Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20elegans_20[refseq_20GCF_5F000002985.6_202013-02-07] 7 sequences; 100,286,401 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=13783801 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/189 (71%), Gaps = 4/189 (2%) Strand=Plus/Plus Query 78190 GTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCAT--AC 78247 || |||||||||||||| || |||||||| ||||||||||||||||| | ||||| | Sbjct 9225648 GTACGCAAATAGTACATTCCAGTCTTGAGTCCCTTCTTCCATCCGTAGAAATGCATTGAT 9225707 Query 78248 TCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGA 78307 || | | ||| || || || ||||| ||||| || || ||||| || || | Sbjct 9225708 GTGATACC--GGCGTAGCTTGGCTTGGCCATGTGAATGTTAAGAGATTGGGATTGATCAA 9225765 Query 78308 TGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGG 78367 |||| || || || || || ||||| || || | ||||| | |||||||| | | Sbjct 9225766 TGTATGCTCCACGATCAGCAGCCATCTCAATAATGTCTTTTTGAGAGATCTCCCACACTG 9225825 Query 78368 TCCGGTAAA 78376 | || |||| Sbjct 9225826 TGCGATAAA 9225834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548524752004080