Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20japonica_20[genbank_20GCA_5F000147155.1_202010-09- 24] 18,817 sequences; 166,256,191 total letters Query= NC_002671.1 Length=15179 Score E Sequences producing significant alignments: (Bits) Value seq9294 100 3e-17 >seq9294 Length=1257 Score = 100 bits (110), Expect = 3e-17 Identities = 108/143 (76%), Gaps = 0/143 (0%) Strand=Plus/Minus Query 14529 GGAACAGTAAAATGGTTTAACGCAGATAAAGGATTTGGCTTTATCACTTCAGAAGAAGGC 14588 || ||||| |||||||| ||||| ||||||||||| ||||||||| | |||||||| Sbjct 151 GGTACAGTGAAATGGTTCAACGCGGATAAAGGATTCGGCTTTATCGAAACTGAAGAAGGA 92 Query 14589 AAAGATTTGTTCGCTCACTTCTCAGCAATCCAATCTGATGGATTCAAATCACTTGATGAA 14648 | ||| | |||| ||| ||| ||||| ||| ||| || | |||||| | || ||| Sbjct 91 ACAGACGTATTCGTTCATTTCAGTGCAATTCAAGGTGAAGGTTACAAATCTTTGGACGAA 32 Query 14649 GGTCAAAAAGTTGAATTTGATGT 14671 |||||| ||| ||||||| || Sbjct 31 GGTCAACGCGTTCAATTTGAAGT 9 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 48443857700482