Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq2 134 3e-26 seq3 116 8e-21 seq1 100 6e-16 seq6 98.7 2e-15 seq4 98.7 2e-15 seq5 93.3 9e-14 >seq2 Length=15279421 Score = 134 bits (148), Expect = 3e-26 Identities = 344/515 (67%), Gaps = 18/515 (3%) Strand=Plus/Plus Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 |||||||| ||||| || | |||||||| |||||||| ||||| ||| | ||||| Sbjct 11877890 GAGCGTTCAATTCCATGCCTTGTGGATGGTTTCAAGCCAGGACAGCGGAAGGTTCTCTTC 11877949 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAG----AAATTAAGGTCGCTCAGTTTTCTGGTTA 218678 || |||||| | | | | |||| || | || || ||||| || |||| Sbjct 11877950 GCGTGCTTCAAGAG--AGCAGA--CAAGCGTGAAGTCAAAGTAGCTCAATTGGCTGGAGC 11878005 Query 218679 TGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGG 218738 ||| | |||||||||| ||||||||||| || ||| || ||| | ||||| Sbjct 11878006 TGTCGCTGAAATTTCTGCTTACCATCACGGAGAACAGTCGCTTATGGGAACAATTGTGAA 11878065 Query 218739 CATGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTT 218798 | || || || || || ||| |||||||| ||| |||| || || | ||| ||||| Sbjct 11878066 TCTCGCTCAAGATTACGTTGGCTCCAACAACATCAACCTGCTTCTTCCAATCGGACAGTT 11878125 Query 218799 TGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTT 218858 |||| ||||||| ||||||||||| |||||||| || | || ||||| || | | Sbjct 11878126 TGGTACTCGTCTCCAAGGTGGAAAGGACAGTGCTTCAGCTCGTTACATCTTCACTCAACT 11878185 Query 218859 GTCGCCCGTGACGCGCCAGGTGTTCAATCAGGC---CGATGATGTGCTCCTTAAGTATCT 218915 |||||| || || || | ||| | ||| |||||| ||||| | || Sbjct 11878186 GTCGCCAGTCACTCGTACACTCTTC---CCGGCTCACGATGACAATGTCCTTCGTTTCCT 11878242 Query 218916 TGAGGACGATGGTTCTTCG-ATTGAGCCCGAGTGGTATGTGCCTG-CTATTCCGTTTTTG 218973 | | || || || || |||||||| || |||||| |||| | |||||| | | Sbjct 11878243 TTATGAAGA-AAATCAGCGTATTGAGCCAGAATGGTAT-TGCCCGATTATTCCAATGGTA 11878300 Query 218974 CTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAAT 219033 ||||| ||||| || | || ||||| || || | || |||||||| ||||||| Sbjct 11878301 CTCGTCAATGGAGCTCAAGGCATCGGTACTGGATGGTCCACGAACATTCCTAATTACAAT 11878360 Query 219034 CCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 || || | | | ||| |||||||||| || Sbjct 11878361 CCACGTGAACTGGTCAAGAACATCAAGCGTCTTAT 11878395 Score = 100 bits (110), Expect = 6e-16 Identities = 69/78 (88%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 3439466 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 3439407 Query 142564 CCCACATCGGGCAGAAGT 142581 ||| ||| |||| || || Sbjct 3439406 CCCGCATTGGGCTGATGT 3439389 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 3519322 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 3519263 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 3519262 CCCGCATTGGGC 3519251 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 3567836 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 3567777 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 3567776 CCCGCATTGGGC 3567765 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 11157874 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 11157815 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 11157814 CCCGCATTGGGC 11157803 Score = 89.7 bits (98), Expect = 1e-12 Identities = 186/275 (68%), Gaps = 4/275 (1%) Strand=Plus/Plus Query 218565 GCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGC 218624 || ||| ||||| | | |||||||| | || ||| ||||| ||| | ||||| || Sbjct 7039454 GCATTCAATTCCATGTCTTGTGGATGGTTTGAAACCAGGACAGCGGAAGGTTCTCTTCGC 7039513 Query 218625 CGCATTCAA--GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTA 218682 ||||| | | || | | | ||| | || || ||||| | |||| ||| Sbjct 7039514 GTGCTTCAAAAGAGCAAACAAG--CGTGAAGTCAAAGTAGCTCAACTGGCTGGAGCTGTC 7039571 Query 218683 TCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCATG 218742 | |||||||||| ||||||||||| || ||| || ||| | ||||| | Sbjct 7039572 GCTGAAATTTCTGCTTACCATCACGGAGAACAGTCGCTTATGGGAACAATTGTGAATCTC 7039631 Query 218743 GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTGGT 218802 || || || || || ||| ||||||| ||| |||| || || | ||| ||||||||| Sbjct 7039632 GCTCAAGATTACGTTGGCTCCCACAACATCAACCTGCTTCTTCCTATCGGGCAGTTTGGT 7039691 Query 218803 TCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGC 218837 ||||||| ||||||||||| |||||||| || Sbjct 7039692 ACTCGTCTCCAAGGTGGAAAGGACAGTGCTTCAGC 7039726 >seq3 Length=13783801 Score = 116 bits (128), Expect = 8e-21 Identities = 175/247 (71%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 251526 CATCACACCTGGACGTTGATATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTC 251585 |||||| || ||||||||||| || || || || |||||||| |||| ||| || || Sbjct 4093560 CATCACTCCAGGACGTTGATACTCGGAAACCCGCTTCTCGAAGAAGTTAGTCTTTCCGTC 4093619 Query 251586 CAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCC 251645 | ||||| ||||||||||||||| || || | | ||||| ||||| | || Sbjct 4093620 GATCGAGATATTCTCCATGAAGTCGAATGGATTCTTCGACTTGTAAAGCTTGTCACAACC 4093679 Query 251646 AAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTT 251705 || | |||| | | || || |||||||| | |||||| ||| || | |||| Sbjct 4093680 GAGCTCGACGAGCAAATGATCGGCGACAAACTCGATGTACTGTGACATAAGACGACAGTT 4093739 Query 251706 CATGCCAATCATACGACAA--GGAATTGCCTCACAGATGAATTCCTTTTCGTTGGCAACT 251763 |||||||||||| | ||| |||| ||||||| | |||||| | |||| |||| || Sbjct 4093740 CATGCCAATCAT--GTCAACTGGAAGTGCCTCAGTCAGGAATTCTTGTTCGATGGCCACA 4093797 Query 251764 GCCTCCT 251770 || |||| Sbjct 4093798 GCGTCCT 4093804 Score = 104 bits (114), Expect = 5e-17 Identities = 212/313 (68%), Gaps = 4/313 (1%) Strand=Plus/Minus Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 || || || ||||| || | |||||||| ||| |||| ||||| ||| | |||||| Sbjct 10144232 GAACGATCAATTCCATGCCTTGTGGATGGTTTCAGGCCAGGACAGCGGAAGGTTCTCTTT 10144173 Query 218623 GCCGCATTCAA--GCGGAACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATG 218680 || ||||| | | | | | || || | || || ||||| || |||| || Sbjct 10144172 GCGTGCTTCAAAAGAGCAGACAAG--CATGAGGTCAACGTAGCTCAATTGGCTGGAGCTG 10144115 Query 218681 TATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGGCA 218740 | | || ||||||| ||||||||||| || ||| || ||| | ||||| Sbjct 10144114 TCGCTGATATTTCTGCGTACCATCACGGAGAACAGTCGCTTATGGGAACAATTGTGAATC 10144055 Query 218741 TGGCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAGTTTG 218800 | || || || || || || |||||||| ||| |||| || || | ||| || || | Sbjct 10144054 TCGCTCAAGATTACGTTGGATCCAACAACATCAACCTGCTTCTTCCAATCGGACAATTCG 10143995 Query 218801 GTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAGTTGT 218860 || ||||||| |||||||||||| |||||||| || | || ||||| || | ||| Sbjct 10143994 GTACTCGTCTCCAGGGTGGAAAGGACAGTGCTTCAGCTCGTTACATCTTCACTCAACTGT 10143935 Query 218861 CGCCCGTGACGCG 218873 |||| || || || Sbjct 10143934 CGCCAGTCACTCG 10143922 Score = 102 bits (112), Expect = 2e-16 Identities = 70/79 (89%), Gaps = 0/79 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 3426985 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 3426926 Query 142564 CCCACATCGGGCAGAAGTC 142582 ||| ||| |||| || ||| Sbjct 3426925 CCCGCATTGGGCTGATGTC 3426907 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 3389537 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 3389596 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 3389597 CCCGCATTGGGC 3389608 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 8473473 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 8473532 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 8473533 CCCGCATTGGGC 8473544 >seq1 Length=15072434 Score = 100 bits (110), Expect = 6e-16 Identities = 73/84 (87%), Gaps = 3/84 (4%) Strand=Plus/Minus Query 142495 GGTGAGATAG---CCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTC 142551 |||||||| | |||||||||||||||||||||||| | ||||||||||||| || ||| Sbjct 13297757 GGTGAGATTGGCGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTC 13297698 Query 142552 GTGGGTTCGAGCCCCACATCGGGC 142575 | ||||||||||||| ||| |||| Sbjct 13297697 GCGGGTTCGAGCCCCGCATTGGGC 13297674 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 6136597 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 6136656 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 6136657 CCCGCATTGGGC 6136668 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 11579778 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 11579719 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 11579718 CCCGCATTGGGC 11579707 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 11584194 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 11584135 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 11584134 CCCGCATTGGGC 11584123 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 11584787 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 11584846 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 11584847 CCCGCATTGGGC 11584858 Score = 95.1 bits (104), Expect = 2e-14 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||| ||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 7279427 GCCCGGTTAGCTCAGCCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 7279368 Query 142564 CCCACATCGGGCAGA 142578 ||| ||| |||| || Sbjct 7279367 CCCGCATTGGGCTGA 7279353 >seq6 Length=17718942 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 12106219 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 12106160 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 12106159 CCCGCATTGGGC 12106148 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13655989 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13655930 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13655929 CCCGCATTGGGC 13655918 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13714888 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13714947 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13714948 CCCGCATTGGGC 13714959 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13717195 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13717254 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13717255 CCCGCATTGGGC 13717266 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13730357 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13730416 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13730417 CCCGCATTGGGC 13730428 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13730778 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13730837 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13730838 CCCGCATTGGGC 13730849 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13781640 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13781699 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13781700 CCCGCATTGGGC 13781711 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 13782249 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 13782308 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13782309 CCCGCATTGGGC 13782320 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 14478949 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 14478890 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 14478889 CCCGCATTGGGC 14478878 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 15241427 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 15241368 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 15241367 CCCGCATTGGGC 15241356 Score = 95.1 bits (104), Expect = 2e-14 Identities = 64/72 (89%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || ||| |||||||||| Sbjct 13729905 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTCTCGCGGGTTCGAGC 13729964 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13729965 CCCGCATTGGGC 13729976 Score = 89.7 bits (98), Expect = 1e-12 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||| ||||||||||||||||||||| | ||||||||||||| || |||| || ||||||| Sbjct 13716493 GCCTGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGTTTCGAGC 13716552 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 13716553 CCCGCATTGGGC 13716564 Score = 86.0 bits (94), Expect = 1e-11 Identities = 58/65 (89%), Gaps = 0/65 (0%) Strand=Plus/Minus Query 142511 TAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGCCCCACAT 142570 |||||||||||||||||| | ||||||||||||| || |||| ||||||||||||| ||| Sbjct 14486276 TAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGCCCCGCAT 14486217 Query 142571 CGGGC 142575 |||| Sbjct 14486216 TGGGC 14486212 >seq4 Length=17493829 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 5967160 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 5967219 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 5967220 CCCGCATTGGGC 5967231 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 12594740 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 12594799 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 12594800 CCCGCATTGGGC 12594811 Score = 98.7 bits (108), Expect = 2e-15 Identities = 65/72 (90%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 ||||||||||||||||||||||||| | ||||||||||||| || |||| |||||||||| Sbjct 15793415 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 15793474 Query 142564 CCCACATCGGGC 142575 ||| ||| |||| Sbjct 15793475 CCCGCATTGGGC 15793486 >seq5 Length=20924180 Score = 93.3 bits (102), Expect = 9e-14 Identities = 336/516 (65%), Gaps = 21/516 (4%) Strand=Plus/Plus Query 218563 GAGCGTTCTATTCCCAGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTT 218622 |||||||| ||||| | | |||||||| |||||||| || || ||| | ||||| Sbjct 1687729 GAGCGTTCAATTCCATGTCTTGTGGATGGTTTCAAGCCAGGACAACGGAAGGTTCTCTTC 1687788 Query 218623 GCCGCATTCAAGCGGAACCTGGTTCAAGAAA----TTAAGGTCGCTCAGTTTTCTGGTTA 218678 || |||||| | | | | |||| | | || || ||||| || | || Sbjct 1687789 GCGTGCTTCAAGAG--ATCAGA--CAAGCATGGGGTCAAAGTGGCTCAATTGGCCGGAGG 1687844 Query 218679 TGTATCCGAAATTTCTGGCTACCATCACGGTGAGCAGAGTCTGCAGGGTGCCATTGTAGG 218738 ||| | || || |||| ||||||||||| || ||| || | | ||||| | Sbjct 1687845 TGTCGCTGATATGTCTGCTTACCATCACGGAGAACAGTCGCTTATGACAACAATTGT--G 1687902 Query 218739 CATG--GCACAGGACTATGTGGGCAGTAACAACATGAACTTGCTGCTCCCCAACGGTCAG 218796 ||| || ||||| || || || |||||||| |||| ||| || || | ||| | Sbjct 1687903 CATCTCGCCCAGGATTACGTTGGATCCAACAACATCAACT-GCTTCTTCCAATCGGAATG 1687961 Query 218797 TTTGGTTCTCGTCTATTGGGTGGAAAGGATAGTGCTTCTGCCAGGTATATCTTTACAAAG 218856 || ||| ||||||| |||||||||||| |||||||| || ||| |||||||| | Sbjct 1687962 TTCGGTACTCGTCTTCAGGGTGGAAAGGACAGTGCTTCAGCTCAGTACATCTTTACTCAA 1688021 Query 218857 TTGTCGCCCGTGACGCGCCAGGTGTTC---AATCAGGCCGATGATGTGCTCCTTAAGTAT 218913 ||||||| || || || | ||| ||| | ||| |||| || | | | | Sbjct 1688022 CTGTCGCCAGTCACTCGTACACTCTTCCCGTCTCACGATGATAATGTTCTGCGT---TTT 1688078 Query 218914 CTTGAGGACGATGGTTCTTCG-ATTGAGCCCGAGTGGTATGTGCCTGCTATTCCGTTTTT 218972 ||| | || || || || |||||||| ||||||||| || || ||| | | Sbjct 1688079 CTTTATGAAGA-AAATCAGCGAATTGAGCCAGAGTGGTATTGTCCAATTAGTCCAATGGT 1688137 Query 218973 GCTCGTAAATGGTGCCAATGGTATCGGGACAGGGTTCAGTACTGACATTCCTTCTTACAA 219032 ||||| ||||| || | || |||| ||||| | | || |||| ||| |||||| Sbjct 1688138 TCTCGTCAATGGAGCTCAAGGGATCGATACAGGATGGCGCACGAACATCCCTAATTACAA 1688197 Query 219033 TCCCAAGGACATCATTGACAACGTCAAGCGTCTCAT 219068 ||| || | | | ||| |||||||||| || Sbjct 1688198 TCCACGTGAACTGGTCAAGAACATCAAGCGTCTTAT 1688233 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836707815887