Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 3e-11 >seq1 Length=15072434 Score = 84.2 bits (92), Expect = 3e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 7132 AATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAA 7191 || ||||| | ||| || || |||| |||||||||| | ||| || || ||||| Sbjct 5138792 AACTGATCAACACCTTGTCCAGAGTAATCTGTATGACAATCCACATATTTCGCCCCAAAG 5138733 Query 7192 TGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATGATTAAATCC 7250 |||||||||||||| ||||||| || || | ||| |||||||||||| ||||||| Sbjct 5138732 TGTCTCCATTGAAATCCATAAACTGGTCCAAGATCTCCTTCTTCACGAGACGTAAATCC 5138674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595871947861200