Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_017940.1 Length=127732 Score E Sequences producing significant alignments: (Bits) Value seq1 82.4 6e-11 >seq1 Length=15072434 Score = 82.4 bits (90), Expect = 6e-11 Identities = 86/113 (76%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 29956 TGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTGACACATGGTGTGGCAC 30015 ||||| |||||||||||||||||||| | | ||| || ||||||||||| ||||| ||| Sbjct 5138951 TGGTAAAGCTGACACGAGAGCTCTCCATTGTCCACATAGAACTGACACATTGTGTGACAC 5138892 Query 30016 GGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCGCACACGATGAT 30068 || || ||| |||| | || | || || ||||| ||| ||| ||||| Sbjct 5138891 GGTGGCAGAACCATTTGTCCAAGATCCGACGGATTCCACGCGGACATAATGAT 5138839 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408617565139811