Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2 325 2e-83 seq1 172 2e-37 seq3 105 3e-17 >seq2 Length=15279421 Score = 325 bits (360), Expect = 2e-83 Identities = 878/1321 (66%), Gaps = 54/1321 (4%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| ||||| || || | ||||| || || ||||| |||||||| || ||| | Sbjct 11758805 TCCAGAAGAGATCTCTGCAATGGTACTCCAAAAGATGAAGGAAACAGCTGAGACTTATCT 11758746 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | | || | |||||||| || || ||||| || || ||||||||| || | Sbjct 11758745 CGGACATACCGTGAAAGATGCAGTTATCACAGTTCCTGCATACTTCAATGATAGTCAGAG 11758686 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 ||||||||| || ||||||| |||||||| | |||| |||||||||| ||||| Sbjct 11758685 GCAAGCAACAAAGGATGCAGCTACCATTGCTGGACTCAATGCAATTCGAATTATCAATGA 11758626 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaa 451482 ||| || || |||||||| ||||||||| | | ||| || || || || || || Sbjct 11758625 ACCAACTGCTGCTGCTCTTGCATATGGATTGGATAAAGGAATTCAA---GATGAGAAGAA 11758569 Query 451483 TATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGA 451542 | | || | || ||| | || ||||| || |||| ||| | |||||||||| || Sbjct 11758568 TGTATTGATCTTCGATCTCGGAGGAGGTACATTTGATGTTTCAATTCTTTCAATTGCTGA 11758509 Query 451543 TGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATAT 451599 || | |||| ||||| || |||| ||||||||| ||||| ||||| ||||| | Sbjct 11758508 AGGATCGATATTCGAAGTGAAATCAACTGCTGGTGATACCCATCTCGGAGGAGAAGACTT 11758449 Query 451600 TGATAATGCAATTGTGGAATGGTTGAAAACTGATGTTCAAC--GAAAACTA-AAAGTAGA 451656 |||| | ||| | || || | | ||| |||||| ||| || |||| || Sbjct 11758448 TGATCAACGAATGCTTCAACACTTTATGAATGA-GTTCAAAAGGAAGACCGGAAAG--GA 11758392 Query 451657 TATTTCTACTAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAAT 451716 ||||| | || | | ||| | ||||||| ||| | ||| || || | Sbjct 11758391 CATTTCACCCAATCCACGAGCCATCCGACGTCTCCGAACTGCTTGTGAACGTGCCAAGAG 11758332 Query 451717 TACACTC---AGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAAT 451773 ||||| |||||| | || | | || || ||||| | |||| ||||| Sbjct 11758331 AACACTTTCAAGTTCATCGGAAGCATGT-GTTGAAG--TTGATTCACTGTTTGAAGGAAT 11758275 Query 451774 GGAT-TATGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTG 451832 ||| ||||| || | | || |||||| || ||| | | ||| | | | || Sbjct 11758274 TGATCTATGC-ACAAAGATCACTCGTGCTCGTTTCGAAGAACTGTGTGCTGATCTATTC- 11758217 Query 451833 CACGGGTAA---TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATA 451889 ||| || || |||| ||||| | | | | ||| ||||| || ||| | Sbjct 11758216 --CGGAAAACTCTGGAACCAGTTGAGAAGGCTCTTCGAGATGCTAAACTTGACAAATCAA 11758159 Query 451890 AAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGT 451949 | || |||||| ||||| | || ||||| || || || |||| ||||||||| | || Sbjct 11758158 AGATCGATGAAGTTGTGTTGGTCGGAGGATCCACTCGTGTTCCGAAAATTCAAAAATTGC 11758099 Query 451950 TGT----CTTCTTATTTTGGA-GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGC 452004 || |||||| | | | |||| |||| | | ||||| |||||||| Sbjct 11758098 TGAAAGACTTCTTCAATGGAAAGGAATTGAACTGCTCCA-----TCAATCCAGATGAAGC 11758044 Query 452005 TGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAA-AA 452062 ||||||| |||||||||||||||||||||| | || | ||| ||| | ||||||| || Sbjct 11758043 AGTTGCATTTGGTGCTGCAGTTCAAGCAGCTGTACTTTCTGGTGTCA-AGGATGAAACAA 11757985 Query 452063 TTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGT 452122 | | | ||| | || | || ||||| | || | |||||| ||||||||||||| Sbjct 11757984 TCAAG-GATGTGTTGCTGGTTGATGTTGCTCCATTGAGCCTTGGAATTGAAACAGCTGGA 11757926 Query 452123 GGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTC----A 452178 || ||||||| ||| | ||| | ||| ||| ||||| || || || | | Sbjct 11757925 GGTGTGATGACCAATCTGATTGATCGAAACACTCGAATTCC----AACAAAAGCCTGCAA 11757870 Query 452179 AACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGA 452238 |||||| | |||| ||| || ||||||||||| | |||||||||| |||||| || Sbjct 11757869 AACATTCACTACATATGCTGACAATCAACCAGGTGTCTCAATTCAAGTGTATGAAGGTGA 11757810 Query 452239 ACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCC 452298 |||||||||||| || || ||| || || ||| ||| | || ||||| || Sbjct 11757809 ACGTGCAATGACTCGTGACAATCATCGCCTTGGAACATTCGAATTGTCTGGAATTCCACC 11757750 Query 452299 TATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCT 452358 | ||| | || ||| ||||||||| | || | |||| ||||||||||||| ||||| Sbjct 11757749 TGCTCCACGCGGTGTTCCACAAATTGAAGTCACTTTTGATATTGATGCAAATGGAATTCT 11757690 Query 452359 TAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGA 452418 |||||| || | || |||||| |||||||||| | ||| |||||| ||||| Sbjct 11757689 CAATGTGTCAGCTGAGGATAAATCAACTGGAAAATCCAATCGAATCACAATTCAAAATGA 11757630 Query 452419 TAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTC-- 452476 ||| || | | || ||||||||| |||||| ||||||| || ||||| Sbjct 11757629 GAAAGGACGGCTGACACAATCAGATATTGATCGAATGGTTCATGAAGCTAAACAATTCGA 11757570 Query 452477 -AAGGATGATGATGAACAAGTTAGAAAACATGTTGAAGCTAAAAACAAACTAGAAGGATA 452535 ||||| |||| ||||||| | ||| |||| | ||| || || |||||| ||| Sbjct 11757569 AAAGGAAGATGGTGAACAA---CGGGAACGTGTTCAGGCTCGTAATCAATTAGAAGCATA 11757513 Query 452536 T 452536 | Sbjct 11757512 T 11757512 Score = 325 bits (360), Expect = 2e-83 Identities = 878/1321 (66%), Gaps = 54/1321 (4%) Strand=Plus/Plus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| ||||| || || | ||||| || || ||||| |||||||| || ||| | Sbjct 11760158 TCCAGAAGAGATCTCTGCAATGGTACTCCAAAAGATGAAGGAAACAGCTGAGACTTATCT 11760217 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | | || | |||||||| || || ||||| || || ||||||||| || | Sbjct 11760218 CGGACATACCGTGAAAGATGCAGTTATCACAGTTCCTGCATACTTCAATGATAGTCAGAG 11760277 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 ||||||||| || ||||||| |||||||| | |||| |||||||||| ||||| Sbjct 11760278 GCAAGCAACAAAGGATGCAGCTACCATTGCTGGACTCAATGCAATTCGAATTATCAATGA 11760337 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaa 451482 ||| || || |||||||| ||||||||| | | ||| || || || || || || Sbjct 11760338 ACCAACTGCTGCTGCTCTTGCATATGGATTGGATAAAGGAATTCAA---GATGAGAAGAA 11760394 Query 451483 TATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGA 451542 | | || | || ||| | || ||||| || |||| ||| | |||||||||| || Sbjct 11760395 TGTATTGATCTTCGATCTCGGAGGAGGTACATTTGATGTTTCAATTCTTTCAATTGCTGA 11760454 Query 451543 TGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATAT 451599 || | |||| ||||| || |||| ||||||||| ||||| ||||| ||||| | Sbjct 11760455 AGGATCGATATTCGAAGTGAAATCAACTGCTGGTGATACCCATCTCGGAGGAGAAGACTT 11760514 Query 451600 TGATAATGCAATTGTGGAATGGTTGAAAACTGATGTTCAAC--GAAAACTA-AAAGTAGA 451656 |||| | ||| | || || | | ||| |||||| ||| || |||| || Sbjct 11760515 TGATCAACGAATGCTTCAACACTTTATGAATGA-GTTCAAAAGGAAGACCGGAAAG--GA 11760571 Query 451657 TATTTCTACTAACCAAAAAGCACTTAGACGTCTTAAAACATCAGCAGAAAAAGCTAAAAT 451716 ||||| | || | | ||| | ||||||| ||| | ||| || || | Sbjct 11760572 CATTTCACCCAATCCACGAGCCATCCGACGTCTCCGAACTGCTTGTGAACGTGCCAAGAG 11760631 Query 451717 TACACTC---AGTTCAACACAAACTACTAGTATAAACATTGATAGTTTAGTTGATGGAAT 451773 ||||| |||||| | || | | || || ||||| | |||| ||||| Sbjct 11760632 AACACTTTCAAGTTCATCGGAAGCATGT-GTTGAAG--TTGATTCACTGTTTGAAGGAAT 11760688 Query 451774 GGAT-TATGCTACTACTCTTACCCGTGCTAAATTTGAATCAATTTGTTCCAGTATTTTTG 451832 ||| ||||| || | | || |||||| || ||| | | ||| | | | || Sbjct 11760689 TGATCTATGC-ACAAAGATCACTCGTGCTCGTTTCGAAGAACTGTGTGCTGATCTATTC- 11760746 Query 451833 CACGGGTAA---TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATA 451889 ||| || || |||| ||||| | | | | ||| ||||| || ||| | Sbjct 11760747 --CGGAAAACTCTGGAACCAGTTGAGAAGGCTCTTCGAGATGCTAAACTTGACAAATCAA 11760804 Query 451890 AAATTGATGAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGT 451949 | || |||||| ||||| | || ||||| || || || |||| ||||||||| | || Sbjct 11760805 AGATCGATGAAGTTGTGTTGGTCGGAGGATCCACTCGTGTTCCGAAAATTCAAAAATTGC 11760864 Query 451950 TGT----CTTCTTATTTTGGA-GGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGC 452004 || |||||| | | | |||| |||| | | ||||| |||||||| Sbjct 11760865 TGAAAGACTTCTTCAATGGAAAGGAATTGAACTGCTCCA-----TCAATCCAGATGAAGC 11760919 Query 452005 TGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TCAGATGATGAAA-AA 452062 ||||||| |||||||||||||||||||||| | || | ||| ||| | ||||||| || Sbjct 11760920 AGTTGCATTTGGTGCTGCAGTTCAAGCAGCTGTACTTTCTGGTGTCA-AGGATGAAACAA 11760978 Query 452063 TTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGT 452122 | | | ||| | || | || ||||| | || | |||||| ||||||||||||| Sbjct 11760979 TCAAG-GATGTGTTGCTGGTTGATGTTGCTCCATTGAGCCTTGGAATTGAAACAGCTGGA 11761037 Query 452123 GGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTC----A 452178 || ||||||| ||| | ||| | ||| ||| ||||| || || || | | Sbjct 11761038 GGTGTGATGACCAATCTGATTGATCGAAACACTCGAATTCC----AACAAAAGCCTGCAA 11761093 Query 452179 AACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGA 452238 |||||| | |||| ||| || ||||||||||| | |||||||||| |||||| || Sbjct 11761094 AACATTCACTACATATGCTGACAATCAACCAGGTGTCTCAATTCAAGTGTATGAAGGTGA 11761153 Query 452239 ACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCC 452298 |||||||||||| || || ||| || || ||| ||| | || ||||| || Sbjct 11761154 ACGTGCAATGACTCGTGACAATCATCGCCTTGGAACATTCGAATTGTCTGGAATTCCACC 11761213 Query 452299 TATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCT 452358 | ||| | || ||| ||||||||| | || | |||| ||||||||||||| ||||| Sbjct 11761214 TGCTCCACGCGGTGTTCCACAAATTGAAGTCACTTTTGATATTGATGCAAATGGAATTCT 11761273 Query 452359 TAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGA 452418 |||||| || | || |||||| |||||||||| | ||| |||||| ||||| Sbjct 11761274 CAATGTGTCAGCTGAGGATAAATCAACTGGAAAATCCAATCGAATCACAATTCAAAATGA 11761333 Query 452419 TAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTC-- 452476 ||| || | | || ||||||||| |||||| ||||||| || ||||| Sbjct 11761334 GAAAGGACGGCTGACACAATCAGATATTGATCGAATGGTTCATGAAGCTAAACAATTCGA 11761393 Query 452477 -AAGGATGATGATGAACAAGTTAGAAAACATGTTGAAGCTAAAAACAAACTAGAAGGATA 452535 ||||| |||| ||||||| | ||| |||| | ||| || || |||||| ||| Sbjct 11761394 AAAGGAAGATGGTGAACAA---CGGGAACGTGTTCAGGCTCGTAATCAATTAGAAGCATA 11761450 Query 452536 T 452536 | Sbjct 11761451 T 11761451 Score = 107 bits (118), Expect = 8e-18 Identities = 245/363 (67%), Gaps = 8/363 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 ||||||||||| | || | ||||||||||| || ||||| | | || ||| || Sbjct 7351950 CTCCTGAAGAAGTCTCTGCCATGGTTCTTACGAAGATGAAGCAGATTGCCGAATCCTACC 7351891 Query 451302 TTGGTTCTCCAGTTACTGAT-GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAA 451360 ||||| | | || | || || || | || || || || || ||||||||||| ||| Sbjct 7351890 TTGGT-CACGAGGTGAAGAACGCCGTTGTCACCGTGCCAGCATACTTCAATGATGCTCAA 7351832 Query 451361 CGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAAT 451420 ||||| || || ||||||||| |||||| || | || ||| | |||| || || Sbjct 7351831 AAACAAGCCACCAAGGATGCAGGATCTATTGCCGGACTTAACGTTGTGAGAATCATCAAC 7351772 Query 451421 GAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaa 451480 ||||| ||||| || || | || |||||| | ||| || ||||| | |||| Sbjct 7351771 GAACCAACAGCGGCAGCCATCGCTTATGGA-TTGGATAA--GAAAGA---TGGAGAACGC 7351718 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 || ||| | || || ||||| || || |||||| ||| || | ||| | || || Sbjct 7351717 AACATTCTTGTCTTCGATTTGGGAGGTGGAACTTTCGATGTATCCCTTCTTACCATCGAC 7351658 Query 451541 GATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATT 451600 || || || || || || || ||||| ||||| ||| | ||||| |||||| | Sbjct 7351657 AGCGGAGTTTTCGAGGTTCTTGCCACTAATGGAGATACCCATTTGGGAGGAGAAGATTTC 7351598 Query 451601 GAT 451603 ||| Sbjct 7351597 GAT 7351595 >seq1 Length=15072434 Score = 172 bits (190), Expect = 2e-37 Identities = 333/484 (69%), Gaps = 8/484 (2%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGTTCA 452050 ||||| || ||||| || || | |||||| || |||||||||||| | || | || | Sbjct 9321251 AATCCAGACGAAGCAGTAGCCTTTGGTGCAGCCGTTCAAGCAGCTGTACTTTCTGGAGTA 9321192 Query 452051 GATGATGAAAA-ATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | ||||| | || | | ||| || | | || ||||| || ||| || |||| | Sbjct 9321191 AAAGATGATACTATCAAG-GATGTTTTACTCGTTGATGTTGTCCCACTAAGTCATGGAAT 9321133 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 |||||||||||| ||| | ||||| ||||| ||| | || ||| |||||| || Sbjct 9321132 TGAAACAGCTGGAGGAGTAATGACCAATTTGATTGATAGAAACACTAGAATTCCTGCCAA 9321073 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGT-GATAACCAACCAGGTGTAACTATTCAAGT 452226 | | || ||||||||| || | | | || || || || ||||| |||||||||| Sbjct 9321072 A--GCTTCCAAAACATTTACAAC-GTATGCAGACAATCAGCCTGGTGTCTCTATTCAAGT 9321016 Query 452227 GTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTC 452286 | |||||||||||||| ||||| ||||||||| || || ||| |||| | | Sbjct 9321015 ATACGAAGGAGAACGTGCTATGACTCGAGATAATCATCGTCTTGGAACATTTGAATTAAC 9320956 Query 452287 AAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATGC 452346 || || || ||| | ||| ||| ||| | || | || | |||| ||||||| Sbjct 9320955 TGGAATCCCACCAGCTCCACGAGGAGTTCCACAAGTCGATGTAACGTTTGATATTGATGC 9320896 Query 452347 AAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTAC 452406 |||||| ||||| ||||| || | || |||||| |||| | |||| | | |||||| Sbjct 9320895 AAATGGAATTCTCAATGTATCAGCTGCCGATAAATCAACTGGTAGATCAAACAGAATTAC 9320836 Query 452407 AATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAGC 452466 |||| ||||| || || | ||| ||| |||||||| | |||||| ||||||| Sbjct 9320835 AATTCGCAATGAGAAGGGACGACTCTCTCAAGCTGATATTGATAGAATGGTCAATGAAGC 9320776 Query 452467 AGAA 452470 | || Sbjct 9320775 AAAA 9320772 Score = 156 bits (172), Expect = 2e-32 Identities = 258/365 (71%), Gaps = 12/365 (3%) Strand=Plus/Minus Query 451245 CTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA-TT 451303 |||||||||| || | ||||| ||| || ||||||||||| || ||| | || || Sbjct 9322058 CTGAAGAAATATCTGCAATGGTACTTCAGAAGATGAAAGAAACGGCTGAAGC-TGTACTT 9322000 Query 451304 GGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGG 451363 || | | || ||||| || |||||||| || || ||||| |||||| || || Sbjct 9321999 GGGCATTCTGTACGGGATGCTGTCATTACTGTGCCTGCATATTTTAATGATAGCCAGAGG 9321940 Query 451364 CAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAA 451423 || || || |||||||||| ||||||||| | |||| |||| ||||| |||||| Sbjct 9321939 CAGGCGACCAAAGATGCAGCTACTATTGCTGGACTCAATGCAATTCGTATTATCAATGAA 9321880 Query 451424 CCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAA--ACAGAAGaaaaaa 451481 || || || || ||| | || |||||||| | || ||| ||| || || || || | Sbjct 9321879 CCAACGGCGGCAGCTTTGGCCTATGGACTCG----AT-AAAGGAATTACTGATGAGAAGA 9321825 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 ||||||| | || ||||| || ||||| || |||| || | ||||| |||| | Sbjct 9321824 ATATTTTGATTTTCGATTTGGGAGGAGGTACATTTGATGTCTCGATCCTTTCGATTGCGG 9321765 Query 451542 ATGGGG-TATTT--GAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATA 451598 | || ||||| ||||| ||| |||| || ||||||||||| ||||| ||||| Sbjct 9321764 AAGGATCTATTTTCGAAGTCAAGTCAACTGCAGGAGATACTCATCTTGGAGGAGAAGACT 9321705 Query 451599 TTGAT 451603 ||||| Sbjct 9321704 TTGAT 9321700 >seq3 Length=13783801 Score = 105 bits (116), Expect = 3e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| ||||| ||||||| |||||||| || || || || || | Sbjct 5940988 ATCATGCAAATCTTCGTCAAAACGTTGACTGGAAAAACTATCACCCTGGAGGTGGAGGCT 5941047 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || |||| ||| ||| | | ||| || || ||||| |||||||||||||| || ||| Sbjct 5941048 TCCGATACCATCGAAAATGTCAAAGCCAAGATCCAAGACAAGGAAGGAATTCCACCAGAT 5941107 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || ||| | || ||| | || || || || || || || | || || | || || Sbjct 5941108 CAGCAGCGTCTCATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTGTCTGACTAC 5941167 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || || | ||||| | || |||||||| || | | || |||||| ||| || Sbjct 5941168 AACATCCAGAAGGAATCTACTCTTCACTTGGTTCTTCGTCTTAGAGGAGGAATGCA 5941223 Score = 104 bits (114), Expect = 9e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||| || || |||||||||||||| |||||| | || Sbjct 5942005 AATGCAGATCTTCGTCAAGACTTTGACCGGAAAGACTATTACTCTTGAGGTTGAAGCTTC 5942064 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||| | || || || ||||| |||||||| || || || ||||| Sbjct 5942065 TGACACTATTGAGAACGTGAAGGCCAAGATCCAAGACAAGGAAGGTATCCCACCAGATCA 5942124 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| ||||| || || | || || ||||| || ||||| | ||| | | ||||| || Sbjct 5942125 ACAGCGTTTGATCTTTGCCGGAAAGCAACTCGAGGATGGCCGTACTCTCTCCGATTACAA 5942184 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || ||||| || || Sbjct 5942185 CATCCAAAAGGAGTCTACTCTTCATTTGGT 5942214 Score = 100 bits (110), Expect = 1e-15 Identities = 157/225 (70%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||| ||||||| || || || || ||||| || ||| | ||| Sbjct 5942966 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACACTTGAAGTCGAAGCCTCT 5943025 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || |||||||| ||||||||||| || || ||||| Sbjct 5943026 GATACCATCGAGAATGTGAAGGCCAAGATTCAAGACAAGGAAGGAATCCCACCAGATCAG 5943085 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || | | || ||| | || |||||||| ||||| || | || | | || || || Sbjct 5943086 CAGAGACTCATCTTCGCCGGAAAACAACTCGAAGACGGTCGTACCCTCTCCGACTACAAC 5943145 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| | || ||||| || || | | ||||||||| Sbjct 5943146 ATCCAAAAGGAGTCTACTCTTCATTTGGTTCTCCGTCTGAGAGGA 5943190 Score = 87.8 bits (96), Expect = 7e-12 Identities = 155/226 (69%), Gaps = 0/226 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || || | || || || || || || || || ||| | || Sbjct 5942233 AATGCAAATCTTCGTCAAGACTCTTATCGGAAAGACCATCACCCTCGAAGTCGAAGCCTC 5942292 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 |||| ||| || | || || ||||| || ||||||||||||||||| ||||| Sbjct 5942293 CGATACCATCGAGAACGTGAAGGCCAAGATTCAGGACAAGGAAGGAATTCCTCCAGATCA 5942352 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||||| | || ||| | || || || || ||||| || | || | |||| || || Sbjct 5942353 GCAACGTCTCATCTTCGCTGGAAAGCAGCTCGAAGACGGCCGCACCCTTTCGGACTACAA 5942412 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| |||| ||||| || || | | |||||||| Sbjct 5942413 CATCCAGAAGGAATCAACTCTTCATTTGGTTCTCCGTTTGAGAGGA 5942458 Score = 86.0 bits (94), Expect = 2e-11 Identities = 154/225 (68%), Gaps = 0/225 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || ||| ||||||| || || || || ||||| || ||| | || Sbjct 5941497 ATGCAGATCTTCGTCAAGACATTGACTGGAAAGACCATCACACTTGAAGTCGAAGCTTCC 5941556 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || ||| | | || || ||||||||||| |||||||| || || ||||| Sbjct 5941557 GACACGATCGAAAATGTCAAGGCTAAGATTCAAGATAAAGAAGGAATCCCACCAGATCAG 5941616 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | | || ||| | || || || || || || || | || | |||| || || Sbjct 5941617 CAAAGACTTATCTTCGCCGGAAAGCAGCTCGAGGACGGCCGCACCCTTTCGGACTACAAC 5941676 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 || | ||||| |||| ||||| || || | | |||||||| Sbjct 5941677 ATCCAGAAGGAATCAACTCTTCATTTGGTTCTCCGTTTGAGAGGA 5941721 Score = 86.0 bits (94), Expect = 2e-11 Identities = 94/125 (75%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 451322 GCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCA 451381 ||||| |||||||| || || |||||||||| |||| || ||| || |||| || Sbjct 13396469 GCAGTGATTACTGTACCTGCATATTTCAATGCAACACAGAGGAGAGCCACGGAAGAAGCT 13396528 Query 451382 GGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTA 451441 | | ||||| ||||| || |||||||||||| | || || || |||||||| || || Sbjct 13396529 GCTGAGATTGCAGGTTTGAAAGTTCTTCGAATTTTGAACGAGCCAACAGCAGCCGCAATA 13396588 Query 451442 GCATA 451446 ||||| Sbjct 13396589 GCATA 13396593 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975718222802756