Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20japonica_20[genbank_20GCA_5F000147155.1_202010-09- 24] 18,817 sequences; 166,256,191 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq17815 91.5 3e-13 >seq17815 Length=64061 Score = 91.5 bits (100), Expect = 3e-13 Identities = 110/147 (75%), Gaps = 2/147 (1%) Strand=Plus/Plus Query 298328 TCGCGGACATTCAATAGTTTTCCACGAAGAGGGAACACTCCATATCTCTCGCGACCGACC 298387 || || || |||| || ||||||||||| ||||||||||| || | || ||||||||| Sbjct 23402 TCACGAACGTTCAGCAGCTTTCCACGAAGTGGGAACACTCCGTACTTGTCACGACCGACC 23461 Query 298388 ACGGACAGCCCTGCGATTGCAAGTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTG 298447 || | ||| || | | || |||||| || ||||| ||||| || || ||||| ||| Sbjct 23462 ACAGCCAGACCAGATACCGCCAGTGTCTTGGCCGAATCTCCCTCAGTGAGGATGAGCGTG 23521 Query 298448 CACATTTTGC-TGTTATTCGTTCCAGC 298473 ||| | ||| ||| || |||||||| Sbjct 23522 CAC-TGCTGCGAGTTTTTAGTTCCAGC 23547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102614103558950