Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20briggsae_20[genbank_20GCA_5F000004555.3_202014-07- 02] 367 sequences; 108,384,165 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq5 107 6e-18 >seq5 Length=14578851 Score = 107 bits (118), Expect = 6e-18 Identities = 88/107 (82%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 ||||||||| | ||||| | ||||||| ||||| ||||| |||||||| || |||| Sbjct 9910872 ATACCAATGCTTCGTGTCTACAACAACACCGCTCGTTACGTTGATCAAGGAGGTAACAAA 9910931 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 || |||||||| ||| |||||||| ||||||| ||||||||||| || Sbjct 9910932 CGACCAGGAGCATTCGCCATCTACTTGGAGCCATGGCACGCCGATAT 9910978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588328531346315