Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq2 401 5e-106 seq1 223 3e-52 seq6 100 2e-15 seq4 98.7 8e-15 seq5 95.1 9e-14 >seq2 Length=15279421 Score = 401 bits (444), Expect = 5e-106 Identities = 950/1419 (67%), Gaps = 37/1419 (3%) Strand=Plus/Plus Query 517232 TTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAA 517291 |||||||| ||||||||||| | || | |||||| ||||| ||||| ||||| | | Sbjct 11757651 TTGGATTTTCCAGTTGATTTATCCTCAGCTGACACATTGAGAATTCCATTTGCATCAATA 11757710 Query 517292 TCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTA 517351 ||||| |||||||||||||| || || || | |||||||||| || || ||| | Sbjct 11757711 TCAAAAGTGACTTCAATTTGTGGAACACCGCGTGGAGCAGGTGGAATTCCAGACAATTCG 11757770 Query 517352 AATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATA 517411 |||||||| || || ||| || ||| | | |||||||| || | | ||| || Sbjct 11757771 AATGTTCCAAGGCGATGATTGTCACGAGTCATTGCACGTTCACCTTCATACACTTGAATT 11757830 Query 517412 GTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATT 517471 | || | | |||||| || | ||| || || ||| | || | ||| |||||| Sbjct 11757831 GAGACACCTGGTTGATTGTCAGCATATGTAGTGAATGTTTTGCAGGCTTTTGTTGGAATT 11757890 Query 517472 GTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAA 517531 ||||||| |||||| | ||||||||| | ||| || |||||||| | ||||| Sbjct 11757891 CGAGTGTTTCGATCAATCAGATTGGTCATCACACCTCCAGCTGTTTCAATTCCAAGGCTC 11757950 Query 517532 AGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGA 517591 | |||| |||||||| || | | || | | | ||||||| | |||| ||| Sbjct 11757951 AATGGAGCAACATCAACCAGCAACACATCCTTGATTGTTTCATCCTTGACACCAGAAAGT 11758010 Query 517592 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 517651 | ||||||||||| ||||||||| ||||||| |||||||| ||||| | | || Sbjct 11758011 ACAGCTGCTTGAACTGCAGCACCAAATGCAACTGCTTCATCTGGATTGATGGAGCAGTTC 11758070 Query 517652 AGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGAT 517711 | || || |||||||| || | | || | || | | || |||| ||||| ||| Sbjct 11758071 AATTCCTTTCCATTGAAGAAGTCTTTCAGCAATTTTTGAATTTTCGGAACACGAGTGGAT 11758130 Query 517712 CCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACT 517771 ||||| || || |||| ||||| | || |||||| || ||||| | ||| | | | Sbjct 11758131 CCTCCGACCAACACAACTTCATCGATCTTTGATTTGTCAAGTTTAGCATCTCGAAGAGCC 11758190 Query 517772 TTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCT 517831 || ||||| ||||| ||| | || | || | ||| ||||||||||| Sbjct 11758191 TTCTCAACTGGTTCCAGAGTTTTCCGGAATAGATCAGCACACAGTTCTTCGAA------A 11758244 Query 517832 CTAGTAAGAGTGACATT-----ATA-ATCAATTCCTTCGAACAAAGAATCAACTTCAATC 517885 | || | |||||| || ||| |||||||||||| |||| ||||||||||||| Sbjct 11758245 CGAGCACGAGTGATCTTTGTGCATAGATCAATTCCTTCAAACAGTGAATCAACTTCAACA 11758304 Query 517886 GTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTT 517945 | || | ||| || |||| | || ||||||||||| || || | || | | Sbjct 11758305 CATGCTTCCGATGAACTTGAAAGTGTTCTCTTGGCACGTTCACAAGCAGTTCGGAGACGT 11758364 Query 517946 CGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTT--ATATTTTCTCTTGAAATCTTCAA 518003 || | |||| || ||||| | |||| | ||| || || ||||| || | Sbjct 11758365 CGGATGGCTCGTG--GATTGGGTGAAATGTCCTTTCCGGTCTTCCTTTTGAACTCAT--T 11758420 Query 518004 CACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGA 518061 || | |||| | | || | |||||| ||||| ||||| | | |||| || | Sbjct 11758421 CATAAAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCCGAGATGGGTATCACCAGC 11758480 Query 518062 CGTAGCTCTTACTTGGAAAAGTCCAT-CTTCAAGAGACAAAAGAGTT---ACATCATGGG 518117 || | | | |||| ||| | || || ||||| | ||||| || |||||| | Sbjct 11758481 AGTTGATTTCACTTCGAATA-TCGATCCTTCAGCAATTGAAAGAATTGAAACATCAAATG 11758539 Query 518118 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT---TTTATCAA 518174 | || || || | ||| || || | ||||||| ||| | ||||| | |||||| | Sbjct 11758540 TACCTCCTCCGAGATCGAAGATCAATACATTC--TTC-TCATCTTGAATTCCTTTATCCA 11758596 Query 518175 GACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAG 518234 ||||| |||| ||||||||||||||||||||| ||||||| | |||| || |||| Sbjct 11758597 ATCCATATGCAAGAGCAGCAGCAGTTGGTTCATTGATAATTCGAATTGCATTGAGTCCAG 11758656 Query 518235 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAG 518294 |||| | ||||||| || || ||||| || || ||| || || ||||||||||| | Sbjct 11758657 CAATGGTAGCTGCATCCTTTGTTGCTTGCCTCTGACTATCATTGAAGTATGCAGGAACTG 11758716 Query 518295 TAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTAC 518354 | ||||| ||||| | || | || | ||||| || |||| ||||| || Sbjct 11758717 TGATAACTGCATCTTTCACGGTATGTCCGAGATAAGTCTCAGCTGTTTCCTTCATCTTTT 11758776 Query 518355 TTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGAT 518413 | | ||||| || || | |||||| ||||| | ||| ||| | | | Sbjct 11758777 GGAGTACCATTGCAGAGATCTCTTCTGGATTGAATTGCCTCTTTTCTCCTTTCACTTCA- 11758835 Query 518414 ACTTCAAAATATGGTTT--ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATAT 518471 ||||||| |||||| || | || | ||| ||||||||| | || | Sbjct 11758836 ACTTCAATCACTGGTTTTCCTTGTTTTCCTT--TCACTCCAAATGGCCAATGCTTACAGT 11758893 Query 518472 CTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAG 518531 |||||||||| || |||| ||| || ||||| |||| |||||||||||| | | Sbjct 11758894 CTGATTGAACTGTTGATTCATCGAAACGTCGTCCAATCAATCTTTTTGCATCAAATACTG 11758953 Query 518532 TATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT 518591 |||| ||||||| || ||||||| ||| ||||||||||||| || ||| || | Sbjct 11758954 TATTCTCTGGATTACGAGCTGCTTGATCTTTTGCTGCATCTCCAACCAATCTTTCCGTAT 11759013 Query 518592 CTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 518630 |||| |||| || |||||||||||||| ||| |||| Sbjct 11759014 CTGTGAATGCCACGTATGATGGAGTTGTCTTATTTCCTT 11759052 Score = 401 bits (444), Expect = 5e-106 Identities = 950/1419 (67%), Gaps = 37/1419 (3%) Strand=Plus/Minus Query 517232 TTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAA 517291 |||||||| ||||||||||| | || | |||||| ||||| ||||| ||||| | | Sbjct 11761312 TTGGATTTTCCAGTTGATTTATCCTCAGCTGACACATTGAGAATTCCATTTGCATCAATA 11761253 Query 517292 TCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTA 517351 ||||| |||||||||||||| || || || | |||||||||| || || ||| | Sbjct 11761252 TCAAAAGTGACTTCAATTTGTGGAACACCGCGTGGAGCAGGTGGAATTCCAGACAATTCG 11761193 Query 517352 AATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATA 517411 |||||||| || || ||| || ||| | | |||||||| || | | ||| || Sbjct 11761192 AATGTTCCAAGGCGATGATTGTCACGAGTCATTGCACGTTCACCTTCATACACTTGAATT 11761133 Query 517412 GTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATT 517471 | || | | |||||| || | ||| || || ||| | || | ||| |||||| Sbjct 11761132 GAGACACCTGGTTGATTGTCAGCATATGTAGTGAATGTTTTGCAGGCTTTTGTTGGAATT 11761073 Query 517472 GTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAAACCAAGAGAA 517531 ||||||| |||||| | ||||||||| | ||| || |||||||| | ||||| Sbjct 11761072 CGAGTGTTTCGATCAATCAGATTGGTCATCACACCTCCAGCTGTTTCAATTCCAAGGCTC 11761013 Query 517532 AGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGA 517591 | |||| |||||||| || | | || | | | ||||||| | |||| ||| Sbjct 11761012 AATGGAGCAACATCAACCAGCAACACATCCTTGATTGTTTCATCCTTGACACCAGAAAGT 11760953 Query 517592 ATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTT 517651 | ||||||||||| ||||||||| ||||||| |||||||| ||||| | | || Sbjct 11760952 ACAGCTGCTTGAACTGCAGCACCAAATGCAACTGCTTCATCTGGATTGATGGAGCAGTTC 11760893 Query 517652 AGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGAT 517711 | || || |||||||| || | | || | || | | || |||| ||||| ||| Sbjct 11760892 AATTCCTTTCCATTGAAGAAGTCTTTCAGCAATTTTTGAATTTTCGGAACACGAGTGGAT 11760833 Query 517712 CCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACT 517771 ||||| || || |||| ||||| | || |||||| || ||||| | ||| | | | Sbjct 11760832 CCTCCGACCAACACAACTTCATCGATCTTTGATTTGTCAAGTTTAGCATCTCGAAGAGCC 11760773 Query 517772 TTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCT 517831 || ||||| ||||| ||| | || | || | ||| ||||||||||| Sbjct 11760772 TTCTCAACTGGTTCCAGAGTTTTCCGGAATAGATCAGCACACAGTTCTTCGAA------A 11760719 Query 517832 CTAGTAAGAGTGACATT-----ATA-ATCAATTCCTTCGAACAAAGAATCAACTTCAATC 517885 | || | |||||| || ||| |||||||||||| |||| ||||||||||||| Sbjct 11760718 CGAGCACGAGTGATCTTTGTGCATAGATCAATTCCTTCAAACAGTGAATCAACTTCAACA 11760659 Query 517886 GTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTT 517945 | || | ||| || |||| | || ||||||||||| || || | || | | Sbjct 11760658 CATGCTTCCGATGAACTTGAAAGTGTTCTCTTGGCACGTTCACAAGCAGTTCGGAGACGT 11760599 Query 517946 CGTAAGGCTTTTGCTGATTGATTCAAATCTGTTTT--ATATTTTCTCTTGAAATCTTCAA 518003 || | |||| || ||||| | |||| | ||| || || ||||| || | Sbjct 11760598 CGGATGGCTCGTG--GATTGGGTGAAATGTCCTTTCCGGTCTTCCTTTTGAACTCAT--T 11760543 Query 518004 CACACCATGTT--ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGA 518061 || | |||| | | || | |||||| ||||| ||||| | | |||| || | Sbjct 11760542 CATAAAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCCGAGATGGGTATCACCAGC 11760483 Query 518062 CGTAGCTCTTACTTGGAAAAGTCCAT-CTTCAAGAGACAAAAGAGTT---ACATCATGGG 518117 || | | | |||| ||| | || || ||||| | ||||| || |||||| | Sbjct 11760482 AGTTGATTTCACTTCGAATA-TCGATCCTTCAGCAATTGAAAGAATTGAAACATCAAATG 11760424 Query 518118 TTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTT---TTTATCAA 518174 | || || || | ||| || || | ||||||| ||| | ||||| | |||||| | Sbjct 11760423 TACCTCCTCCGAGATCGAAGATCAATACATTC--TTC-TCATCTTGAATTCCTTTATCCA 11760367 Query 518175 GACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAG 518234 ||||| |||| ||||||||||||||||||||| ||||||| | |||| || |||| Sbjct 11760366 ATCCATATGCAAGAGCAGCAGCAGTTGGTTCATTGATAATTCGAATTGCATTGAGTCCAG 11760307 Query 518235 CAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAG 518294 |||| | ||||||| || || ||||| || || ||| || || ||||||||||| | Sbjct 11760306 CAATGGTAGCTGCATCCTTTGTTGCTTGCCTCTGACTATCATTGAAGTATGCAGGAACTG 11760247 Query 518295 TAATAACGGCATCAGTTACTTCTTTACCAATATAAGCGCTTGCCGTTTGTTTCATTTTAC 518354 | ||||| ||||| | || | || | ||||| || |||| ||||| || Sbjct 11760246 TGATAACTGCATCTTTCACGGTATGTCCGAGATAAGTCTCAGCTGTTTCCTTCATCTTTT 11760187 Query 518355 TTAAAATCATTGATGAAATTTGTTCTGGGGAATATTGCTTGGATTC-ATTTTGATATGAT 518413 | | ||||| || || | |||||| ||||| | ||| ||| | | | Sbjct 11760186 GGAGTACCATTGCAGAGATCTCTTCTGGATTGAATTGCCTCTTTTCTCCTTTCACTTCA- 11760128 Query 518414 ACTTCAAAATATGGTTT--ATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATAT 518471 ||||||| |||||| || | || | ||| ||||||||| | || | Sbjct 11760127 ACTTCAATCACTGGTTTTCCTTGTTTTCCTT--TCACTCCAAATGGCCAATGCTTACAGT 11760070 Query 518472 CTGATTGAACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAG 518531 |||||||||| || |||| ||| || ||||| |||| |||||||||||| | | Sbjct 11760069 CTGATTGAACTGTTGATTCATCGAAACGTCGTCCAATCAATCTTTTTGCATCAAATACTG 11760010 Query 518532 TATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCT 518591 |||| ||||||| || ||||||| ||| ||||||||||||| || ||| || | Sbjct 11760009 TATTCTCTGGATTACGAGCTGCTTGATCTTTTGCTGCATCTCCAACCAATCTTTCCGTAT 11759950 Query 518592 CTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTT 518630 |||| |||| || |||||||||||||| ||| |||| Sbjct 11759949 CTGTGAATGCCACGTATGATGGAGTTGTCTTATTTCCTT 11759911 Score = 100 bits (110), Expect = 2e-15 Identities = 96/123 (78%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 366997 GTAGCCACAATAGCATTTGGTATGGGTATTAATAAACCGGATGTTAGAGTTGTTATTCAT 367056 || || ||| | |||||||||||||| ||| | ||||| || ||| || ||| |||||| Sbjct 6557043 GTTGCGACAGTTGCATTTGGTATGGGAATTGACAAACCCGACGTTCGAAATGTGATTCAT 6557102 Query 367057 TATGGAGCTCCCAAGAATATTGAAGGTTATTATCAAGAAATTGGTAGAGCAGGTCGTGAT 367116 || ||| || || ||||| ||| |||||||||||||| || ||||| ||||| ||| Sbjct 6557103 TACGGATGCCCGAACAATATCGAATCATATTATCAAGAAATCGGAAGAGCTGGTCGAGAT 6557162 Query 367117 GGA 367119 ||| Sbjct 6557163 GGA 6557165 >seq1 Length=15072434 Score = 223 bits (246), Expect = 3e-52 Identities = 352/501 (70%), Gaps = 4/501 (1%) Strand=Plus/Plus Query 517142 TCTGCTTCTTCAAATTCTTTAGCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAAT 517201 ||| || |||||| | ||| ||||| | | |||||| ||||| | | ||| ||||| | Sbjct 9320755 TCTTCTCTTTCAAACTGTTTTGCTTCATTGACCATTCTATCAATATCAGCTTGAGAGAGT 9320814 Query 517202 CTTCCGCGATTATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCA 517261 | ||| | ||| ||| ||||| | || ||| | ||||||||||| || || Sbjct 9320815 CGTCCCTTCTCATTGCGAATTGTAATTCTGTTTGATCTACCAGTTGATTTATCGGCAGCT 9320874 Query 517262 GTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCT 517321 | ||||| ||||| ||||| ||||| | |||||| || || || | ||| || || ||| Sbjct 9320875 GATACATTGAGAATTCCATTTGCATCAATATCAAACGTTACATCGACTTGTGGAACTCCT 9320934 Query 517322 CTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTG 517381 | |||| |||||||| || || | ||||||||| ||| || ||||||| ||| Sbjct 9320935 CGTGGAGCTGGTGGGATTCCAGTTAATTCAAATGTTCCAAGACGATGATTATCTCGAGTC 9320994 Query 517382 AATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTT 517441 | ||||| || ||| | | ||| |||| || ||| ||||| |||| ||| ||| Sbjct 9320995 ATAGCACGTTCTCCTTCGTATACTTGAATAGAGACACCAGGCTGATTGTCTGCATACGTT 9321054 Query 517442 GTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATA 517501 |||||| | |||| ||| ||||||| | |||||||||||||| | ||||||||| Sbjct 9321055 GTAAATGTTTTGGAAGCTTTGGCAGGAATTCTAGTGTTTCTATCAATCAAATTGGTCATT 9321114 Query 517502 ATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATAT-T 517560 | || || |||||||| | ||| || || || |||||||| || | || || Sbjct 9321115 ACTCCTCCAGCTGTTTCAATTCCATGACTTAGTGGGACAACATCAACGAGTAAAACATCC 9321174 Query 517561 TTGA-AGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATG 517619 |||| || | ||||| || ||| ||| | ||||||||||| || |||||| | | Sbjct 9321175 TTGATAG--TATCATCTTTTACTCCAGAAAGTACAGCTGCTTGAACGGCTGCACCAAAGG 9321232 Query 517620 CAACAGCTTCATCAGGATTAA 517640 | || ||||| || ||||||| Sbjct 9321233 CTACTGCTTCGTCTGGATTAA 9321253 Score = 215 bits (238), Expect = 4e-50 Identities = 672/1014 (66%), Gaps = 35/1014 (3%) Strand=Plus/Plus Query 517658 TTACCATTGAAAAAATTTGAAAGAAGTTGTCTTAC-CTTAGGAATACGAGATGATCCTCC 517716 || ||||||||||| | || |||| ||| | ||| || ||||||| |||||| || Sbjct 9321332 TTCCCATTGAAAAACTCCTTCAGTAGTT-TCTGAATCTTCGGTATACGAGTTGATCCCCC 9321390 Query 517717 AACTAATACAATTTCATGCACCTGTGA-TTTATCCAGTTTTGAATCCAATAAAACTTTTT 517775 ||| || |||| ||||| | | || |||||| ||||| ||| | | |||| Sbjct 9321391 AACCAAGACAACTTCATCGAT-TCTGCCTTTATCAGTTTTTGCATCACGAAGTGCCTTTT 9321449 Query 517776 CAACGGGTTC--AAGACCCGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCT 517833 |||| || || ||| | || ||| | || | ||| || ||||||||| | || | Sbjct 9321450 CAACCGGCTCCAAAGTCTTGCGGAAAAGA--TCAGCACAGAGCTCTTCGAATCTTGCACG 9321507 Query 517834 AGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTG 517893 || | | || ||||| |||| || || || ||||| || || | || | || Sbjct 9321508 TGTGATTTTCGAATAGAAATCAGTTCCATCAAATAACGAATCGACCTCTACAGTTGCTTC 9321567 Query 517894 AGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGC 517953 ||| ||| || || | ||| ||||||||||||||||| || | || | || | || Sbjct 9321568 AGTGGAACTGGAAAGAGTACGCTTAGCACGTTCACATGCCGTTCGGAGACGACGAATTGC 9321627 Query 517954 TTTTGCTGATTGATTCAAATCTGTTTTATA--TTTTCTCTTGAAATCT-TCAACACACCA 518010 | |||| | |||| | |||| | |||||| ||||| || ||| | | Sbjct 9321628 GCGGG--GATTTGATGAAATATCTTTTCCAGTTTTTCTTTTGAATTCGGTCATAAAATGT 9321685 Query 518011 TGTTACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCT 518070 ||| | || ||| |||||| ||||| ||||| | | ||||| ||||| || | | Sbjct 9321686 TGT-AGAACTCGAGAATCAAAGTCTTCTCCTCCAAGATGAGTATCTCCTGCAGTTGACTT 9321744 Query 518071 TACTTGGAAAAG---TCCATCTTCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACC 518127 |||| ||||| ||| || ||| || | | | |||||| || || || || Sbjct 9321745 GACTTCGAAAATAGATCCTTCCGCAATCGAAAGGATCGAGACATCAAATGTACCTCCTCC 9321804 Query 518128 CATATCAAAAATAAGTACATTCATTTCTTT-GTCTTGGTTTTTATCAAGACCATACGCAA 518186 || ||| ||||| | | |||| | || | || | ||| ||| || ||||| || | Sbjct 9321805 CAAATCGAAAATCAAAATATTCTTCTCATCAGTAATTCCTTT-ATCGAGTCCATAGGCCA 9321863 Query 518187 AAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTG 518246 |||| || || ||||||||||| ||||| | | |||| || |||||||| | ||| Sbjct 9321864 AAGCTGCCGCCGTTGGTTCATTGATAATACGAATTGCATTGAGTCCAGCAATAGTAGCTG 9321923 Query 518247 CATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 518306 ||||||| || || || || || ||| |||||||||||||| |||||||| || |||| Sbjct 9321924 CATCTTTGGTCGCCTGCCTCTGGCTATCATTAAAATATGCAGGCACAGTAATGACAGCAT 9321983 Query 518307 CAGTTACTTCTTTACCAA-TATAAGCGCTT--GCCGTTTGTTTCATTTTACTTAA-AATC 518362 | ||| | |||| || | |||| ||||||| |||||| || || || | | Sbjct 9321984 CCCGTACAGAATGCCCAAGTACA---GCTTCAGCCGTTTCTTTCATCTT-CTGAAGTACC 9322039 Query 518363 ATTGATGAAATTTGTTCTG--GGGAATATTGCTTGGATTCATTTTGATATGATACTTCAA 518420 |||| || |||| ||| | |||| | || || ||| | | | || |||| Sbjct 9322040 ATTGCAGATATTTCTTCAGCATTGAATTCTCGTTTTTCTC-CTTTCACTTCA-ACCTCAA 9322097 Query 518421 AATATGG--TTTATTACCAACATTAATAACTTTAAATGGCCAGTATTTCATATCTGATTG 518478 | || || || | || ||||| | |||||||| | ||| ||||| ||||| Sbjct 9322098 CAACGGGCTTTCCTTGTTTTCCTT--TAACTGTGAATGGCCAATGTTTAATATCAGATTG 9322155 Query 518479 AACACTTTGGTCATTAAAATCTCTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGT 518538 |||| ||| |||| || ||| ||||||| ||||||||||| |||| ||||| Sbjct 9322156 AACAGTTTCTTCATCGAATCGTCTTCCAATTAGACGTTTTGCATCGAAAACTGTATTCTC 9322215 Query 518539 TGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAA 518598 |||||| || ||||||| ||| |||||||| |||| || ||||| |||||||| Sbjct 9322216 CGGATTACGAGCGGCTTGATCTTTTGCTGCATCACCAACGAGTCTCTCTGTATCTGTAAA 9322275 Query 518599 TGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAAC 518652 | || || || || || || || |||| ||||| | |||||||| Sbjct 9322276 AGCCACGTAGGAAGGCGTAGTCTTGTTCCCTTCGGAGTTCGCGAGGATTTCAAC 9322329 >seq6 Length=17718942 Score = 100 bits (110), Expect = 2e-15 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 518523 CAAAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGAT 518582 |||||| ||| || ||| || || | | |||||| ||||| |||||||| || ||| Sbjct 3293494 CAAAAACAGTGTTATGTGGGTTCATGGTAACTTGATTCTTGGCAGCATCTCCGATGAGAA 3293435 Query 518583 GTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAA 518642 | || || | || || | ||||||||||||||||| || || |||||||| || |||| Sbjct 3293434 GCTCGGTGCCGGTGAAAGCCACATATGATGGAGTTGTACGGTTTCCTTGATCGTTGGCAA 3293375 Query 518643 TAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAA 518702 | ||||| || || || | | || | || || | | || ||||||||||| | Sbjct 3293374 TGATTTCTACCTTCCCGTGCATGAAAACTCTCACGCAGCAGTAGGTAGTTCCTAAATCGA 3293315 Query 518703 TACCAATAGC 518712 | |||||||| Sbjct 3293314 TTCCAATAGC 3293305 >seq4 Length=17493829 Score = 98.7 bits (108), Expect = 8e-15 Identities = 102/134 (76%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 518525 AAAATAGTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGT 518584 |||| ||| || ||| || || ||| |||||| ||||| |||||||| || ||| | Sbjct 17279166 AAAACAGTGTTATGTGGGTTCATGGCAACTTGATTCTTGGCAGCATCTCCGATGAGACGC 17279107 Query 518585 TCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATA 518644 || || || || || | ||||||||||||||||| || || |||||||| || ||||| Sbjct 17279106 TCGGTGTCGGTGAAAGCCACATATGATGGAGTTGTACGGTTTCCTTGATCGTTGGCAATG 17279047 Query 518645 ATTTCAACTTTACC 518658 ||||| || || || Sbjct 17279046 ATTTCTACCTTTCC 17279033 >seq5 Length=20924180 Score = 95.1 bits (104), Expect = 9e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 518168 TTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTA 518227 ||||| | ||||| || | ||| ||||||||||| || || || | | | ||| ||| Sbjct 4826054 TTATCCAATCCATAGGCGAGAGCGGCAGCAGTTGGCTCGTTGATGACACGAAGAACGTTA 4826113 Query 518228 AGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCA 518287 ||||||| ||| ||| ||||| ||||| ||||| | || |||||||| || || || Sbjct 4826114 AGACCAGAGATTTGTCCAGCATCCTTAGTAGCTTGACGCTGAGAATCGTTGAAGTAAGCT 4826173 Query 518288 GGAACAGTAATAACGGC 518304 ||||| |||| |||||| Sbjct 4826174 GGAACTGTAACAACGGC 4826190 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3780822052636942