Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20briggsae_20[genbank_20GCA_5F000004555.3_202014-07- 02] 367 sequences; 108,384,165 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq11 102 7e-17 >seq11 Length=19495157 Score = 102 bits (112), Expect = 7e-17 Identities = 116/155 (75%), Gaps = 3/155 (2%) Strand=Plus/Plus Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553 |||||| | || ||||| ||||| || | |||||| |||||| |||||||| || || Sbjct 2098167 CGGACGCTCGAGAGCCTTCGCGATATCAGACATGTTCGAGATGACGGTCTTGATTCCATT 2098226 Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613 |||||| ||||||||||| || | | ||||| |||||||||||||||| || || Sbjct 2098227 GCCCTTGCCTTCGACCTTAGCCGACAGCTTTGGCATCTTGTAGCGGTAGAACGGATCAGC 2098286 Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCATCGTGG 34648 ||| ||||| ||||| | || ||||| ||| Sbjct 2098287 GACAGCACGGTTCACGTTGAGAG---CCATCTTGG 2098318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412839753436931