Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_021901.1 Length=197693 Score E Sequences producing significant alignments: (Bits) Value seq1 91.5 2e-13 >seq1 Length=15072434 Score = 91.5 bits (100), Expect = 2e-13 Identities = 82/103 (80%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 172522 AAGAAGGTGATTTAGGCCCAATTTATGGATTTCAATGGAGACATGCAGGGGCTCAATATA 172581 ||||||| ||| | || ||| |||||||||||||||||||||| ||||| ||||| Sbjct 5138690 AAGAAGGAGATCTTGGACCAGTTTATGGATTTCAATGGAGACACTTTGGGGCGAAATATG 5138749 Query 172582 TCGACTGTGATACAGATTACACAGGACAAGGAGTGGACCAATT 172624 | || ||| ||||||||||| | |||||||| || || || || Sbjct 5138750 TGGATTGTCATACAGATTACTCTGGACAAGGTGTTGATCAGTT 5138792 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 632489544657160