Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq2 279 3e-69 seq1 132 3e-25 seq3 114 8e-20 seq6 107 1e-17 seq4 104 2e-16 >seq2 Length=15279421 Score = 279 bits (308), Expect = 3e-69 Identities = 563/826 (68%), Gaps = 12/826 (1%) Strand=Plus/Minus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGT 475424 |||| ||||| ||| | ||||| || || ||||| |||||| | || | | ||| Sbjct 11758485 CAACTGCTGGTGATACCCATCTCGGAGGAGAAGACTTTGATCAACGAATGCT-TCAACAC 11758427 Query 475425 GTGTTGAA-GATTTCAAGAGGAAAAAT--AAAGTTGATCTTTCAACATCTGCTAAAGCAT 475481 | |||| || ||||| ||||| | |||| || ||||| | | | ||| Sbjct 11758426 TTTATGAATGAGTTCAAAAGGAAGACCGGAAAG--GACATTTCACCCAATCCACGAGCCA 11758369 Query 475482 TAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAA 475541 | ||||||| ||||||||||||||||||| ||| || | ||||| | | | || Sbjct 11758368 TCCGACGTCTCCGAACTGCTTGTGAACGTGCCAAGAGAACACTTTCAAGTTCATCGGAAG 11758309 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGAT-TATAATACTCTTATTACAAGG 475600 | ||||||||||||||| || ||||||||||||||| ||| || || || | Sbjct 11758308 CATGTGTTGAAGTTGATTCACTGTTTGAAGGAATTGATCTATGC-ACAAAGATCACTCGT 11758250 Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 ||| || ||||| | ||| ||||||| || | ||||| | ||||| ||||| | Sbjct 11758249 GCTCGTTTCGAAGAACTGTGTGCTGATCTATTCCGGAAAACTCTGGAACCAGTTGAGAAG 11758190 Query 475661 GTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 | ||| ||||| ||||||||||||||||| | || ||||| |||| | || ||||| Sbjct 11758189 GCTCTTCGAGATGCTAAACTTGACAAATCAAAGATCGATGAAGTTGTGTTGGTCGGAGGA 11758130 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTA 475780 || || | |||| ||||| | || |||| | | || ||||| || | || Sbjct 11758129 TCCACTCGTGTTCCGAAAATTCAAAAATTGCTGAAAGACTTCTTCAATGGAAAGGAATTG 11758070 Query 475781 AATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT 475840 || | ||||| |||||||| ||||||| ||| ||||| || ||||||||| | Sbjct 11758069 AACTGCTCCATCAATCCAGATGAAGCAGTTGCATTTGGTGCTGCAGTTCAAGCAGCTGTA 11758010 Query 475841 TTATCAGGTCAATCA--GACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCAC 475898 | || ||| ||| || || | | | || || | | || ||||| || ||||| Sbjct 11758009 CTTTCTGGTG--TCAAGGATGAAACAATCAAGGATGTGTTGCTGGTTGATGTTGCTCCAT 11757952 Query 475899 TTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTC 475958 | | || ||||||||| |||||| | ||||| ||||| ||||| |||| |||| Sbjct 11757951 TGAGCCTTGGAATTGAAACAGCTGGAGGTGTGATGACCAATCTGATTGATCGAAACACTC 11757892 Query 475959 CTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018 || ||| ||| | ||| ||| | || ||| |||| |||||| || ||| Sbjct 11757891 GAATTCCAACAAAAGCCTGCAAAACATTCACTACATATGCTGACAATCAACCAGGTGTCT 11757832 Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTT 476078 | || ||| | | |||||||||| | | | ||| || ||| | |||||||| | Sbjct 11757831 CAATTCAAGTGTATGAAGGTGAACGTGCAATGACTCGTGACAATCATCGCCTTGGAACAT 11757772 Query 476079 TTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTG 476138 | | | || ||||| |||||||| | || ||||| ||||||||||| ||||||| Sbjct 11757771 TCGAATTGTCTGGAATTCCACCTGCTCCACGCGGTGTTCCACAAATTGAAGTCACTTTTG 11757712 Query 476139 ATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||||||||||| ||||| ||||| | ||| |||||||| Sbjct 11757711 ATATTGATGCAAATGGAATTCTCAATGTGTCAGCTGAGGATAAATC 11757666 Score = 279 bits (308), Expect = 3e-69 Identities = 563/826 (68%), Gaps = 12/826 (1%) Strand=Plus/Plus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGT 475424 |||| ||||| ||| | ||||| || || ||||| |||||| | || | | ||| Sbjct 11760478 CAACTGCTGGTGATACCCATCTCGGAGGAGAAGACTTTGATCAACGAATGCT-TCAACAC 11760536 Query 475425 GTGTTGAA-GATTTCAAGAGGAAAAAT--AAAGTTGATCTTTCAACATCTGCTAAAGCAT 475481 | |||| || ||||| ||||| | |||| || ||||| | | | ||| Sbjct 11760537 TTTATGAATGAGTTCAAAAGGAAGACCGGAAAG--GACATTTCACCCAATCCACGAGCCA 11760594 Query 475482 TAAGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAA 475541 | ||||||| ||||||||||||||||||| ||| || | ||||| | | | || Sbjct 11760595 TCCGACGTCTCCGAACTGCTTGTGAACGTGCCAAGAGAACACTTTCAAGTTCATCGGAAG 11760654 Query 475542 CTACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGAT-TATAATACTCTTATTACAAGG 475600 | ||||||||||||||| || ||||||||||||||| ||| || || || | Sbjct 11760655 CATGTGTTGAAGTTGATTCACTGTTTGAAGGAATTGATCTATGC-ACAAAGATCACTCGT 11760713 Query 475601 GCTAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAA 475660 ||| || ||||| | ||| ||||||| || | ||||| | ||||| ||||| | Sbjct 11760714 GCTCGTTTCGAAGAACTGTGTGCTGATCTATTCCGGAAAACTCTGGAACCAGTTGAGAAG 11760773 Query 475661 GTTCTCAGAGATTCTAAACTTGACAAATCACAAGTCCATGAAATTGTTCTTGTAGGAGGT 475720 | ||| ||||| ||||||||||||||||| | || ||||| |||| | || ||||| Sbjct 11760774 GCTCTTCGAGATGCTAAACTTGACAAATCAAAGATCGATGAAGTTGTGTTGGTCGGAGGA 11760833 Query 475721 TCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATATTTTAATGGTAAAAAGTTA 475780 || || | |||| ||||| | || |||| | | || ||||| || | || Sbjct 11760834 TCCACTCGTGTTCCGAAAATTCAAAAATTGCTGAAAGACTTCTTCAATGGAAAGGAATTG 11760893 Query 475781 AATGAAAGTGTAAATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATT 475840 || | ||||| |||||||| ||||||| ||| ||||| || ||||||||| | Sbjct 11760894 AACTGCTCCATCAATCCAGATGAAGCAGTTGCATTTGGTGCTGCAGTTCAAGCAGCTGTA 11760953 Query 475841 TTATCAGGTCAATCA--GACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCAC 475898 | || ||| ||| || || | | | || || | | || ||||| || ||||| Sbjct 11760954 CTTTCTGGTG--TCAAGGATGAAACAATCAAGGATGTGTTGCTGGTTGATGTTGCTCCAT 11761011 Query 475899 TTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTC 475958 | | || ||||||||| |||||| | ||||| ||||| ||||| |||| |||| Sbjct 11761012 TGAGCCTTGGAATTGAAACAGCTGGAGGTGTGATGACCAATCTGATTGATCGAAACACTC 11761071 Query 475959 CTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018 || ||| ||| | ||| ||| | || ||| |||| |||||| || ||| Sbjct 11761072 GAATTCCAACAAAAGCCTGCAAAACATTCACTACATATGCTGACAATCAACCAGGTGTCT 11761131 Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTT 476078 | || ||| | | |||||||||| | | | ||| || ||| | |||||||| | Sbjct 11761132 CAATTCAAGTGTATGAAGGTGAACGTGCAATGACTCGTGACAATCATCGCCTTGGAACAT 11761191 Query 476079 TTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTG 476138 | | | || ||||| |||||||| | || ||||| ||||||||||| ||||||| Sbjct 11761192 TCGAATTGTCTGGAATTCCACCTGCTCCACGCGGTGTTCCACAAATTGAAGTCACTTTTG 11761251 Query 476139 ATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||||||||||||||| ||||| ||||| | ||| |||||||| Sbjct 11761252 ATATTGATGCAAATGGAATTCTCAATGTGTCAGCTGAGGATAAATC 11761297 Score = 172 bits (190), Expect = 4e-37 Identities = 352/514 (68%), Gaps = 12/514 (2%) Strand=Plus/Minus Query 474411 AAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAG 474470 |||| |||| ||||| |||||||| || | || || || || ||| | |||||| Sbjct 11759052 AAGGAAATAAGACAACTCCATCATACGTGGCATTCACAGATACGGAAAGATTGGTTGGAG 11758993 Query 474471 ATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGAT 474530 |||| || ||| ||||||| || |||||| | ||||| | |||||||| ||||||| Sbjct 11758992 ATGCAGCAAAAGATCAAGCAGCTCGTAATCCAGAGAATACAGTATTTGATGCAAAAAGAT 11758933 Query 474531 TGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA-TATGCGTCATTGGCCTTTT 474589 ||||||| || ||| ||||| | || || ||||| || | | | |||||||| ||| Sbjct 11758932 TGATTGGACGACGTTTCGATGAATCAACAGTTCAATCAGACTGTAAG-CATTGGCCATTT 11758874 Query 474590 AAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAAA 474649 |||| | || |||||| || |||| | ||| |||| | Sbjct 11758873 GGAGTGAAAGGAAAACAAGGAAAACCAGTGATTGAAGTTGAAGTGAAAGGAGAAAAGAGG 11758814 Query 474650 CAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAA--TGAAACAAACCGC-G 474706 ||||| || ||| | || ||| ||||||| | |||||| |||| |||| || | Sbjct 11758813 CAATTCAATCCAGAAGAGATCTCTGCAATGGTACT--CCAAAAGATGAAGGAAACAGCTG 11758756 Query 474707 AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAAT 474766 || | ||||| ||||| || | |||||||| || || ||||| ||||| || ||| Sbjct 11758755 AGA-CTTATCTCGGACATACCGTGAAAGATGCAGTTATCACAGTTCCTGCATACTTCAAT 11758697 Query 474767 GATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGT 474826 ||| ||| | |||||||| || ||||| | | ||||| || || |||| | || Sbjct 11758696 GATAGTCAGAGGCAAGCAACAAAGGATGCAGCTACCATTGCTGGACTCAATGCAATTCGA 11758637 Query 474827 ATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA--GAATTCTGACA 474884 ||||| ||||||||||| || || || ||||| ||||| | ||||| |||||| Sbjct 11758636 ATTATCAATGAACCAACTGCTGCTGCTCTTGCATATGGATTGGATAAAGGAATTCAAGAT 11758577 Query 474885 AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 ||||| ||||| || ||||| ||| ||||| Sbjct 11758576 GAGAAG--AATGTATTGATCTTCGATCTCGGAGG 11758545 Score = 172 bits (190), Expect = 4e-37 Identities = 352/514 (68%), Gaps = 12/514 (2%) Strand=Plus/Plus Query 474411 AAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAG 474470 |||| |||| ||||| |||||||| || | || || || || ||| | |||||| Sbjct 11759911 AAGGAAATAAGACAACTCCATCATACGTGGCATTCACAGATACGGAAAGATTGGTTGGAG 11759970 Query 474471 ATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGAT 474530 |||| || ||| ||||||| || |||||| | ||||| | |||||||| ||||||| Sbjct 11759971 ATGCAGCAAAAGATCAAGCAGCTCGTAATCCAGAGAATACAGTATTTGATGCAAAAAGAT 11760030 Query 474531 TGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGA-TATGCGTCATTGGCCTTTT 474589 ||||||| || ||| ||||| | || || ||||| || | | | |||||||| ||| Sbjct 11760031 TGATTGGACGACGTTTCGATGAATCAACAGTTCAATCAGACTGTAAG-CATTGGCCATTT 11760089 Query 474590 AAGGTGATAAATGTTGGTGGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAAA 474649 |||| | || |||||| || |||| | ||| |||| | Sbjct 11760090 GGAGTGAAAGGAAAACAAGGAAAACCAGTGATTGAAGTTGAAGTGAAAGGAGAAAAGAGG 11760149 Query 474650 CAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAA--TGAAACAAACCGC-G 474706 ||||| || ||| | || ||| ||||||| | |||||| |||| |||| || | Sbjct 11760150 CAATTCAATCCAGAAGAGATCTCTGCAATGGTACT--CCAAAAGATGAAGGAAACAGCTG 11760207 Query 474707 AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAAT 474766 || | ||||| ||||| || | |||||||| || || ||||| ||||| || ||| Sbjct 11760208 AGA-CTTATCTCGGACATACCGTGAAAGATGCAGTTATCACAGTTCCTGCATACTTCAAT 11760266 Query 474767 GATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGT 474826 ||| ||| | |||||||| || ||||| | | ||||| || || |||| | || Sbjct 11760267 GATAGTCAGAGGCAAGCAACAAAGGATGCAGCTACCATTGCTGGACTCAATGCAATTCGA 11760326 Query 474827 ATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA--GAATTCTGACA 474884 ||||| ||||||||||| || || || ||||| ||||| | ||||| |||||| Sbjct 11760327 ATTATCAATGAACCAACTGCTGCTGCTCTTGCATATGGATTGGATAAAGGAATTCAAGAT 11760386 Query 474885 AAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 ||||| ||||| || ||||| ||| ||||| Sbjct 11760387 GAGAAG--AATGTATTGATCTTCGATCTCGGAGG 11760418 Score = 105 bits (116), Expect = 4e-17 Identities = 165/236 (70%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 474641 GAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAA 474700 || || |||||||| | || ||| || | ||| | |||||| | | || ||||| || Sbjct 7351966 GAGACGAAACAATTCACTCCTGAAGAAGTCTCTGCCATGGTTCTTACGAAGATGAAGCAG 7351907 Query 474701 ACCGCGAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATAT 474760 | || || || ||||| || || || | | || || | || || |||||||| Sbjct 7351906 ATTGCCGAATCCTACCTTGGTCACGAGGTGAAGAACGCCGTTGTCACCGTGCCAGCATAC 7351847 Query 474761 TTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTT 474820 || |||||| ||||| ||||| || || ||||| ||| ||||| || ||||| ||| Sbjct 7351846 TTCAATGATGCTCAAAAACAAGCCACCAAGGATGCAGGATCTATTGCCGGACTTAACGTT 7351787 Query 474821 TTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 | | || || || ||||||||||| || || | |||||||| | |||||||| Sbjct 7351786 GTGAGAATCATCAACGAACCAACAGCGGCAGCCATCGCTTATGGATTGGATAAGAA 7351731 >seq1 Length=15072434 Score = 132 bits (146), Expect = 3e-25 Identities = 267/394 (68%), Gaps = 4/394 (1%) Strand=Plus/Minus Query 475793 AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTATTTTATCAGGTCAA 475852 ||||| || ||||| || || | ||| || || || ||||||||| | | || || | Sbjct 9321251 AATCCAGACGAAGCAGTAGCCTTTGGTGCAGCCGTTCAAGCAGCTGTACTTTCTGGAGTA 9321192 Query 475853 TCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCACTT--TCATTAGGTC 475910 ||| || | | || || || |||| ||||| || ||||| |||| || Sbjct 9321191 AAAGATGATACTATCAAGGATGTTTTACTCGTTGATGTTGTCCCACTAAGTCAT--GGAA 9321134 Query 475911 TTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTCCTATCCCATGCA 475970 ||||||||| |||||| | ||||| ||| | ||||| ||||| ||| || || || Sbjct 9321133 TTGAAACAGCTGGAGGAGTAATGACCAATTTGATTGATAGAAACACTAGAATTCCTGCCA 9321074 Query 475971 AAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAACCATCCAAATCT 476030 || || ||| |||| | || ||| | || ||||| | ||| | || ||| | | Sbjct 9321073 AAGCTTCCAAAACATTTACAACGTATGCAGACAATCAGCCTGGTGTCTCTATTCAAGTAT 9321014 Query 476031 TTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAG 476090 ||||| ||| | | ||| ||||||| | |||||||| ||| | | | Sbjct 9321013 ACGAAGGAGAACGTGCTATGACTCGAGATAATCATCGTCTTGGAACATTTGAATTAACTG 9320954 Query 476091 GTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAA 476150 | || || || ||||| |||||||||| ||| | || || || |||||||||||||||| Sbjct 9320953 GAATCCCACCAGCTCCACGAGGAGTTCCACAAGTCGATGTAACGTTTGATATTGATGCAA 9320894 Query 476151 ATGGTATTCTTAATGTTACTGCTTGTGATAAATC 476184 |||| ||||| ||||| | ||| |||||||| Sbjct 9320893 ATGGAATTCTCAATGTATCAGCTGCCGATAAATC 9320860 Score = 123 bits (136), Expect = 2e-22 Identities = 345/517 (67%), Gaps = 18/517 (3%) Strand=Plus/Minus Query 474411 AAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAACTGAACATCTTATTGGAG 474470 |||| || | || || || || || || ||||||| || || || || |||| | Sbjct 9322307 AAGGGAACAAGACTACGCCTTCCTACGTGGCTTTTACAGATACAGAGAGACTCGTTGGTG 9322248 Query 474471 ATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTATTTTTGATGCTAAAAGAT 474530 |||| || ||| ||||||| || |||||| | ||||| |||| ||||| ||| | Sbjct 9322247 ATGCAGCAAAAGATCAAGCCGCTCGTAATCCGGAGAATACAGTTTTCGATGCAAAACGTC 9322188 Query 474531 TGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATATGCGTCATTGGCCTTTTA 474590 | ||||| | || ||||| ||||| ||||||||||| |||||||| || | Sbjct 9322187 TAATTGGAAGACGATTCGATGAAGAAACTGTTCAATCTGATATTAAACATTGGCCATTCA 9322128 Query 474591 AGGTGATAAATGTTGGT--GGTAAACCATATATAGAAGCAATACACGCAGGTGAAACTAA 474648 || |||| | || || || | | || | | ||| |||| Sbjct 9322127 CAGT--TAAAGGAAAACAAGGAAAGCCCGTTGTTGAGGTTGAAGTGAAAGGAGAAAAACG 9322070 Query 474649 ACAATTTTCACCGGAACAAATTTCTTCAATGGT--TTTAGCCAAAATGAAACAAACCGCG 474706 | |||| | ||| |||| ||| ||||||| || || || |||||| |||| || Sbjct 9322069 AGAATTCAATGCTGAAGAAATATCTGCAATGGTACTTCAG--AAGATGAAAGAAACGGCT 9322012 Query 474707 --AGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTA 474764 |||| || ||||| || ||| ||||| || |||||||| || |||||||||| Sbjct 9322011 GAAGCTG-TA-CTTGGGCATTCTGTACGGGATGCTGTCATTACTGTGCCTGCATATTTTA 9321954 Query 474765 ATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTAC 474824 ||||| || | || || || |||||||| | | ||||| || || |||| | | Sbjct 9321953 ATGATAGCCAGAGGCAGGCGACCAAAGATGCAGCTACTATTGCTGGACTCAATGCAATTC 9321894 Query 474825 GTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAA--GAATT-CTG 474881 ||||||| ||||||||||| || || || | || ||||| || ||||| ||||| ||| Sbjct 9321893 GTATTATCAATGAACCAACGGCGGCAGCTTTGGCCTATGGACTCGATAAAGGAATTACTG 9321834 Query 474882 ACAAAGAAGTAAATGTTTTAATCTTTGATTGTGGAGG 474918 | ||||| ||| |||| || || |||| ||||| Sbjct 9321833 A-TGAGAAG--AATATTTTGATTTTCGATTTGGGAGG 9321800 Score = 113 bits (124), Expect = 3e-19 Identities = 246/363 (68%), Gaps = 4/363 (1%) Strand=Plus/Minus Query 475365 CAACAGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGTATCATGGT 475424 |||| || |||||| | |||||||| || ||||| |||||| | || || || || | Sbjct 9321740 CAACTGCAGGAGATACTCATCTTGGAGGAGAAGACTTTGATTCTCGAGTTCTA-CAACAT 9321682 Query 475425 GTGTTGAA-GATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCATTA 475483 | ||| || ||||| || |||| | | ||| ||||| || | | ||| | Sbjct 9321681 TTTATGACCGAATTCAAAAGAAAAACTGGAAAAGATATTTCATCAAATCCCCGCGCAATT 9321622 Query 475484 AGACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACT 475543 | ||||| |||| || ||||||||||||||||| ||||||| | | ||| || | Sbjct 9321621 CGTCGTCTCCGAACGGCATGTGAACGTGCTAAGCGTACTCTTTCCAGTTCCACTGAAGCA 9321562 Query 475544 ACTGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTCTTATTACAAGGGCT 475603 ||||| || || ||||| | ||||| |||| ||||| || | || ||| | || Sbjct 9321561 ACTGTAGAGGTCGATTCGTTATTTGATGGAACTGATTTCTATTCGAAAATCACACGTGCA 9321502 Query 475604 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGTT 475663 | ||| ||||| | ||| ||||||| || | || || | || || |||||| | | Sbjct 9321501 AGATTCGAAGAGCTCTGTGCTGATCTTTTCCGCAAGACTTTGGAGCCGGTTGAAAAGGCA 9321442 Query 475664 CTCAGAGATTCTAAACTTGACAAA-TCACAAGTCCATGAAATTGTTCTTGTAGGAGGTTC 475722 || | ||| | ||| ||| ||| || || || ||||| |||| | || || || || Sbjct 9321441 CTTCGTGATGCAAAAACTGATAAAGGCAGAA-TCGATGAAGTTGTCTTGGTTGGGGGATC 9321383 Query 475723 AAC 475725 ||| Sbjct 9321382 AAC 9321380 >seq3 Length=13783801 Score = 114 bits (126), Expect = 8e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTT 480611 || |||||||| || | |||||| ||| || || | || ||||| | ||||| Sbjct 5942226 CGGAGACGGAGAACCAAATGAAGAGTAGACTCCTTTTGGATGTTGTAATCGGAGAGAGTA 5942167 Query 480612 CTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCT 480671 | | ||| || ||||||||||| ||||| || | ||| |||||||| || || || ||| Sbjct 5942166 CGGCCATCCTCGAGTTGCTTTCCGGCAAAGATCAAACGCTGTTGATCTGGTGGGATACCT 5942107 Query 480672 TCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGG 480731 ||||||||||| ||||| || || |||||||| |||| | | ||||| Sbjct 5942106 TCCTTGTCTTGGATCTTGGCCTTCACGTTCTCAATAGTGTCAGAAGCTTCAACCTCAAGA 5942047 Query 480732 GTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 |||||||| || ||||| | |||||| ||||| || || Sbjct 5942046 GTAATAGTCTTTCCGGTCAAAGTCTTGACGAAGATCTG 5942009 Score = 107 bits (118), Expect = 1e-17 Identities = 115/152 (76%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 480618 TCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTG 480677 ||||| || ||||||||||| || || |||||||| ||||| |||||||||||||||||| Sbjct 5942388 TCTTCGAGCTGCTTTCCAGCGAAGATGAGACGTTGCTGATCTGGAGGAATTCCTTCCTTG 5942329 Query 480678 TCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATA 480737 || |||||||| || || || || ||||| | | | ||| ||||| || Sbjct 5942328 TCCTGAATCTTGGCCTTCACGTTCTCGATGGTATCGGAGGCTTCGACTTCGAGGGTGATG 5942269 Query 480738 GTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || ||| | |||||||| ||||| ||||| Sbjct 5942268 GTCTTTCCGATAAGAGTCTTGACGAAGATTTG 5942237 Score = 96.9 bits (106), Expect = 2e-14 Identities = 153/217 (71%), Gaps = 2/217 (1%) Strand=Plus/Minus Query 480554 AAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCT 480613 |||||| || || | ||||| ||| ||| || | || || |||| || || | Sbjct 5941209 AAGACGAAGAACCAAGTGAAGAGTAGATTCCTTCTGGATGTTGTAGTCAGACAGGGTGCG 5941150 Query 480614 GTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTC 480673 | || || || |||||||| || || || ||||| || ||||| || ||||||||||| Sbjct 5941149 GCCGTCCTCGAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGATCTGGTGGAATTCCTTC 5941090 Query 480674 CTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG-TGTGTGAAGTTTCAAGGG 480732 ||||||||| ||||| ||||||| ||| || ||||| | | | | || |||| Sbjct 5941089 CTTGTCTTGGATCTTGGCTTTGACATTTTCGATGGTATCGGAAGCCTCCA-CCTCCAGGG 5941031 Query 480733 TAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | |||||||| || || | || || ||||| ||||| Sbjct 5941030 TGATAGTTTTTCCAGTCAACGTTTTGACGAAGATTTG 5940994 Score = 95.1 bits (104), Expect = 8e-14 Identities = 103/137 (75%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 || ||||| |||||||| || ||||| || || ||||||||||||||||| ||||| Sbjct 5942601 CCGGCAAAGATAAGACGCTGCTGATCTGGTGGGATTCCTTCCTTGTCTTGGATCTTGGCC 5942542 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 || ||| ||| || ||||||| | | ||| ||||| ||||| || || || | | Sbjct 5942541 TTCACATTTTCGATGGTATCAGAGGCTTCGACTTCGAGGGTGATAGTCTTTCCAGTCAAA 5942482 Query 480753 GTCTTAACGAAAATTTG 480769 ||||| ||||| ||||| Sbjct 5942481 GTCTTCACGAAGATTTG 5942465 Score = 95.1 bits (104), Expect = 8e-14 Identities = 154/220 (70%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 480552 CGAAGACGGAGTACAAGATGAAGTGT--ACTTTCTTTAGAAACATTATAATCAGCTAGAG 480609 |||||||| || || ||||||||||| ||| ||| || || ||||| | ||||| Sbjct 5943692 CGAAGACGAAGAACGAGATGAAGTGTCGACTCCTTTTGGATG--TTGTAATCGGATAGAG 5943635 Query 480610 TTCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTC 480669 | | ||| || || |||||||||||||| || | |||||| ||||| || || |||| Sbjct 5943634 TGCGTCCATCCTCGAGCTGCTTTCCAGCAAAGATCAAACGTTGCTGATCTGGTGGGATTC 5943575 Query 480670 CTTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAA 480729 | ||||| || || || || ||||||| ||||| || || | | || | Sbjct 5943574 CCTCCTTATCCTGGATTTTGGCTTTGACATTCTCAATGGTGTCCGAAGCTTCGACCTCGA 5943515 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || || ||||| || || | |||||| ||||| || || Sbjct 5943514 GAGTGATGGTTTTTCCAGTCAAAGTCTTGACGAAGATCTG 5943475 Score = 86.0 bits (94), Expect = 4e-11 Identities = 101/137 (74%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 480633 CCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTTGTCTTGAATCTTTTGT 480692 |||||||||||||| | || ||||| || |||||||||||||||||||| ||||| Sbjct 5941864 CCAGCAAAAATAAGTCTCTGCTGATCTGGTGGAATTCCTTCCTTGTCTTGGATCTTGGCC 5941805 Query 480693 TTGACAGCTTCAATAGTATCAGTGTGTGAAGTTTCAAGGGTAATAGTTTTACCGGTGAGA 480752 |||||| ||| || || || | | | ||| ||||| || || || ||||| | Sbjct 5941804 TTGACATTTTCGATGGTGTCGGAGGCTTCGACTTCGAGGGTGATGGTCTTTCCGGTCAAT 5941745 Query 480753 GTCTTAACGAAAATTTG 480769 ||||| ||||| || || Sbjct 5941744 GTCTTGACGAAGATCTG 5941728 >seq6 Length=17718942 Score = 107 bits (118), Expect = 1e-17 Identities = 164/231 (71%), Gaps = 2/231 (1%) Strand=Plus/Minus Query 474647 AAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGCCAAAATGAAACAAACCGC- 474705 || ||||| | || ||| || |||| | |||||| | | ||| ||||| | | ||| Sbjct 6091291 AAGCAATTCACCCCAGAAGAAGTTTCCGCTATGGTTCTCGTCAAGATGAAGGAGATCGCC 6091232 Query 474706 GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAA 474765 ||| || || |||||| | ||||| | | || || | ||||| ||||| ||||| || Sbjct 6091231 GAG-TCCTACCTTGGAAAGGAAGTCAAGAACGCCGTCGTCACTGTCCCAGCTTATTTCAA 6091173 Query 474766 TGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACG 474825 || | ||||||||||| || || ||||| |||| || || || | || ||| | || Sbjct 6091172 CGACGCCCAACGTCAAGCTACCAAGGATGCCGGAACCATCGCTGGATTGAACGTTGTTCG 6091113 Query 474826 TATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 ||| || || || ||||| || ||||| | || || || ||||| ||||| Sbjct 6091112 TATCATCAACGAGCCAACCGCCGCCGCCATCGCCTACGGACTTGACAAGAA 6091062 Score = 100 bits (110), Expect = 2e-15 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 474329 GCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAA 474388 || ||||| || |||||||||||||| ||| | || || |||| | || || Sbjct 3293305 GCTATTGGAATCGATTTAGGAACTACCTACTGCTGCGTGAGAGTTTTCATGCACGGGAAG 3293364 Query 474389 GTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACT 474448 |||||||| |||||||| || ||||| || | ||||| ||||||||||| |||| || Sbjct 3293365 GTAGAAATCATTGCCAACGATCAAGGAAACCGTACAACTCCATCATATGTGGCTTTCACC 3293424 Query 474449 GAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAG 474488 | || || | ||| || ||||||||||| || |||||| Sbjct 3293425 GGCACCGAGCTTCTCATCGGAGATGCTGCCAAGAATCAAG 3293464 >seq4 Length=17493829 Score = 104 bits (114), Expect = 2e-16 Identities = 146/206 (71%), Gaps = 12/206 (6%) Strand=Plus/Plus Query 297313 GTTACCGGTGTTTTAGATTGTTGGTTTGAATCAGGTTCTATGCCTTATGGTCAAATTCAT 297372 ||| ||| ||||| |||||||||||||||||||| || ||||| |||| || | |||| Sbjct 10370355 GTTTCCGAAGTTTTTGATTGTTGGTTTGAATCAGGATCCATGCCATATGCCCAGAATCAT 10370414 Query 297373 TATCCTTTTGAAAATTCCGAAATTTT---AGACACTTCACAAGATTATATTGCAGATTTT 297429 ||||| ||||| || | |||| || ||||| || | | || ||||| Sbjct 10370415 TATCCATTTGAGAACCGCAAAATCTTCGAAGACAATTTCCCA---------GCTGATTTC 10370465 Query 297430 ATAACAGAATCAATTGATCAAACAAGAGGTTGGTTTTATACTTTATTAGTTCTTTCTACA 297489 || | ||| |||||| ||||| | || |||||||| || | ||||||| || || Sbjct 10370466 ATCGCTGAAGGAATTGACCAAACCCGTGGGTGGTTTTACACACTTCTAGTTCTGTCAACT 10370525 Query 297490 GCTATATTTAACAAACCAGCATTTAA 297515 ||| | || ||||| ||| |||| || Sbjct 10370526 GCTTTGTTCAACAAGCCACCATTCAA 10370551 Score = 100 bits (110), Expect = 2e-15 Identities = 118/160 (74%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| || ||||| |||||||| ||| || || | |||| | || || |||| Sbjct 17278983 TTGGAATCGATTTGGGAACTACCTACTCCTGCGTGGGAGTTTTCATGCACGGAAAGGTAG 17279042 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 |||| |||||||| || ||||| || | ||||| ||||||||||| |||| || || | Sbjct 17279043 AAATCATTGCCAACGATCAAGGAAACCGTACAACTCCATCATATGTGGCTTTCACCGACA 17279102 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGC 474492 | || | ||| || ||||||||||| || |||||| ||| Sbjct 17279103 CCGAGCGTCTCATCGGAGATGCTGCCAAGAATCAAGTTGC 17279142 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3268178899736036