Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq2 266 4e-66 seq4 250 3e-61 seq1 244 1e-59 seq6 161 1e-34 >seq2 Length=15279421 Score = 266 bits (294), Expect = 4e-66 Identities = 799/1214 (66%), Gaps = 31/1214 (3%) Strand=Plus/Plus Query 6664 GGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATC 6723 |||||| || | | ||||| ||||| ||||| | ||| ||||||||||||| ||| Sbjct 11757653 GGATTTTCCAGTTGATTTATCCTCAGCTGACACATTGAGAATTCCATTTGCATCAATATC 11757712 Query 6724 GAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAA 6783 || | || | ||||||||| ||| | || || | |||||| || | || || || Sbjct 11757713 AAAAGTGACTTCAATTTGTGGAACACCGCGTGGAGCAGGTGGAATTCCAGACAATTCGAA 11757772 Query 6784 TGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGT 6843 ||| ||||| | || || | | | ||||||||||||||| |||| ||||| Sbjct 11757773 TGTTCCAAGGCGATGATTGTCACGAGTCATTGCACGTTCACCTTCATACACTTGAATTGA 11757832 Query 6844 CACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTA-GATGGAATCG 6902 || | |||||||| || || | ||| ||| | | ||| | |||||| Sbjct 11757833 GACACCTGGTTGATTGTCAGCATATGTAGTGAATGTTT-TGCAGGCTTTTGTTGGAATTC 11757891 Query 6903 TCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACA 6962 || |||| ||| | |||||| | ||| || ||||| | |||||| || Sbjct 11757892 GAGTGTTTCGATCAATCAGATTGGTCATCACACCTCCAGCTGTTTCAATTCCAAGGCTCA 11757951 Query 6963 GAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCAC-CCGTTAAG 7021 || | || || | || |||| || | | | ||| | |||| || || ||| Sbjct 11757952 ATGGAGCAACATCAACCAGCAACACATCCTTGATTGTTTCAT--CCTTGACACCAGAAAG 11758009 Query 7022 -ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 | || ||||| || | || || |||| || || ||||| || || || | || Sbjct 11758010 TACAGCTGCTTGAACTGCAGCACCAAATGCAACTGCTTCATCTGGATTGATGGAGCAGTT 11758069 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 || ||| || || || || | || | || || |||||||||||| | || || || Sbjct 11758070 CAATTCCTTTCCATTGAAGAAGTCTTTCAGCAATTTTTGAATTTTCGGAACACGAGTGGA 11758129 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 ||| |||||||| || | ||||| | || ||||| || | || | |||||||| | Sbjct 11758130 TCCTCCGACCAACACAACTTCATCGATCTTTGATTTGTCAAGTTTAGCATCTCGAAGAGC 11758189 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 || || || ||||||| | ||| ||||| | || ||||||||| || ||||| || Sbjct 11758190 CTTCTCAACTGGTTCCAGAGTTTTCCGGAATAGATCAGCACACAGTTCTTCGAAACGAGC 11758249 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 ||| || || ||| | | ||||| || || | | ||||||| ||||| || Sbjct 11758250 ACGAGTGATCTTTGTGCATAGATCAATTCCTTCAAACAGTGAATCAACTTCAACACATGC 11758309 Query 7321 TTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACG 7377 || ||| ||| || | |||| ||| || || ||||| || ||||| | ||| || Sbjct 11758310 TT---CCGATGAACTTGAAAGTGTTCTCTTGGCACGTTCACAAGCAGTTCGGAGACGTCG 11758366 Query 7378 AAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTACGTTTAAACTC-TTCAGAG 7435 | ||| || || || ||||| || || | || || | ||| ||||| |||| | Sbjct 11758367 GATGGCTCGTGGATTGGGTGAAATGTCCTT-TCCGGTCTTCCTTTTGAACTCATTCATA- 11758424 Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495 |||||| |||| | || ||| || ||||| || || | || ||||| || || || Sbjct 11758425 AAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCCGAGATGGGTATCACCAGCAGTT 11758484 Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTT--AACAAC-GAAACATCAAACGTACCA 7552 | ||| ||||| || || ||||||| || || || ||||||||||| ||||| Sbjct 11758485 GATTTCACTTCGAATATCGATCCTTCAGCAATTGAAAGAATTGAAACATCAAATGTACCT 11758544 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTC--TTATCGAGACC 7608 || || || || || || | ||| ||| | || || ||| ||| ||||| | || Sbjct 11758545 CCTCCGAGATCGAAGATCAATACATTCTTCTCATC----TTGAATTCCTTTATCCAATCC 11758600 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 || || | ||| || || ||||||||||| ||||| |||| || || |||||||| Sbjct 11758601 ATATGCAAGAGCAGCAGCAGTTGGTTCATTGATAATTCGAATTGCATTGAGTCCAGCAAT 11758660 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 || || ||||| || || ||||| | || ||| || ||||| || || || || | Sbjct 11758661 GGTAGCTGCATCCTTTGTTGCTTGCCTCTGACTATCATTGAAGTATGCAGGAACTGTGAT 11758720 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCA--TTTTGGTA 7786 || || || | || | | |||||||| | || || | || |||| |||||| Sbjct 11758721 AACTGCATCTTTCACGGTATGTCCGAGATAAGTCTCAGCTGTTTCCTTCATCTTTTGG-- 11758778 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 || ||||| | || |||||||| | || || || |||| || || | |||||| Sbjct 11758779 AGTACCATTGCAGAGATCTCTTCTGGATTGAATTGCCTCTTTTCTCCTTTCACTTCAACT 11758838 Query 7847 TCAATCATGGGTTT 7860 ||||||| ||||| Sbjct 11758839 TCAATCACTGGTTT 11758852 Score = 266 bits (294), Expect = 4e-66 Identities = 799/1214 (66%), Gaps = 31/1214 (3%) Strand=Plus/Minus Query 6664 GGATTTACCCGAGGCCTTATCTTCAGCACTTACATTCAAAATACCATTTGCATCAACATC 6723 |||||| || | | ||||| ||||| ||||| | ||| ||||||||||||| ||| Sbjct 11761310 GGATTTTCCAGTTGATTTATCCTCAGCTGACACATTGAGAATTCCATTTGCATCAATATC 11761251 Query 6724 GAACCTTACATTAATTTGTGGTGTACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAA 6783 || | || | ||||||||| ||| | || || | |||||| || | || || || Sbjct 11761250 AAAAGTGACTTCAATTTGTGGAACACCGCGTGGAGCAGGTGGAATTCCAGACAATTCGAA 11761191 Query 6784 TGTACCAAGTAAACTGTTATCCGTCGCCTTCTTACGTTCACCTTCATAGACTTTAATTGT 6843 ||| ||||| | || || | | | ||||||||||||||| |||| ||||| Sbjct 11761190 TGTTCCAAGGCGATGATTGTCACGAGTCATTGCACGTTCACCTTCATACACTTGAATTGA 11761131 Query 6844 CACCGCAGGTTGATTATCTTGTGCCGTTGAGAAGATTTGTTCTTTCTTA-GATGGAATCG 6902 || | |||||||| || || | ||| ||| | | ||| | |||||| Sbjct 11761130 GACACCTGGTTGATTGTCAGCATATGTAGTGAATGTTT-TGCAGGCTTTTGTTGGAATTC 11761072 Query 6903 TCGTATTTCTCGGAATAACCGGGGTCATAATACCACCCATAGTTTCGAGTCCAAGAGACA 6962 || |||| ||| | |||||| | ||| || ||||| | |||||| || Sbjct 11761071 GAGTGTTTCGATCAATCAGATTGGTCATCACACCTCCAGCTGTTTCAATTCCAAGGCTCA 11761012 Query 6963 GAGGTGTCACGTCCAAGAGTAACAGGTCTTGAACAGATTCGTTCCCTTCAC-CCGTTAAG 7021 || | || || | || |||| || | | | ||| | |||| || || ||| Sbjct 11761011 ATGGAGCAACATCAACCAGCAACACATCCTTGATTGTTTCAT--CCTTGACACCAGAAAG 11760954 Query 7022 -ATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 | || ||||| || | || || |||| || || ||||| || || || | || Sbjct 11760953 TACAGCTGCTTGAACTGCAGCACCAAATGCAACTGCTTCATCTGGATTGATGGAGCAGTT 11760894 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACATTTGTTGAATTTTCGGGATTCGTGTCGA 7140 || ||| || || || || | || | || || |||||||||||| | || || || Sbjct 11760893 CAATTCCTTTCCATTGAAGAAGTCTTTCAGCAATTTTTGAATTTTCGGAACACGAGTGGA 11760834 Query 7141 TCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTGT 7200 ||| |||||||| || | ||||| | || ||||| || | || | |||||||| | Sbjct 11760833 TCCTCCGACCAACACAACTTCATCGATCTTTGATTTGTCAAGTTTAGCATCTCGAAGAGC 11760774 Query 7201 TTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTGC 7260 || || || ||||||| | ||| ||||| | || ||||||||| || ||||| || Sbjct 11760773 CTTCTCAACTGGTTCCAGAGTTTTCCGGAATAGATCAGCACACAGTTCTTCGAAACGAGC 11760714 Query 7261 ACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTGT 7320 ||| || || ||| | | ||||| || || | | ||||||| ||||| || Sbjct 11760713 ACGAGTGATCTTTGTGCATAGATCAATTCCTTCAAACAGTGAATCAACTTCAACACATGC 11760654 Query 7321 TTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACG 7377 || ||| ||| || | |||| ||| || || ||||| || ||||| | ||| || Sbjct 11760653 TT---CCGATGAACTTGAAAGTGTTCTCTTGGCACGTTCACAAGCAGTTCGGAGACGTCG 11760597 Query 7378 AAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT-TTACGTTTAAACTC-TTCAGAG 7435 | ||| || || || ||||| || || | || || | ||| ||||| |||| | Sbjct 11760596 GATGGCTCGTGGATTGGGTGAAATGTCCTT-TCCGGTCTTCCTTTTGAACTCATTCATA- 11760539 Query 7436 AAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTC 7495 |||||| |||| | || ||| || ||||| || || | || ||||| || || || Sbjct 11760538 AAGTGTTGAAGCATTCGTTGATCAAAGTCTTCTCCTCCGAGATGGGTATCACCAGCAGTT 11760479 Query 7496 GCTTTGACTTCAAAGATACCTCCTTCAATGTTT--AACAAC-GAAACATCAAACGTACCA 7552 | ||| ||||| || || ||||||| || || || ||||||||||| ||||| Sbjct 11760478 GATTTCACTTCGAATATCGATCCTTCAGCAATTGAAAGAATTGAAACATCAAATGTACCT 11760419 Query 7553 CCACCCAGGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTG--TTC--TTATCGAGACC 7608 || || || || || || | ||| ||| | || || ||| ||| ||||| | || Sbjct 11760418 CCTCCGAGATCGAAGATCAATACATTCTTCTCATC----TTGAATTCCTTTATCCAATCC 11760363 Query 7609 GTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAAT 7668 || || | ||| || || ||||||||||| ||||| |||| || || |||||||| Sbjct 11760362 ATATGCAAGAGCAGCAGCAGTTGGTTCATTGATAATTCGAATTGCATTGAGTCCAGCAAT 11760303 Query 7669 AGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTAC 7728 || || ||||| || || ||||| | || ||| || ||||| || || || || | Sbjct 11760302 GGTAGCTGCATCCTTTGTTGCTTGCCTCTGACTATCATTGAAGTATGCAGGAACTGTGAT 11760243 Query 7729 GACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT--TTTGGTA 7786 || || || | || | | |||||||| | || || | || ||||| ||||| Sbjct 11760242 AACTGCATCTTTCACGGTATGTCCGAGATAAGTCTCAGCTGTTTCCTTCATCTTTTGG-- 11760185 Query 7787 AGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAAATCAACT 7846 || ||||| | || |||||||| | || || || |||| || || | |||||| Sbjct 11760184 AGTACCATTGCAGAGATCTCTTCTGGATTGAATTGCCTCTTTTCTCCTTTCACTTCAACT 11760125 Query 7847 TCAATCATGGGTTT 7860 ||||||| ||||| Sbjct 11760124 TCAATCACTGGTTT 11760111 Score = 138 bits (152), Expect = 1e-27 Identities = 258/376 (69%), Gaps = 5/376 (1%) Strand=Plus/Plus Query 7456 ATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACC 7515 |||||||||||| || ||||| || ||||| || || || || || || | || Sbjct 7351595 ATCGAAATCTTCTCCTCCCAAATGGGTATCTCCATTAGTGGCAAGAACCTCGAAAACTCC 7351654 Query 7516 TCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTAC 7575 | || ||| | | | || ||||| || || ||||| |||| || || | || | Sbjct 7351655 GCTGTCGATGGTAAGAAGGGATACATCGAAAGTTCCACCTCCCAAATCGAAGACAAGAAT 7351714 Query 7576 GTT-CGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 ||| ||| || | ||||| |||||| | || || ||||| || ||||| ||||||| Sbjct 7351715 GTTGCGT-TCTCCATCTTT---CTTATCCAATCCATAAGCGATGGCTGCCGCTGTTGGTT 7351770 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 | || || || | | | ||| || || ||||||| | | ||||| || || |||||| Sbjct 7351771 CGTTGATGATTCTCACAACGTTAAGTCCGGCAATAGATCCTGCATCCTTGGTGGCTTGTT 7351830 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGA 7754 ||| | ||| || ||||| || || || || || || |||| | | || | | ||| | Sbjct 7351831 TTTGAGCATCATTGAAGTATGCTGGCACGGTGACAACGGCGTTCTTCACCTCGTGACCAA 7351890 Query 7755 GATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCG 7814 | || ||||| || || | ||||| || ||||||||||| | || | ||||||| | Sbjct 7351891 GGTAGGATTCGGCAATCTGCTTCATCTTCGTAAGAACCATGGCAGAGACTTCTTCAGGAG 7351950 Query 7815 CAAACTGTTTCGTTTC 7830 || |||||||| || Sbjct 7351951 TGAATTGTTTCGTCTC 7351966 >seq4 Length=17493829 Score = 250 bits (276), Expect = 3e-61 Identities = 496/727 (68%), Gaps = 8/727 (1%) Strand=Plus/Minus Query 7241 CACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAAC 7300 || || ||||| ||||| ||||| || ||| || ||||| |||| || ||| | | Sbjct 17279934 CAGAGCTCCTCGAAACGAGCACGAGTGATGTTGGTGTAGAAGTCAATTCCCTCGAAGAGA 17279875 Query 7301 GAATCAATTTCAATGGTTGTTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACAC 7360 ||||| || ||||| | | || | | ||| || | |||| |||||||||||| || Sbjct 17279874 GAATCGATCTCAATTGAAGCCTGGGAAGACGACGAAAGAGTTCTCTTTGCGCGCTCGCAG 17279815 Query 7361 GCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGT 7420 || || || | ||||||||| ||||| ||||| | || ||| ||||| || || || Sbjct 17279814 GCGGTACGAAGACGACGAAGAGCACGTGGGTTGGAAGCAAGATCCTTCTTGTGCTTGCGC 17279755 Query 7421 TTAAACTCTTCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGT 7480 || ||||| || ||||||| | | | |||||| || || || || | || Sbjct 17279754 TTGAACTCGGCACAGAAGTGGTTCACCATGCGGTTATCGAAGTCCTCTCCTCCAAGATGA 17279695 Query 7481 GTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACA 7540 || || || ||||| | |||||||| ||||| || | |||||| | | | || ||| Sbjct 17279694 GTGTCTCCAGCGGTAGACTTGACTTCGAAGATTCCGTCCTCAATGGTAAGAATGGAGACA 17279635 Query 7541 TCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTT-CGTATCGTCGTCTTTGTTCTT 7599 || || |||||||| || || || || || || ||||| ||| || ||| | ||||| Sbjct 17279634 TCGAAGGTACCACCTCCAAGATCGAAGATAAGAACGTTGCGT-TCTCCGTGTCCCTTCTT 17279576 Query 7600 ATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAG 7659 || || ||||| |||||||| || || ||||| || || || ||||| ||| ||| || Sbjct 17279575 GTCAAGTCCGTAAGCGATAGCTGCAGCGGTTGGCTCGTTGATGATACGGAGAACGTTGAG 17279516 Query 7660 GCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGG 7719 ||||| || | | | ||||| || || ||||| || ||||| ||||| ||||| || || Sbjct 17279515 TCCAGCGATGGCTCCGGCATCCTTGGTGGCTTGACGCTGCGAGTCGTTGAAGTAAGCTGG 17279456 Query 7720 GACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCAT 7779 ||| || || || || ||| |||| | | || || | | || || | || ||||| Sbjct 17279455 GACAGTGACAACGGCATCCTTGACGGTGGTTCCAAGGAAAGCCTCGGCAGTCTCCTTCAT 17279396 Query 7780 TTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCGTTAAA 7839 || | |||||| || || |||||||| | | || || | || || || | Sbjct 17279395 CTTCAGCAAAACCATTGAGGAGATCTCTTCTGGAGTGAAGATCTTGTTCTCTCCTTTGTA 17279336 Query 7840 ATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCAATCTTT 7899 ||||||| | | | || ||| | | | | | ||| ||||| | | ||||| || Sbjct 17279335 CTCAACTTGGACCTTTGGCTTAGCTCCTTCGGCAGAGATGACCTTGAATGGCCAATGCTT 17279276 Query 7900 CATATC-GTCTTGGACCTGTTGG-TCCGAAAACTTTCTTCCGATAAGACGCTTTGCATC- 7956 ||| || | || || ||| ||| || ||||| | ||| |||||||| || ||||| Sbjct 17279275 CATGTCAGACT--GAACTGCTGGATCGTCGAACTTGCGTCCAATAAGACGTTTGGCATCT 17279218 Query 7957 -AAAAAC 7962 |||||| Sbjct 17279217 GAAAAAC 17279211 Score = 120 bits (132), Expect = 4e-22 Identities = 388/597 (65%), Gaps = 4/597 (1%) Strand=Plus/Minus Query 6569 TCATCTTCATCTTTATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGAT 6628 ||||| ||| | || || || || || || | |||||| ||||||||| || || || Sbjct 17280800 TCATCGTCAGCCTTGTATTTCTCAGCTTCGTTGACCATGCGTTCAATGTCATCCTTGGAA 17280741 Query 6629 AATCTCCCCTTATCATTCGTAATCGTAATCTT-TTCGGATTTACCCGAGGCCTTATCTTC 6687 | | ||||| || || || || || ||||| || | ||| || | || ||| || Sbjct 17280740 AGACGTCCCTTGTCGTTGGTGATGGTGATCTTGTTTTGCTTT-CCGGTGGACTTGTCAGT 17280682 Query 6688 AGCACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGT 6747 ||| || ||||| || || || || |||| |||||| | || | |||||||| Sbjct 17280681 GGCAGAGACGTTCAAGATTCCGTTGGCGTCAATATCGAAAGTGACTTCGATTTGTGGGAC 17280622 Query 6748 ACCCCTCGGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGT 6807 || | ||||| | ||| || || | | || || | || || || |||| ||| | Sbjct 17280621 TCCGCGTGGTGCTGGTGGGATTCCGGAGAGCTCGAACTTTCCGAGCAAGTTGTTGTCCTT 17280562 Query 6808 CGCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCTTGTGC 6867 | | | |||||| ||||| || || | || ||| | ||||| ||||| Sbjct 17280561 GGTCATGGCACGTTCTCCTTCGTAAACCTGGATCAACACTCCTGGTTGGTTATCAGAATA 17280502 Query 6868 CGTTGAGAAGATTTGTTCTTTCTTAGATGGAATCGTCGTATTTCTCGGAATAACCGGGGT 6927 |||| |||| | || | |||| | ||| || || || |||||| || | | || Sbjct 17280501 GGTTGTGAAGGTCTGAGCGGTCTTGGTTGGGATGGTGGTGTTTCTCTTGATGAGAGCAGT 17280442 Query 6928 CATAATACCACCCATAGTTTCGAGTCCAAGAGACAGAGGTGTCACGTCCAAGAGTAACAG 6987 ||| | || || || || | ||||| || || || | ||||| | || | || Sbjct 17280441 CATGACTCCTCCAGCGGTCTCAATACCAAGGGAAAGTGGGGCAACGTCAAGAAGAAGAAG 17280382 Query 6988 GTCTTGAACAGATTCGTTCCCTTCACCCGTTAAGATGGCGGCTTGGACCGTCGCCCCGTA 7047 || || |||| || | || || | | ||| ||||||||||| | || ||||| Sbjct 17280381 ATCCTGGACAGCCTCAGACTTGTCTCCGGAGAGGATAGCGGCTTGGACGGCAGCTCCGTA 17280322 Query 7048 TGCGACCGCCTCATCGGGGTTAATCGTTTTATTCAGTTCTTTACCGTTAAAATA-ATCCG 7106 || || |||||||| ||||| || | || |||| ||| || || | | || | ||| | Sbjct 17280321 GGCAACGGCCTCATCTGGGTTGATGGACTTGTTCAATTCCTTTCC-TGAGAAGAGATCGG 17280263 Query 7107 ATAACATTTGTTGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCAT 7163 | || | || || | || ||||| || || ||||| ||||| | ||||| |||| Sbjct 17280262 ACAAAAGTTTCTGGACCTTTGGGATACGAGTGGATCCTCCGACAAGGACGATGTCAT 17280206 Score = 84.2 bits (92), Expect = 3e-11 Identities = 130/185 (70%), Gaps = 3/185 (2%) Strand=Plus/Minus Query 7958 AAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGT 8017 ||||| ||||| | ||||||||||| ||| ||||| || || || ||||| ||||| Sbjct 17279166 AAAACAGTGTTATGTGGGTTCATGGCAACTTGATTCTTGGCAGCATCTCCGATGAGACGC 17279107 Query 8018 TCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCA 8077 || | || || || || || || ||||| || || || || ||||| ||||| ||| Sbjct 17279106 TC---GGTGTCGGTGAAAGCCACATATGATGGAGTTGTACGGTTTCCTTGATCGTTGGCA 17279050 Query 8078 ATAATTTCTACGCGGTCGTTTTGCCAGACGCCGACGCACGAATACGTTGTTCCTAAATCA 8137 || |||||||| ||| | || || ||||| || || || ||||| ||||| Sbjct 17279049 ATGATTTCTACCTTTCCGTGCATGAAAACTCCCACGCAGGAGTAGGTAGTTCCCAAATCG 17278990 Query 8138 ATACC 8142 || || Sbjct 17278989 ATTCC 17278985 >seq1 Length=15072434 Score = 244 bits (270), Expect = 1e-59 Identities = 650/980 (66%), Gaps = 21/980 (2%) Strand=Plus/Plus Query 7118 TGAATTTTCGGGATTCGTGTCGATCCACCGACCAAAACGATTTCATTCACTTTCGATTTA 7177 ||||| ||||| || || || ||||| || ||||| || | ||||| | | | |||| Sbjct 9321362 TGAATCTTCGGTATACGAGTTGATCCCCCAACCAAGACAACTTCATCGATTCTGCCTTTA 9321421 Query 7178 TCGATCTTTGAGTCTCGAAGTGTTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCC 7237 || | |||| || ||||||| ||||| || || |||| | || ||||| | || Sbjct 9321422 TCAGTTTTTGCATCACGAAGTGCCTTTTCAACCGGCTCCAAAGTCTTGCGGAAAAGATCA 9321481 Query 7238 ATACACAGTTCCTCAAAACGTGCACGGGTAATGGATGTATAGAAATCAACGCCGTCGTAT 7297 ||| || || || || | |||||| || || | |||||||||| || || || Sbjct 9321482 GCACAGAGCTCTTCGAATCTTGCACGTGTGATTTTCGAATAGAAATCAGTTCCATCAAAT 9321541 Query 7298 AACGAATCAATTTCAATGGTTGTTTGTGCCGTCGAA---GATAACGTTCGCTTTGCGCGC 7354 |||||||| | || | |||| || | || ||| || | || ||||| || || Sbjct 9321542 AACGAATCGACCTCTACAGTTGCTT---CAGTGGAACTGGAAAGAGTACGCTTAGCACGT 9321598 Query 7355 TCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAAATATCTTTCTTATGT 7414 ||||| |||||||| | |||||||| || || || || ||||||||||| | | Sbjct 9321599 TCACATGCCGTTCGGAGACGACGAATTGCGCGGGGATTTGATGAAATATCTTTTCCAGTT 9321658 Query 7415 TTACGTTTAAACTCT-TCAGAGAAGTGTCGAAGGAGTCTCGAATCGAAATCTTCACCACC 7473 || | ||| || || ||| | || ||| | || | || ||||| || ||||| || || Sbjct 9321659 TTTCTTTTGAATTCGGTCATAAAA-TGTTGTAGAACTCGAGAATCAAAGTCTTCTCCTCC 9321717 Query 7474 CAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCTCCTTC---AATGTTTAA 7530 | || ||||| || || || | |||||||| || ||| |||||| ||| | Sbjct 9321718 AAGATGAGTATCTCCTGCAGTTGACTTGACTTCGAAAATAGATCCTTCCGCAATCGAAAG 9321777 Query 7531 CAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACGTTCGTATCGTC-GT 7589 | ||| |||||||| ||||| || |||| || ||||| | | ||| | || || || Sbjct 9321778 GATCGAGACATCAAATGTACCTCCTCCCAAATCGAAAATCAAAATATTCTTCTCATCAGT 9321837 Query 7590 CTTTGTTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAA 7649 || | |||||||| || || || | ||| ||||||||||||||||| |||||||||| Sbjct 9321838 AATTCCT-TTATCGAGTCCATAGGCCAAAGCTGCCGCCGTTGGTTCATTGATAATACGAA 9321896 Query 7650 GACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAA 7709 || || ||||||||||| || |||||||| ||||| || | || ||| |||| Sbjct 9321897 TTGCATTGAGTCCAGCAATAGTAGCTGCATCTTTGGTCGCCTGCCTCTGGCTATCATTAA 9321956 Query 7710 AGTAGGCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATAC-GATTCCGCG 7768 | || || || || || | ||| || ||| || | || || ||| | ||| || Sbjct 9321957 AATATGCAGGCACAGTAATGACAGCATCCCGTACAGAATGCCCAAG-TACAGCTTCAGCC 9322015 Query 7769 ATATCTTTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTT 7828 | |||||||| || ||| ||||| | || || |||||||| || | | || Sbjct 9322016 GTTTCTTTCATCTTCTGAAGTACCATTGCAGATATTTCTTCAGCATTGAATTCTCGTTTT 9322075 Query 7829 TCACCGTTAAAATCAACTTCAATCATGGGTTTATCCGCAGCACCGGGGATAACCTTATAC 7888 || || || | ||||| |||| | ||| || ||| | |||| | | Sbjct 9322076 TCTCCTTTCACTTCAACCTCAACAACGGGCTT-TCCTTGTTTTC--CTTTAACTGTGAAT 9322132 Query 7889 GACCAATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGC 7948 | ||||| ||| ||||| ||| || || || || |||||| || ||||| Sbjct 9322133 GGCCAATGTTTAATATCAGATTGAACAGTTTCTTCATCGAATCGTCTTCCAATTAGACGT 9322192 Query 7949 TTTGCATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCG 8008 |||||||| |||||||| || | || || || | ||| | || || || || || Sbjct 9322193 TTTGCATCGAAAACTGTATTCTCCGGATTACGAGCGGCTTGATCTTTTGCTGCATCACCA 9322252 Query 8009 ATAAGACGTTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGG 8068 | || | || || || ||||| || ||||| || || || || ||||||| | Sbjct 9322253 ACGAGTCTCTCTGTA---TCTGTAAAAGCCACGTAGGAAGGCGTAGTCTTGTTCCCTTCG 9322309 Query 8069 TCGTTCGCAATAATTTCTAC 8088 |||||| | ||||| || Sbjct 9322310 GAGTTCGCGAGGATTTCAAC 9322329 Score = 107 bits (118), Expect = 2e-18 Identities = 203/294 (69%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 6572 TCTTCATCTTT-ATACTTTTCCGCATCTTGGACCATCTTTTCAATGTCTTCTTTCGATAA 6630 ||||| ||||| | ||| || || || | |||||| | ||||| || ||| || | Sbjct 9320755 TCTTC-TCTTTCAAACTGTTTTGCTTCATTGACCATTCTATCAATATCAGCTTGAGAGAG 9320813 Query 6631 TCTCCCCTTATCATTCGTAATCGTAATCTTTTCGGATTTACCCGAGGCCTTATCTTCAGC 6690 || ||||| ||||| ||| ||||| | | ||| |||| | | ||||| |||| Sbjct 9320814 TCGTCCCTTCTCATTGCGAATTGTAATTCTGTTTGATCTACCAGTTGATTTATCGGCAGC 9320873 Query 6691 ACTTACATTCAAAATACCATTTGCATCAACATCGAACCTTACATTAATTTGTGGTGTACC 6750 |||||| | ||| ||||||||||||| ||| ||| |||||| | ||||| | || Sbjct 9320874 TGATACATTGAGAATTCCATTTGCATCAATATCAAACGTTACATCGACTTGTG--GAACT 9320931 Query 6751 CCTC--GGTGCGGCTGGAATACCCGTTAAATCAAATGTACCAAGTAAACTGTTATCCGTC 6808 |||| || || | ||| || || ||||| |||||||| ||||| | ||||| Sbjct 9320932 CCTCGTGGAGCTGGTGGGATTCCAGTTAATTCAAATGTTCCAAGACGATGATTATCTCGA 9320991 Query 6809 GCCTTCTTACGTTCACCTTCATAGACTTTAATTGTCACCGCAGGTTGATTATCT 6862 | | | |||||| ||||| || |||| ||| | || |||| ||||| ||| Sbjct 9320992 GTCATAGCACGTTCTCCTTCGTATACTTGAATAGAGACACCAGGCTGATTGTCT 9321045 >seq6 Length=17718942 Score = 161 bits (178), Expect = 1e-34 Identities = 322/475 (68%), Gaps = 8/475 (2%) Strand=Plus/Plus Query 7595 TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAG 7654 ||||| || || ||||| ||||| || || || ||||| || || || ||||||| | | Sbjct 6091062 TTCTTGTCAAGTCCGTAGGCGATGGCGGCGGCGGTTGGCTCGTTGATGATACGAACAACG 6091121 Query 7655 TTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAG 7714 |||| ||||| || ||| | ||||| || || ||||| ||||| | ||||| || || Sbjct 6091122 TTCAATCCAGCGATGGTTCCGGCATCCTTGGTAGCTTGACGTTGGGCGTCGTTGAAATAA 6091181 Query 7715 GCCGGGACCGTTACGACCGCGTCCGTGACTTTCTTACCGAGATACGATTCCGCGATATCT 7774 || ||||| || ||||| |||| | |||||| ||| || || || || || ||||| || Sbjct 6091182 GCTGGGACAGTGACGACGGCGTTCTTGACTTCCTTTCCAAGGTAGGACTCGGCGATCTCC 6091241 Query 7775 TTCATTTTGGTAAGAACCATCGATGAAATCTCTTCAGCCGCAAACTGTTTCGTTTCACCG 7834 ||||| ||| |||||||| | |||| ||||| | | || || || | || Sbjct 6091242 TTCATCTTGACGAGAACCATAGCGGAAACTTCTTCTGGGGTGAATTGCTTGTTGTCGGAT 6091301 Query 7835 TTAAAATCAACTTCAATC-ATGGGTTTATCCGCAGCACCGGGGATAACCTTATACGACCA 7893 || | ||||| | |||| || | | | | |||||||| | | ||| Sbjct 6091302 CCAACCTTGACTTCGACGGATGGCTTGTTGCTCTTGTCA----ATAACCTTGAATGGCCA 6091357 Query 7894 ATCTTTCATATCGTCTTGGACCTGTTGGTCCGAAAACTTTCTTCCGATAAGACGCTTTGC 7953 | || || || |||| || | ||| | | |||||||||||||||||| || Sbjct 6091358 GTGCTTGATGTCAGCTTGAACAGTCTTGTCGTTGTAATCTCTTCCGATAAGACGCTTGGC 6091417 Query 7954 ATCAAAAACTGTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAG 8013 |||||| | |||||||| ||||| |||| || ||||| || || || ||||| || Sbjct 6091418 ATCAAAGATTGTGTTTTCTGGGTTGATGGTGAGCTGATTCTTAGCAGCATCTCCGATCAG 6091477 Query 8014 ACG---TTCATTATTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCT 8065 ||| | | | || | | | || || ||||| |||||||| | || || ||| Sbjct 6091478 ACGATCTCCTTGATCTCCAGAGAAAGCAACGTAGGATGGGGTGATACGGTTTCCT 6091532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635132744425880