Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq3 179 7e-40 seq1 120 6e-22 seq2 100 5e-16 seq5 91.5 3e-13 seq6 89.7 9e-13 seq4 87.8 3e-12 >seq3 Length=13783801 Score = 179 bits (198), Expect = 7e-40 Identities = 176/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | ||||| || || || ||||| ||||||||||| || |||||| Sbjct 5943192 CCTCCTCTCAGACGGAGAACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAGTCGGAG 5943133 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | || ||||| | || || |||||||| |||||||| || || || ||||| Sbjct 5943132 AGGGTACGACCGTCTTCGAGTTGTTTTCCGGCGAAGATGAGTCTCTGCTGATCTGGTGGG 5943073 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || |||||||||||||||||||| ||||| || ||||||||| || | | ||| ||| Sbjct 5943072 ATTCCTTCCTTGTCTTGAATCTTGGCCTTCACATTCTCGATGGTATCAGAGGCTTCGACT 5943013 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||||| ||||| || | ||||||||||| |||||||| Sbjct 5943012 TCAAGTGTGATGGTCTTTCCAGTCAATGTCTTGACGAAGATCTGCAT 5942966 Score = 163 bits (180), Expect = 5e-35 Identities = 174/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || || | ||||| || || || ||||| ||||||||||| ||||||| Sbjct 5942234 TTCCTCCTCGGAGACGGAGAACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCGG 5942175 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 |||| || | ||||| || | ||||| ||||| || || | | ||||| || |||| Sbjct 5942174 AGAGAGTACGGCCATCCTCGAGTTGCTTTCCGGCAAAGATCAAACGCTGTTGATCTGGTG 5942115 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || |||||||||||||| ||||| ||||| ||| ||| || ||||| | | ||| | Sbjct 5942114 GGATACCTTCCTTGTCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCAGAAGCTTCAA 5942055 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 | || | || || || ||||| || | ||||||||||| ||||||||| Sbjct 5942054 CCTCAAGAGTAATAGTCTTTCCGGTCAAAGTCTTGACGAAGATCTGCATT 5942005 Score = 163 bits (180), Expect = 5e-35 Identities = 162/210 (77%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || || || |||||||| || || || || || | || ||||| Sbjct 5942442 ACCAAATGAAGAGTTGATTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCTTCG 5942383 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| || ||||| ||||| | ||| || || || ||||| ||||||||||| ||| Sbjct 5942382 AGCTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGAGGAATTCCTTCCTTGTCCTGA 5942323 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| ||||| ||| ||||||||| || | | ||| ||||| | ||||||||| ||| Sbjct 5942322 ATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGCTTCGACTTCGAGGGTGATGGTCTTT 5942263 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | || ||||||||||| || |||||| Sbjct 5942262 CCGATAAGAGTCTTGACGAAGATTTGCATT 5942233 Score = 158 bits (174), Expect = 2e-33 Identities = 174/232 (75%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | ||| || | |||||||| || || || || || |||||||| || || | Sbjct 5941219 TTCCTCCTCTAAGACGAAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAG 5941160 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 | || || | || || || | |||||| |||||||| ||||| | || || || |||| Sbjct 5941159 ACAGGGTGCGGCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGTG 5941100 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||| |||||||||||||| ||||| || ||||| |||||||| || | | || | Sbjct 5941099 GAATTCCTTCCTTGTCTTGGATCTTGGCTTTGACATTTTCGATGGTATCGGAAGCCTCCA 5941040 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTAT 68464 | |||| |||||| |||||||| || | || |||||||| || ||||| || Sbjct 5941039 CCTCCAGGGTGATAGTTTTTCCAGTCAACGTTTTGACGAAGATTTGCATGAT 5940988 Score = 156 bits (172), Expect = 8e-33 Identities = 160/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 68253 ACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATCTTCT 68312 ||||| || || || || || || |||||||| || || || || || | || || || Sbjct 5941705 ACCAAATGAAGAGTTGATTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCCTCG 5941646 Query 68313 AACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGA 68372 | |||||| |||||||| || |||||||| || || ||||| || ||||| || |||||| Sbjct 5941645 AGCTGCTTTCCGGCGAAGATAAGTCTTTGCTGATCTGGTGGGATTCCTTCTTTATCTTGA 5941586 Query 68373 ATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTT 68432 ||||| |||||||| ||||| ||||| | | ||| ||||| | |||||||| ||| Sbjct 5941585 ATCTTAGCCTTGACATTTTCGATCGTGTCGGAAGCTTCGACTTCAAGTGTGATGGTCTTT 5941526 Query 68433 CCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || | ||||||||||| |||||||| Sbjct 5941525 CCAGTCAATGTCTTGACGAAGATCTGCAT 5941497 Score = 150 bits (166), Expect = 3e-31 Identities = 178/240 (74%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 68224 GATTTTAATTTC--CTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGAT 68281 ||||| ||| || |||||||||| || | || | || || || ||||| |||||||| Sbjct 5943711 GATTTAAATGTCTCCTCCGCGAAGACGAAGAACGAGATGAAGTGTCGACTCCTTTTGGAT 5943652 Query 68282 GTTATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTG 68341 ||| |||||||| || || | ||||| || | |||||| || || || || | | ||| Sbjct 5943651 GTTGTAATCGGATAGAGTGCGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTG 5943592 Query 68342 TTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTC 68401 || || ||||| || || ||||| || || || || || ||||| ||| |||||||| Sbjct 5943591 CTGATCTGGTGGGATTCCCTCCTTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTC 5943532 Query 68402 TGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 | | ||| || || | |||||||||||||| || | ||||||||||| |||||||| Sbjct 5943531 CGAAGCTTCGACCTCGAGAGTGATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTGCAT 5943472 Score = 141 bits (156), Expect = 2e-28 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 ||||| | || || | ||||| || || || || || || ||||| || || || || Sbjct 5942964 CCTCCTCTGAGACGGAGCACCAAATGGAGGGTTGATTCCTTCTGGATATTGTAGTCCGAA 5942905 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | ||||| || | ||||| |||||||| || | | ||| || || ||||| Sbjct 5942904 AGGGTACGGCCATCCTCGAGTTGCTTTCCGGCGAAGATCAAGCGTTGCTGATCTGGTGGG 5942845 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||| ||||| ||||| ||| ||| || ||||| | | ||| || Sbjct 5942844 ATACCTTCTTTGTCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCAGAAGCTTCCACC 5942785 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 || | |||||||| ||||| || || ||||||||||| ||||||||| Sbjct 5942784 TCGAGCGTGATGGTCTTTCCTGTAAGAGTCTTGACGAAGATCTGCATT 5942737 Score = 131 bits (144), Expect = 3e-25 Identities = 113/140 (81%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || ||||| || ||||| || || || |||||||| |||||||||||||| ||||| ||| Sbjct 5943333 CCAGCGAAAATAAGTCTCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCC 5943274 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||||| ||||||||||| | | ||| ||||| | ||||||||| ||||| || | Sbjct 5943273 TTGACATTTTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCGGTCAAT 5943214 Query 68442 GTCTTGACGAATATCTGCAT 68461 ||||||||||| |||||||| Sbjct 5943213 GTCTTGACGAAGATCTGCAT 5943194 Score = 127 bits (140), Expect = 4e-24 Identities = 112/140 (80%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || ||||| || || || |||||||| |||||||||||||| ||||| ||| Sbjct 5941864 CCAGCAAAAATAAGTCTCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCC 5941805 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||||| ||||||||||| | | ||| ||||| | ||||||||| ||||| || | Sbjct 5941804 TTGACATTTTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCGGTCAAT 5941745 Query 68442 GTCTTGACGAATATCTGCAT 68461 ||||||||||| |||||||| Sbjct 5941744 GTCTTGACGAAGATCTGCAT 5941725 Score = 111 bits (122), Expect = 3e-19 Identities = 109/141 (77%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 || || || || || | || || || ||||| || || ||||||||||||||||| ||| Sbjct 5941358 CCAGCAAAGATAAGACGCTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGAATCTTGGCC 5941299 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 |||||| |||||| ||||| | | ||| ||||| | |||||||| ||||| || | Sbjct 5941298 TTGACGTTCTCGATCGTGTCGGAAGCTTCAACTTCAAGTGTGATGGTCTTTCCAGTCAAA 5941239 Query 68442 GTCTTGACGAATATCTGCATT 68462 |||||||| || ||||||||| Sbjct 5941238 GTCTTGACAAAGATCTGCATT 5941218 Score = 111 bits (122), Expect = 3e-19 Identities = 117/153 (76%), Gaps = 1/153 (1%) Strand=Plus/Plus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 |||||||| || | |||||| || || ||||| || || ||||||||||| ||||| ||| Sbjct 12978382 CCGGCGAAGATCAATCTTTGCTGATCTGGTGGGATTCCCTCCTTGTCTTGGATCTTGGCC 12978441 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 ||||| ||| ||||| || | | || ||||| | ||| || || || ||||| || Sbjct 12978442 TTGACATTCTCAATGGTATCGGAAGCCTCGACTTCGAGGGTAATAGTCTTACCCGTCAGA 12978501 Query 68442 GTCTTGACGAATATCTGCATTA-TGCTATTATA 68473 ||||||||||| || ||||| | || |||||| Sbjct 12978502 GTCTTGACGAAGATTTGCATGACTGAAATTATA 12978534 Score = 107 bits (118), Expect = 4e-18 Identities = 97/122 (80%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 176229 GGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGG 176288 || |||||||| |||||||| || | ||| || ||||||||||| || || || || || Sbjct 10143931 GGCGACAGTTGAGTGAAGATGTAACGAGCTGAAGCACTGTCCTTTCCACCCTGGAGACGA 10143990 Query 176289 GAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGG 176348 | ||||||||||||| |||||||||| |||||||| || || || ||||| ||||| Sbjct 10143991 GTACCGAATTGTCCGATTGGAAGAAGCAGGTTGATGTTGTTGGATCCAACGTAATCTTGA 10144050 Query 176349 GC 176350 || Sbjct 10144051 GC 10144052 Score = 95.1 bits (104), Expect = 2e-14 Identities = 105/140 (75%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 68322 CCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCC 68381 ||||| || || || | || || || ||||| || |||||||||||||| ||||| ||| Sbjct 5942601 CCGGCAAAGATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCC 5942542 Query 68382 TTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGG 68441 || || |||||||| || | | ||| ||||| | |||||| || ||||| || | Sbjct 5942541 TTCACATTTTCGATGGTATCAGAGGCTTCGACTTCGAGGGTGATAGTCTTTCCAGTCAAA 5942482 Query 68442 GTCTTGACGAATATCTGCAT 68461 ||||| ||||| || ||||| Sbjct 5942481 GTCTTCACGAAGATTTGCAT 5942462 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 3389536 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 3389595 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 3389596 CCCCGCATTGGGC 3389608 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 3426986 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 3426927 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 3426926 CCCCGCATTGGGC 3426914 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 8473472 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 8473531 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 8473532 CCCCGCATTGGGC 8473544 >seq1 Length=15072434 Score = 120 bits (132), Expect = 6e-22 Identities = 211/305 (69%), Gaps = 12/305 (4%) Strand=Plus/Plus Query 268403 GGGCTCTCGTGGTTGAAGAGGATGCCGTTGCACGCGAACATGCCATATGCCTCACGGTAG 268462 || ||||| |||||||| || || || || || || ||||| ||| ||||| || ||| Sbjct 12293015 GGACTCTCATGGTTGAACAGAATTCCATTACAAGCAAACATCTTATACGCCTCCCGATAG 12293074 Query 268463 TTCACGACCGTCCAGTATGCAAACATCTTTGCAACTGCGTACGGAGAACGTGGATGGAAG 268522 ||||| || |||| || || ||||||| || || || || || || | || | ||| Sbjct 12293075 TTCACCACAATCCAATAGCCATACATCTTGGCGACCGCATAAGGGGATCTCGGGTAGAAT 12293134 Query 268523 GGCGTCGTGATCT-TTTGAGGGATTTCTCGGACTTTGCCAAAGAGCTCGGAGGTCGATGC 268581 || ||| | || |||| ||||||||| | ||||| || ||||||| || || || || Sbjct 12293135 GGGGTCA-GCTCGCTTTGTGGGATTTCTTGAACTTTTCCGTAGAGCTCCGAAGTTGAAGC 12293193 Query 268582 TTGGTA-----GAACTTTGTTGTTTTTTCGAGACCGCAGATTCGGATTGCCTCGAGCAAA 268636 |||||| ||||||| | | || |||| || | || || || || | | Sbjct 12293194 TTGGTAGAATCGAACTTTCTCGGTT-----AGACGACAAGCGTGAATGGCGTCAAGAAGA 12293248 Query 268637 CGAAGAGTTCCCATGCCATCCACGTCCGCTGTATACTCCGGCATCTCGAATGACACCTGG 268696 ||||| ||||| | |||| || || || || |||||||| | || || || || | | Sbjct 12293249 CGAAGGGTTCCTACTGCATCGACTTCAGCGGTGTACTCCGGGAGGTCAAAGGAGACTTTG 12293308 Query 268697 ACATG 268701 ||||| Sbjct 12293309 ACATG 12293313 Score = 89.7 bits (98), Expect = 9e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 84454 GCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 84513 ||||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||| Sbjct 13297747 GCGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGA 13297688 Query 84514 GCCCCACATCGGGC 84527 ||||| ||| |||| Sbjct 13297687 GCCCCGCATTGGGC 13297674 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 6136596 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 6136655 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 6136656 CCCCGCATTGGGC 6136668 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 11579779 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 11579720 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 11579719 CCCCGCATTGGGC 11579707 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 11584195 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 11584136 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 11584135 CCCCGCATTGGGC 11584123 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 11584786 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 11584845 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 11584846 CCCCGCATTGGGC 11584858 >seq2 Length=15279421 Score = 100 bits (110), Expect = 5e-16 Identities = 208/306 (68%), Gaps = 8/306 (3%) Strand=Plus/Minus Query 176229 GGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGG 176288 || |||||||| |||||||| || | ||| || ||||||||||| || || || || || Sbjct 11878191 GGCGACAGTTGAGTGAAGATGTAACGAGCTGAAGCACTGTCCTTTCCACCTTGGAGACGA 11878132 Query 176289 GAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGG 176348 | ||| || |||||| |||||||||| |||||||| || || || ||||| ||||| Sbjct 11878131 GTACCAAACTGTCCGATTGGAAGAAGCAGGTTGATGTTGTTGGAGCCAACGTAATCTTGA 11878072 Query 176349 GC--CATTCCGACTATGGCGCCCTGGAGAGACGCCTCGCCGTGGTGATAGCCGGCGTTCT 176406 || |||| || || | ||| || ||| || ||||| || || | | | | Sbjct 11878071 GCGAGATTC--ACAATTGTTCCCATAAGCGACTGTTCTCCGTGATGGTAAGCAGAAATTT 11878014 Query 176407 CACTTGTGTATCCGGCAAACTGCGCGACTTTGATTTCTTGTACGAGGTTG--CGCTTCAA 176464 || ||| || || || || ||||||| ||| | | | || | ||| || Sbjct 11878013 CAGCGACAGCTCCAGCCAATTGAGCTACTTTGACTTCACG--CTTGTCTGCTCTCTTGAA 11877956 Query 176465 CGCCGAGAACAGAATCTTCCGCTGCGAGGGCTTCAGACCATCGACGACCGACGGAATGGA 176524 || ||| |||| ||||||||| ||||| | |||||| || | | ||||| || Sbjct 11877955 GCACGCGAAGAGAACCTTCCGCTGTCCTGGCTTGAAACCATCCACAAGGCATGGAATTGA 11877896 Query 176525 ACGCTC 176530 |||||| Sbjct 11877895 ACGCTC 11877890 Score = 89.7 bits (98), Expect = 9e-13 Identities = 75/92 (82%), Gaps = 0/92 (0%) Strand=Plus/Minus Query 84436 CAAATCTGGGTGACGAGAGCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACC 84495 |||| || ||| ||| |||||||||||||||||||| ||||| | || ||||||| | Sbjct 3519342 CAAAACTAGGTTACGTCGCCGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATC 3519283 Query 84496 TTGTGGTCGTGGGTTCGAGCCCCACATCGGGC 84527 | || |||| ||||||||||||| ||| |||| Sbjct 3519282 TGGTTGTCGCGGGTTCGAGCCCCGCATTGGGC 3519251 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 3567837 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 3567778 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 3567777 CCCCGCATTGGGC 3567765 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||||| Sbjct 3439466 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 3439407 Query 84516 CCCACATCGGGC 84527 ||| ||| |||| Sbjct 3439406 CCCGCATTGGGC 3439395 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||||| Sbjct 11157874 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 11157815 Query 84516 CCCACATCGGGC 84527 ||| ||| |||| Sbjct 11157814 CCCGCATTGGGC 11157803 Score = 84.2 bits (92), Expect = 4e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 176232 GACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGGGAA 176291 |||||||| | |||||| | | ||| || ||||||||||| || || || || || | | Sbjct 7039750 GACAGTTGAGCGAAGATGGAACGAGCTGAAGCACTGTCCTTTCCACCTTGGAGACGAGTA 7039691 Query 176292 CCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGGGC 176350 || || || ||| ||||||||||| |||||||| | || || ||||| ||||| || Sbjct 7039690 CCAAACTGCCCGATAGGAAGAAGCAGGTTGATGTTGTGGGAGCCAACGTAATCTTGAGC 7039632 >seq5 Length=20924180 Score = 91.5 bits (100), Expect = 3e-13 Identities = 94/122 (77%), Gaps = 1/122 (1%) Strand=Plus/Minus Query 176229 GGGGACAGTTGTGTGAAGATATACCTAGCAGACGCACTGTCCTTGCCTCCGTGAAGGCGG 176288 || |||||||| || ||||| ||| ||| || ||||||||||| || || ||||| || Sbjct 1688029 GGCGACAGTTGAGTAAAGATGTACTGAGCTGAAGCACTGTCCTTTCCACCCTGAAGACGA 1687970 Query 176289 GAACCGAATTGTCCGCGAGGAAGAAGCAAATTGATGTTATTCGAACCCACGTAGTCTTGG 176348 | |||||| |||| ||||||||| | |||||||| || || || ||||| || ||| Sbjct 1687969 GTACCGAACATTCCGATTGGAAGAAGC-AGTTGATGTTGTTGGATCCAACGTAATCCTGG 1687911 Query 176349 GC 176350 || Sbjct 1687910 GC 1687909 >seq6 Length=17718942 Score = 89.7 bits (98), Expect = 9e-13 Identities = 64/74 (86%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 84454 GCGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGA 84513 ||||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||| Sbjct 13717193 GCGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGA 13717252 Query 84514 GCCCCACATCGGGC 84527 ||||| ||| |||| Sbjct 13717253 GCCCCGCATTGGGC 13717266 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12106220 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12106161 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12106160 CCCCGCATTGGGC 12106148 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Minus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13655990 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13655931 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13655930 CCCCGCATTGGGC 13655918 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13714887 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13714946 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13714947 CCCCGCATTGGGC 13714959 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13730356 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13730415 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13730416 CCCCGCATTGGGC 13730428 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13730777 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13730836 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13730837 CCCCGCATTGGGC 13730849 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13781639 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13781698 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13781699 CCCCGCATTGGGC 13781711 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 13782248 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 13782307 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 13782308 CCCCGCATTGGGC 13782320 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||||| Sbjct 14478949 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 14478890 Query 84516 CCCACATCGGGC 84527 ||| ||| |||| Sbjct 14478889 CCCGCATTGGGC 14478878 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 84456 GCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGC 84515 ||||||||||||||||||| ||||| | || ||||||| || || |||| |||||||||| Sbjct 15241427 GCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAGC 15241368 Query 84516 CCCACATCGGGC 84527 ||| ||| |||| Sbjct 15241367 CCCGCATTGGGC 15241356 >seq4 Length=17493829 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 5967159 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 5967218 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 5967219 CCCCGCATTGGGC 5967231 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 12594739 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 12594798 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 12594799 CCCCGCATTGGGC 12594811 Score = 87.8 bits (96), Expect = 3e-12 Identities = 63/73 (86%), Gaps = 0/73 (0%) Strand=Plus/Plus Query 84455 CGCCCGGTTAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAG 84514 |||||||||||||||||||| ||||| | || ||||||| || || |||| ||||||||| Sbjct 15793414 CGCCCGGTTAGCTCAGTCGGTAGAGCACCAGACTCTTAATCTGGTTGTCGCGGGTTCGAG 15793473 Query 84515 CCCCACATCGGGC 84527 |||| ||| |||| Sbjct 15793474 CCCCGCATTGGGC 15793486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622319358040