Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq5 219 7e-53 seq6 208 1e-49 seq4 185 1e-42 seq2 168 1e-37 seq1 159 5e-35 >seq5 Length=20924180 Score = 219 bits (242), Expect = 7e-53 Identities = 194/240 (81%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| || ||||||||||||||||||||||||||||| Sbjct 8535259 GCCAAGCGCCATCGCAAGGTC-CTTCGTGACAACATCCAAGGAATCACCAAGCCAGCTAT 8535317 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||||||||||||| | |||||| | |||| || || | Sbjct 8535318 TCGCCGTCTCGCTCGTCGTGGTGGAGTCAAGCGTATTTCTGGACTCATCTACGAGGAAAC 8535377 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| || Sbjct 8535378 TCGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTCACCTACTGTGA 8535437 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | |||||||||||| ||||||| |||||||||| ||||| |||||||| Sbjct 8535438 GCACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 8535497 Score = 217 bits (240), Expect = 2e-52 Identities = 197/242 (81%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| || ||||||||||||||||||||||||||||| Sbjct 8847659 GCCAAGCGCCATCGCAAGGTC-CTTCGTGACAACATCCAAGGAATCACCAAGCCAGCTAT 8847601 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||||||||||||| | |||||| | |||| || || | Sbjct 8847600 TCGCCGTCTCGCTCGTCGTGGTGGAGTCAAGCGTATTTCTGGACTCATCTACGAGGAAAC 8847541 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG- 16610 ||||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| ||| | Sbjct 8847540 TCGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTC-ACT-TACTGT 8847483 Query 16611 -AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 ||||||| || | |||||||||||| ||||||| |||||||||| ||||| |||||| Sbjct 8847482 GAGCACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCCTTGAAGCGTCAA 8847423 Query 16670 GG 16671 || Sbjct 8847422 GG 8847421 Score = 217 bits (240), Expect = 2e-52 Identities = 197/242 (81%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| || ||||||||||||||||||||||||||||| Sbjct 8889754 GCCAAGCGCCATCGCAAGGTC-CTTCGTGACAACATCCAAGGAATCACCAAGCCAGCTAT 8889696 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||||||||||||| | |||||| | |||| || || | Sbjct 8889695 TCGCCGTCTCGCTCGTCGTGGTGGAGTCAAGCGTATTTCTGGACTCATCTACGAGGAAAC 8889636 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG- 16610 ||||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| ||| | Sbjct 8889635 TCGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTC-ACT-TACTGT 8889578 Query 16611 -AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 ||||||| || | |||||||||||| ||||||| |||||||||| ||||| |||||| Sbjct 8889577 GAGCACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTATGCCTTGAAGCGTCAA 8889518 Query 16670 GG 16671 || Sbjct 8889517 GG 8889516 Score = 214 bits (236), Expect = 3e-51 Identities = 193/240 (80%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || ||||| || ||||||||||||||||||||||||||||| Sbjct 8898273 GCCAAGCGCCATCGCAAGGTC-CTTCGTGACAACATCCAAGGAATCACCAAGCCAGCTAT 8898331 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||||||||||||| | |||||| | |||| || || | Sbjct 8898332 TCGCCGTCTCGCTCGTCGTGGTGGAGTCAAGCGTATTTCTGGACTCATCTACGAGGAAAC 8898391 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| || Sbjct 8898392 TCGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGTCACCTACTGTGA 8898451 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||||||||| ||||||| |||||||||| ||||| |||||||| Sbjct 8898452 GCACGCCAAGAGAAAGACTGTCACAGCCATGGACGTCGTCTATGCTTTGAAGCGTCAAGG 8898511 Score = 214 bits (236), Expect = 3e-51 Identities = 212/272 (78%), Gaps = 2/272 (1%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||| | | || ||||| || ||||||||||||||||||||||||||||| Sbjct 16042565 GCCAAGCGCCATCGAAAGGTC-CTTCGCGACAACATCCAAGGAATCACCAAGCCAGCTAT 16042623 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||||||||||||| |||||||| | ||||||| || | Sbjct 16042624 TCGCCGTCTTGCTCGTCGTGGTGGAGTCAAGCGTATCTCTGGACTCATCTATGAGGAAAC 16042683 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611 ||||| ||| | ||| | |||||| ||| ||| |||| |||||| || ||| || Sbjct 16042684 TCGTGGAGTTCTCAAGGTATTCCTCGAGAACGTCATCCGTGATGCCGTCACCTACTGTGA 16042743 Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 |||||| || | ||||| |||||| ||||||| | |||||||| ||||| || ||||| Sbjct 16042744 GCACGCCAAGAGAAAGACCGTCACCGCCATGGACGTTGTCTATGCTTTGAAGCGCCAAGG 16042803 Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCTT 16703 | | | || || |||||| | |||| || Sbjct 16042804 AAGAACTCTGTACGGATTTGGAGGATAATTTT 16042835 Score = 152 bits (168), Expect = 8e-33 Identities = 151/192 (79%), Gaps = 4/192 (2%) Strand=Plus/Plus Query 16482 AGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCT 16541 ||||||| || || ||||| |||||||||||||||||||| ||| |||||||| | ||| Sbjct 9547302 AGCCAGCAATTCGCCGTCTCGCTCGTCGTGGTGGAGTCAAACGTATCTCTGGACTTATCT 9547361 Query 16542 ATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCC 16601 | || || | ||||| ||| ||||| ||||||| | | || || | ||||||| | | Sbjct 9547362 ACGAGGAAACTCGTGGAGTTCTGAAGGTCTTCCTTGAAAATGTCATTCGTGATGCTGT-C 9547420 Query 16602 ACTATAC--CGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATT 16659 ||| ||| |||||||| ||| | |||||||| ||| | ||||| | |||||||| || Sbjct 9547421 ACT-TACTGTGAGCACGCCAAAAGAAAGACTGTAACCGCGATGGACGTTGTCTATGCCTT 9547479 Query 16660 GAAACGTCAAGG 16671 |||||||||||| Sbjct 9547480 GAAACGTCAAGG 9547491 >seq6 Length=17718942 Score = 208 bits (230), Expect = 1e-49 Identities = 195/242 (81%), Gaps = 6/242 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491 || ||||| ||||||| | || |||||||| ||||||||||||||||||||||||||||| Sbjct 7309830 GCCAAGCGCCATCGCAAGGTC-CTTCGAGACAACATCCAAGGAATCACCAAGCCAGCTAT 7309772 Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551 || ||||| |||||||||||||||||||||||| | |||||| | ||||||| || | Sbjct 7309771 TCGCCGTCTTGCTCGTCGTGGTGGAGTCAAGCGTATTTCTGGACTCATCTATGAGGAAAC 7309712 Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--C 16609 ||||| ||| | ||| | |||||| ||| ||| |||| |||||| | ||| ||| Sbjct 7309711 TCGTGGAGTTCTCAAGGTGTTCCTCGAGAACGTCATCCGTGATGCCGT-AACT-TACTGT 7309654 Query 16610 GAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAA 16669 |||||||| || | ||||| || ||| ||||||| ||||||| || ||||| |||||| Sbjct 7309653 GAGCACGCCAAGAGAAAGACCGTTACCGCCATGGACGTCGTCTACGCTTTGAAGCGTCAA 7309594 Query 16670 GG 16671 || Sbjct 7309593 GG 7309592 >seq4 Length=17493829 Score = 185 bits (204), Expect = 1e-42 Identities = 207/277 (75%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | ||| ||||||||||||||||| |||||||||||||| || Sbjct 11407161 GCCAAGCGCCATCGCAAAGTTCTCCGAGATAACATCCAAGGTATCACCAAGCCAGCCATT 11407220 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | | || ||||||||| | |||| |||||| |||| || || | Sbjct 11407221 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGAGAATCTCCGGATTGATCTACGAGGAAACC 11407280 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||||| | ||||| ||| ||| |||| ||||||| || ||| |||| Sbjct 11407281 CGTGGAGTCTTGAAGGTGTTCCTTGAGAACGTCATCCGTGATGCTGTCACCTACTGCGAG 11407340 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGC 16672 ||||| || | |||||||||||| ||||||| ||||||| || |||| || ||||| Sbjct 11407341 CACGCCAAGAGAAAGACTGTCACCGCCATGGACGTCGTCTACGCTCTGAAGCGCCAAGGA 11407400 Query 16673 CGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAATC 16709 | | | || || || ||| | |||| || | ||| Sbjct 11407401 AGAACTCTGTACGGATTCGGAGGATAATTTTATTATC 11407437 Score = 174 bits (192), Expect = 2e-39 Identities = 182/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | ||| || |||||||||||||| |||||||||||||| || Sbjct 11326284 GCCAAGCGCCATCGCAAAGTTCTCCGTGATAACATCCAAGGTATCACCAAGCCAGCCATT 11326225 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | | || ||||||||| | |||| |||||| |||| || || | Sbjct 11326224 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGAGAATCTCCGGATTGATCTACGAGGAAACC 11326165 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||||| | ||||| ||| ||| |||| ||||||| || ||| |||| Sbjct 11326164 CGTGGAGTCTTGAAGGTGTTCCTTGAGAACGTCATCCGTGATGCTGTCACCTACTGCGAG 11326105 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| |||||| ||||||| ||||||| || |||| || ||||| Sbjct 11326104 CACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTCTACGCTCTGAAGCGCCAAGG 11326046 Score = 174 bits (192), Expect = 2e-39 Identities = 182/239 (76%), Gaps = 0/239 (0%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| | ||| || |||||||||||||| |||||||||||||| || Sbjct 11338567 GCCAAGCGCCATCGCAAAGTTCTCCGTGATAACATCCAAGGTATCACCAAGCCAGCCATT 11338626 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | | || ||||||||| | |||| |||||| |||| || || | Sbjct 11338627 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGAGAATCTCCGGATTGATCTACGAGGAAACC 11338686 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||||| | ||||| ||| ||| |||| ||||||| || ||| |||| Sbjct 11338687 CGTGGAGTCTTGAAGGTGTTCCTTGAGAACGTCATCCGTGATGCTGTCACCTACTGCGAG 11338746 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| |||||| ||||||| ||||||| || |||| || ||||| Sbjct 11338747 CACGCCAAGAGAAAGACCGTCACCGCCATGGACGTCGTCTACGCTCTGAAGCGCCAAGG 11338805 Score = 172 bits (190), Expect = 9e-39 Identities = 185/241 (77%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | ||| || |||||||||||||| |||||||||||||| ||| Sbjct 7487947 GCCAAGCGCCATCGTAAGGTTCTCCGTGATAACATCCAAGGTATCACCAAGCCAGCCATC 7487888 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| ||| | | || ||||||||| | | ||||||||| |||| || || | Sbjct 7487887 CGTCGTCTCGCTAGAAGAGGAGGAGTCAAGAGAATTTCTGGATTGATCTACGAGGAAACC 7487828 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610 |||| || |||||| | ||||| ||| || |||| ||||||| | |||| ||| || Sbjct 7487827 CGTGGAGTCTTGAAGGTATTCCTTGAGAATGTCATCCGTGATGCTGT-CACT-TACTGCG 7487770 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| || ||| |||||||| ||||||| || |||| || |||| Sbjct 7487769 AGCACGCCAAGAGAAAGACCGTAACCGCCATGGATGTCGTCTACGCTCTGAAGCGCCAAG 7487710 Query 16671 G 16671 | Sbjct 7487709 G 7487709 Score = 156 bits (172), Expect = 7e-34 Identities = 178/239 (74%), Gaps = 0/239 (0%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||||| || || |||||||| ||||| |||||||||||||| || Sbjct 8333938 GCCAAGCGCCATCGCAAGGTGCTCCGTGATAACATTCAAGGTATCACCAAGCCAGCAATT 8333879 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | | || ||||||||| | | ||||||||| |||| || || | Sbjct 8333878 CGCCGTCTCGCCAGAAGAGGAGGAGTCAAGAGAATTTCTGGATTGATCTACGAGGAAACA 8333819 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAG 16612 |||| || |||||| | ||||| ||| ||| |||| ||||||| || ||| |||| Sbjct 8333818 CGTGGAGTCTTGAAGGTGTTCCTTGAGAACGTCATCCGTGATGCTGTCACCTACTGCGAG 8333759 Query 16613 CACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671 ||||| || | ||||| || || | ||||| |||||||||| |||| |||||||| Sbjct 8333758 CACGCCAAGAGAAAGACGGTAACTGCTATGGACGTCGTCTATGCTCTGAAGCGTCAAGG 8333700 Score = 113 bits (124), Expect = 7e-21 Identities = 112/145 (77%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 16453 TCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGG 16512 ||| || ||||||||| |||| |||||||||||||| ||||||||||| || | | || Sbjct 7333128 TCTCCGTGATAACATCAAAGGTATCACCAAGCCAGCCATCCGTCGTCTCGCAAGAAGAGG 7333187 Query 16513 TGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTT 16572 ||||||||| | ||||||||||| |||| | || | |||| || |||||||| || Sbjct 7333188 AGGAGTCAAGAGAATCTCTGGATTGATCTACGTGGAAACCCGTGGAGTCTTGAAGATGTT 7333247 Query 16573 CCTCAAGACCGTTATCCATGATGCT 16597 ||| || || |||| ||||||| Sbjct 7333248 CCTTGGGAATGTCATCCGTGATGCT 7333272 >seq2 Length=15279421 Score = 168 bits (186), Expect = 1e-37 Identities = 184/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| |||||||||||||| ||||||||||| || || Sbjct 13819892 GCCAAGCGTCATCGCAAAGTGCTTCGTGATAACATCCAAGGTATCACCAAGCCGGCAATT 13819833 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | |||||||||||| | |||||||| | |||| || || | Sbjct 13819832 CGTCGTCTCGCCAGAAGAGGTGGAGTCAAGAGAATCTCTGGACTCATCTACGAGGAAACC 13819773 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610 |||| || | ||| | ||||| ||| || |||| |||||| | ||| |||| || Sbjct 13819772 CGTGGAGTCCTCAAGGTGTTCCTTGAGAATGTGATCCGTGATGCCGT-CAC-ATACTGCG 13819715 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| ||||| |||||||| | |||||||| ||||| ||||||| Sbjct 13819714 AGCACGCCAAGAGAAAGACCGTCACTGCCATGGATGTTGTCTATGCCTTGAAGCGTCAAG 13819655 Query 16671 G 16671 | Sbjct 13819654 G 13819654 Score = 168 bits (186), Expect = 1e-37 Identities = 184/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| |||||||||||||| ||||||||||| || || Sbjct 13823330 GCCAAGCGTCATCGCAAAGTGCTTCGTGATAACATCCAAGGTATCACCAAGCCGGCAATT 13823271 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | |||||||||||| | |||||||| | |||| || || | Sbjct 13823270 CGTCGTCTCGCCAGAAGAGGTGGAGTCAAGAGAATCTCTGGACTCATCTACGAGGAAACC 13823211 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610 |||| || | ||| | ||||| ||| || |||| |||||| | ||| |||| || Sbjct 13823210 CGTGGAGTCCTCAAGGTGTTCCTTGAGAATGTGATCCGTGATGCCGT-CAC-ATACTGCG 13823153 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| ||||| |||||||| | |||||||| ||||| ||||||| Sbjct 13823152 AGCACGCCAAGAGAAAGACCGTCACTGCCATGGATGTTGTCTATGCCTTGAAGCGTCAAG 13823093 Query 16671 G 16671 | Sbjct 13823092 G 13823092 Score = 168 bits (186), Expect = 1e-37 Identities = 184/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Plus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||||||||||| | ||||| |||||||||||||| ||||||||||| || || Sbjct 13825577 GCCAAGCGTCATCGCAAAGTGCTTCGTGATAACATCCAAGGTATCACCAAGCCGGCAATT 13825636 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 |||||||| || | | |||||||||||| | |||||||| | |||| || || | Sbjct 13825637 CGTCGTCTCGCCAGAAGAGGTGGAGTCAAGAGAATCTCTGGACTCATCTACGAGGAAACC 13825696 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610 |||| || | ||| | ||||| ||| || |||| |||||| | ||| |||| || Sbjct 13825697 CGTGGAGTCCTCAAGGTGTTCCTTGAGAATGTGATCCGTGATGCCGT-CAC-ATACTGCG 13825754 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| ||||| |||||||| | |||||||| ||||| ||||||| Sbjct 13825755 AGCACGCCAAGAGAAAGACCGTCACTGCCATGGATGTTGTCTATGCCTTGAAGCGTCAAG 13825814 Query 16671 G 16671 | Sbjct 13825815 G 13825815 >seq1 Length=15072434 Score = 159 bits (176), Expect = 5e-35 Identities = 182/241 (76%), Gaps = 4/241 (2%) Strand=Plus/Minus Query 16433 GCTAAGCGTCATCGCAGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATC 16492 || ||||| ||||| | | ||||| || ||||||||||||||||| |||||||| || Sbjct 9988718 GCCAAGCGCCATCGTAAAGTCCTTCGGGACAACATCCAAGGAATCACGAAGCCAGCCATT 9988659 Query 16493 CGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATT 16552 || ||||| || | | || |||||||| ||| ||||||||||| |||| ||||| | | Sbjct 9988658 CGCCGTCTAGCAAGAAGAGGAGGAGTCAAACGTATCTCTGGATTGATCTACGAAGAAACT 9988599 Query 16553 CGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATAC--CG 16610 |||| ||| | ||| | ||||| ||| |||||||| || || | |||| ||| || Sbjct 9988598 CGTGGAGTTCTCAAGGTGTTCCTTGAGAACGTTATCCGAGACGCCGT-CACT-TACTGCG 9988541 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| || | ||||| ||||| ||||||| | |||||||| |||| | |||| Sbjct 9988540 AGCACGCCAAGAGGAAGACCGTCACAGCCATGGACGTTGTCTATGCTCTGAAGAGACAAG 9988481 Query 16671 G 16671 | Sbjct 9988480 G 9988480 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075193599851