |||| ||||| Sbjct 6043972 CTGGATTGAACTGTCTCTTTTCTCCTTTCATTTCCACTTCGATCACTGGTTT 6043921 >seq9 Length=17485439 Score = 271 bits (300), Expect = 1e-67 Identities = 539/795 (68%), Gaps = 5/795 (1%) Strand=Plus/Minus Query 7175 TTATCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAG 7234 || || ||||| | ||| ||||| | || ||||| || ||||| | ||| | Sbjct 505084 TTGTCCATCTTGGCGTCACGAAGAGACTTCTCGACTGGGTCCATGGTGGATCTGAAGAGA 505025 Query 7235 TCCATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCG 7294 || || || ||||||||||| ||||| || ||| || |||||||| | || ||| Sbjct 505024 TCAGCGCAAAGCTCCTCAAAACGAGCACGAGTGATGTTGGTGTAGAAATCGATTCCTTCG 504965 Query 7295 TATAACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGC 7354 ||| |||||||| || || | | || | | ||| || | |||| |||||||||| Sbjct 504964 AATAGAGAATCAATCTCGATCGAAGCCTGGGAAGACGACGAAAGAGTTCTCTTTGCGCGC 504905 Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414 || || || || || | ||||||||| ||||| || || | || || ||||| || Sbjct 504904 TCGCAAGCAGTACGAAGACGACGAAGAGCACGTGGATTGGAAGCAAGGTCCTTCTTGTGC 504845 Query 7415 TTACGTTTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCC 7474 || || || ||||| | |||||| || | | ||||| ||||| || || Sbjct 504844 TTGCGCTTGAACTCAGCGACGAAGTGGTTAACCATGCGGTTGTCGAAGTCTTCTCCTCCA 504785 Query 7475 AAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAAC 7534 | || || || || ||||| | ||||| || || || || | ||||| | | | Sbjct 504784 AGATGAGTGTCTCCAGCGGTAGACTTGACCTCGAAAATTCCATCCTCAATAGTGAGAATA 504725 Query 7535 GAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTT 7593 || ||||| || |||||||| || || || |||||||| ||||| ||| || | || Sbjct 504724 GAGACATCGAAAGTACCACCTCCAAGATCGAAAATGAGAACGTTGCGT-TCTCCAGCTCC 504666 Query 7594 GTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACA 7653 ||||| ||||| ||||| |||||||| || || ||||| || || || ||||||||| Sbjct 504665 CTTCTTGTCGAGTCCGTAGGCGATAGCGGCAGCAGTTGGCTCGTTGATGATACGAAGAAC 504606 Query 7654 GTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTA 7713 ||| || || | |||| | | ||||| || || ||||| || ||||||||||| ||||| Sbjct 504605 GTTGAGTCCGGAGATAGCTCCGGCATCCTTGGTAGCTTGACGCTGCGAATCGTTGAAGTA 504546 Query 7714 GGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATC 7773 ||| || || || | || |||||| |||| | | ||||| | | || ||| | || Sbjct 504545 GGCTGGTACGGTGATAACGGCGTCCTTGACGGTGCTTCCGAGGAAAGCCTCGGCGGTTTC 504486 Query 7774 TTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACC 7833 ||||| || |||||||| || || || ||||| | | || ||| || || || Sbjct 504485 CTTCATCTTCAGCAGAACCATGGAGGAGATTTCTTCTGGAGTGAAGATTTTGGTCTCTCC 504426 Query 7834 GTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || | || || | | | | ||||| | | || | | |||||| || | | ||| Sbjct 504425 CTTGTACTCGACCTGGACCTTTGGTTTTGCTCCCTCAGCAGAGATAACTTTGAATGGCCA 504366 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 || ||||| ||| ||| || | | || |||||| | |||||||||||| ||||| Sbjct 504365 ATGCTTCATGTCGGATTGAACAGCTGGATCGTCAAACTTGCGTCCGATAAGACGTTTTGC 504306 Query 7954 ATC---AAAAACTGT 7965 || |||||| || Sbjct 504305 GTCTGAAAAAACAGT 504291 Score = 89.7 bits (98), Expect = 7e-13 Identities = 129/182 (71%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || ||||| || || ||||| ||| | ||||| |||||| | || | |||||||| |||| Sbjct 4621126 TTCTATCAAGCGTCGACATCGGAGTTGTACGGAAAAGTACAAGAGATTCCACAAAGTGAA 4621067 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 || || ||||| || || | ||||| |||| || |||||| || ||||| ||| Sbjct 4621066 AAGACTCCGTTCTATCCAAGATCACCGTATGCTGTTGCTAAAATGTATGGATACTGGATT 4621007 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || || || |||| | || ||||| ||||||||||| || | ||||| || Sbjct 4621006 GTTGTCAACTACCGAGAGGCTTATAAAATGTTCGCATGCAATGGAATTCTCTTCAATCAT 4620947 Query 22624 GA 22625 || Sbjct 4620946 GA 4620945 Score = 86.0 bits (94), Expect = 8e-12 Identities = 134/191 (70%), Gaps = 3/191 (2%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 || || ||||| | || |||||||| ||| || || || || || ||||| |||||| Sbjct 504223 AAGACAGTGTTGTGTGGATTCATGGCGACTTGATTTTTGGCAGCATCTCCGATGAGACGT 504164 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 ||| | | || || || ||||||||||| || |||| || ||||| ||||| ||| Sbjct 504163 TCAGAGT---CGGTGAAAGCAACGTACGATGGAGTGGTTCTGTTTCCTTGATCGTTAGCA 504107 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || || || || ||| ||| | || ||||| || || || || ||||| | ||| Sbjct 504106 ATGATCTCGACCTTTCCGTGTTGAAAAACTCCGACACAGGAGTAAGTGGTTCCGAGATCG 504047 Query 8138 ATACCGATTGC 8148 || || | ||| Sbjct 504046 ATTCCAACTGC 504036 >seq1 Length=15455979 Score = 100 bits (110), Expect = 4e-16 Identities = 132/183 (72%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 6611 TCAATGTCTTCTTTCGATAATCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTA 6670 ||||| ||| ||| |||| ||| ||||| || || |||||||||| | | |||||| Sbjct 1830592 TCAATATCTGCTTGTGATAGTCTTCCCTTCTCGTTGCGAATCGTAATCCTATTGGATTTT 1830651 Query 6671 CCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTT 6730 || | | |||||| || ||| ||||| | ||||||||||||||| | ||||| | Sbjct 1830652 CCTGTAGACTTATCCTCCGCAGAGACATTGAGAATACCATTTGCATCGATGTCGAAAGTC 1830711 Query 6731 ACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCA 6790 |||| |||||||| | || | || || | ||| || || || || || || || ||| Sbjct 1830712 ACATCGATTTGTGGAATTCCACGTGGCGCTGGTGGGATTCCAGTCAATTCGAAGGTTCCA 1830771 Query 6791 AGT 6793 ||| Sbjct 1830772 AGT 1830774 Score = 87.8 bits (96), Expect = 2e-12 Identities = 144/205 (70%), Gaps = 6/205 (3%) Strand=Plus/Plus Query 6570 CATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATA 6629 |||| || | || | ||| || || ||||||||||| ||||| ||| | | ||||| Sbjct 908044 CATCCTCTTTTTCAAACTGTTTAGCTTCTTGGACCATTCGATCAATATCTGCCTGCGATA 908103 Query 6630 ATCTCCCCTTATCAT-TCG--TAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| ||||| |||| | | |||| || | ||| || |||| || || |||||| Sbjct 908104 GTCTTCCCTTTTCATATTGGATAATAATACTATTT---GAACTACCAGAACCCCTATCTT 908160 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 |||| | ||||||| ||| ||||||||||| | ||| || | |||| |||| || | Sbjct 908161 TAGCAGTGACATTCAGAATCCCATTTGCATCGATATCAAAAGTCACATCAATTGTCGGAG 908220 Query 6747 TACCCCTCGGTGCGGCTGGAATACC 6771 | |||| || || | ||| || || Sbjct 908221 TTCCCCGTGGCGCTGGTGGGATTCC 908245 Score = 84.2 bits (92), Expect = 3e-11 Identities = 132/186 (71%), Gaps = 6/186 (3%) Strand=Plus/Plus Query 6570 CATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATA 6629 |||| || | || | ||| || || ||||||||||| ||||| ||| | | ||||| Sbjct 902707 CATCCTCTTTTTCAAACTGTTTAGCTTCTTGGACCATTCGATCAATATCTGCCTGCGATA 902766 Query 6630 ATCTCCCCTTATCAT-TCG--TAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTT 6686 ||| ||||| |||| | | |||| || | ||| || |||| || || |||||| Sbjct 902767 GTCTTCCCTTTTCATATTGGATAATAATACTATTT---GAACTACCAGAACCCCTATCTT 902823 Query 6687 CAGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTG 6746 |||| | ||||||| ||| ||||||||||| | ||| || | |||| |||| || | Sbjct 902824 TAGCAGTGACATTCAGAATCCCATTTGCATCGATATCAAAAGTCACATCAATTGTCGGAG 902883 Query 6747 TACCCC 6752 | |||| Sbjct 902884 TTCCCC 902889 >seq11 Length=19495157 Score = 96.9 bits (106), Expect = 4e-15 Identities = 147/208 (71%), Gaps = 6/208 (3%) Strand=Plus/Minus Query 7584 CGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAA 7643 || ||||||||| || ||| |||| || | ||| || || ||||| || || || | Sbjct 1839104 CGGCGTCTTTGT-CTAATC-----CGTAAGCAAGAGCAGCGGCAGTTGGCTCGTTGATCA 1839051 Query 7644 TACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAAT 7703 ||||||| ||| || |||| ||| | | || || || || ||||| ||||| |||| Sbjct 1839050 CACGAAGAACGTTGAGTCCAGAAATTTGTCCGGCGTCCTTGGTGGCTTGACGTTGAGAAT 1838991 Query 7704 CGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATT 7763 ||||||||||||| || || || || || |||| |||| | |||| | ||| || Sbjct 1838990 CGTTAAAGTAGGCTGGAACAGTAACAACGGCGTTGTTGACGGTGGTACCCAAATAGCTTT 1838931 Query 7764 CCGCGATATCTTTCATTTTGGTAAGAAC 7791 | ||| | || ||||| || |||| || Sbjct 1838930 CAGCGGTTTCCTTCATCTTCATAAGCAC 1838903 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635129886328280