Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq3 89.7 2e-12 >seq3 Length=13783801 Score = 89.7 bits (98), Expect = 2e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 254978 ATACCAATGATCCGTGTGTTCAACAACGTGGCTCGCTACGTCGATCAAGGGGGCGGCAAA 255037 ||||||||| | ||||| | ||| || ||||| || || |||||||| || |||| Sbjct 9227323 ATACCAATGCTTCGTGTCTACAATAATACTGCTCGTTATGTTGATCAAGGAGGAAACAAA 9227264 Query 255038 CGCCCAGGAGCGTTCACCATCTACCTGGAGCCGTGGCACGCCGACAT 255084 ||||||||||| || | || ||||||||||| ||||||||||| || Sbjct 9227263 CGCCCAGGAGCATTTGCTATTTACCTGGAGCCATGGCACGCCGATAT 9227217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1588335857546115