Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20japonica_20[genbank_20GCA_5F000147155.1_202010-09- 24] 18,817 sequences; 166,256,191 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq5644 138 1e-26 seq3841 138 1e-26 seq17432 132 6e-25 seq18040 129 7e-24 seq17418 129 7e-24 seq12970 129 7e-24 seq18150 114 2e-19 seq18001 114 2e-19 seq17102 114 2e-19 seq13215 114 2e-19 seq10980 114 2e-19 seq18085 109 7e-18 seq17751 102 1e-15 seq18154 100 3e-15 seq18694 96.9 4e-14 seq18122 96.9 4e-14 seq17833 91.5 2e-12 >seq5644 Length=2010 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || |||||||| ||||| ||||| | || Sbjct 90 GCTTGGCAAGCTCTCCCGGAAGGATCAAACGAACGGCGGTTTGGATTTCGCGAGAAGAGA 149 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| |||||| | | ||||||| |||| || Sbjct 150 TAGTCGAGCGCTTGTTGTAGTGCGCCAGACGAGAGGCCTCAGCGGCGATGCGCTCGAACA 209 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||| | |||| ||||| || ||| || | Sbjct 210 CGTCATTGACGAACGAGTTCATGATGGACATGGCCTTGGAGGAGACTCCAGTGTCTGGAT 269 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 270 GGACCTGCTTGAGCACACGGTAGATG 295 >seq3841 Length=1974 Score = 138 bits (152), Expect = 1e-26 Identities = 154/206 (75%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || |||||||| ||||| ||||| | || Sbjct 303 GCTTGGCAAGCTCTCCCGGAAGGATCAAACGAACGGCGGTTTGGATTTCGCGAGAAGAGA 244 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| |||||| | | ||||||| |||| || Sbjct 243 TAGTCGAGCGCTTGTTGTAGTGCGCCAGACGAGAGGCCTCAGCGGCGATGCGCTCGAACA 184 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||| | |||| ||||| || ||| || | Sbjct 183 CGTCATTGACGAACGAGTTCATGATGGACATGGCCTTGGAGGAGACTCCAGTGTCTGGAT 124 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 123 GGACCTGCTTGAGCACACGGTAGATG 98 >seq17432 Length=65892 Score = 132 bits (146), Expect = 6e-25 Identities = 153/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || |||||||| ||||| ||||| | || Sbjct 57708 GCTTGGCAAGCTCTCCCGGAAGGATCAAACGAACGGCGGTTTGGATTTCGCGAGAAGAGA 57767 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| ||||||||||||| |||||| | | ||||||| |||| || Sbjct 57768 TAGTCGAGCGCTTGTTGTAGTGCGCCAGACGAGAGGCCTCAGCGGCGATGCGCTCGAACA 57827 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| || |||||||||| ||||| | |||| ||||| || ||| || | Sbjct 57828 CGTCATTGACGAATGAGTTCATGATGGACATGGCCTTGGAGGAGACTCCAGTGTCTGGAT 57887 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 57888 GGACCTGCTTGAGCACACGGTAGATG 57913 >seq18040 Length=59197 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || || || ||||| | | || Sbjct 52500 GCTTGGCGAGCTCTCCCGGAAGGATCAAACGGACGGCCGTTTGAATTTCGCGAGAGGAGA 52441 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| ||||||| |||||| ||| |||| | ||||||| |||| || Sbjct 52440 TGGTCGATCGCTTGTTGTAGTGCGCAAGACGGGAGGCTTCGGCGGCGATGCGTTCGAACA 52381 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| ||||| | || ||||| || ||| |||| Sbjct 52380 CGTCGTTGACGAACGAGTTCATGATTGACATGGCTTTCGAGGAGACTCCAGTGTCTGGGT 52321 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 52320 GAACCTGCTTGAGCACACGGTAGATG 52295 >seq17418 Length=39954 Score = 129 bits (142), Expect = 7e-24 Identities = 203/288 (70%), Gaps = 2/288 (1%) Strand=Plus/Plus Query 868709 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 868768 |||||| |||||||||||| ||||| || || | |||||| |||||| | |||| Sbjct 378 ACGCGCTTCTCGAAAAAGTTTGTCTTTCCATCAATCGAGATATTCTCCATGAAGTCGAAC 437 Query 868769 GGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACA 868828 || || | ||||||| ||||||| |||||||| | ||||| | ||||||||| Sbjct 438 GGATTTTTCTTCTTGTACAGCTTTTCACATCCGAGTTCAACAAGCAGATGATCGGCGACA 497 Query 868829 AACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCAGCGAC 868888 ||||| ||||||||| ||||||| | |||||| || || | | || ||||||| Sbjct 498 AACTCAATGTACTGGGACATGAGACGACAGTTCATTCCAATCATGTCGACTGGCAGCGCT 557 Query 868889 TCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCTGCCTGGGCACG-TC 868947 ||| | | || || | ||||||| ||| || || ||| |||| | | | || || Sbjct 558 TCGGTAAGGAATTCCTGTTCGATCTTGACTGCGTCACTGATAATCT-CGTAGATTCGTTC 616 Query 868948 GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAGTC 868995 | | |||| || |||||||| ||||| ||||| |||||||| Sbjct 617 CTGGGTGAGCTTTTTTTGGAGCATCGAATAGAGGAGGCATGCAAAGTC 664 >seq12970 Length=1036 Score = 129 bits (142), Expect = 7e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || ||||| ||||| | | Sbjct 416 GCTTGGCGAGCTCTCCCGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGAGATGAAA 475 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| ||||||| |||||| ||| |||| | ||||||| |||| || Sbjct 476 TGGTCGATCGCTTGTTGTAGTGCGCAAGACGGGAGGCTTCGGCGGCGATGCGTTCGAACA 535 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || ||| |||| Sbjct 536 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTCGAGGAGACTCCAGTGTCTGGGT 595 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 596 GAACCTGCTTGAGCACACGGTAGATG 621 >seq18150 Length=702657 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || || || || ||||| | || Sbjct 700676 GCTTGGCAAGCTCTCCCGGAAGGATCAAACGGACAGCCGTTTGAATTTCGCGGGACGAGA 700617 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||| |||| ||| || || | | | ||||| |||| || Sbjct 700616 TCGTCGAGCGCTTGTTGTAGTGAGCCAAACGAGACGCTTCAGCGGCAATGCGTTCGAACA 700557 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || |||||||| Sbjct 700556 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTCGAGGAGACTCCAGTGTCGGGGT 700497 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 700496 GGACCTGCTTGAGCACACGGTAGATG 700471 >seq18001 Length=114689 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || || || || ||||| | || Sbjct 205 GCTTGGCAAGCTCTCCCGGAAGGATCAAACGGACAGCCGTTTGAATTTCGCGGGACGAGA 264 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||| |||| ||| || || | | | ||||| |||| || Sbjct 265 TCGTCGAGCGCTTGTTGTAGTGAGCCAAACGAGACGCTTCAGCGGCAATGCGTTCGAACA 324 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || |||||||| Sbjct 325 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTCGAGGAGACTCCAGTGTCGGGGT 384 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 385 GGACCTGCTTGAGCACACGGTAGATG 410 >seq17102 Length=105313 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || ||||| ||||| | || Sbjct 86029 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGAGACGAGA 86088 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| ||| |||| | | ||||| |||| || Sbjct 86089 TGGTCGAGCGCTTGTTGTAGTGAGCAAGACGAGAGGCTTCGGCGGCAATGCGTTCGAACA 86148 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||| | || ||||| || ||| |||| Sbjct 86149 CGTCATTGACGAACGAGTTCATGATAGACATGGCTTTCGAGGAGACTCCAGTGTCTGGGT 86208 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 86209 GAACCTGCTTGAGCACACGGTAGATG 86234 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | |||| || ||||| || ||||| ||||| | || Sbjct 68516 GCTTGGCGAGCTCTCCTGGAAGAATCAAACGGACGGCCGTTTGGATTTCGCGAGAAGAGA 68457 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| ||| || | | | ||||| |||| || Sbjct 68456 TGGTCGAGCGCTTGTTGTAGTGAGCAAGACGAGAGGCTTCAGCGGCAATGCGTTCGAACA 68397 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||| | || ||||| || ||| |||| Sbjct 68396 CGTCATTGACGAACGAGTTCATGATAGACATGGCTTTCGAGGAGACTCCAGTGTCTGGGT 68337 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 68336 GAACCTGCTTGAGCACACGGTAGATG 68311 Score = 105 bits (116), Expect = 8e-17 Identities = 147/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | |||| || ||||| || ||||| ||||| | || Sbjct 96554 GCTTGGCGAGCTCTCCTGGAAGAATCAAACGGACGGCCGTTTGGATTTCGCGAGAAGAGA 96495 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| ||| || | | | ||||| |||| || Sbjct 96494 TGGTCGAGCGCTTGTTGTAGTGAGCAAGACGAGAGGCTTCAGCGGCAATGCGTTCGAACA 96435 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||| | || ||||| || ||| |||| Sbjct 96434 CGTCATTGACGAACGAGTTCATGATAGACATGGCTTTCGAGGAGACTCCAGTGTCTGGGT 96375 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 96374 GAACCTGCTTGAGCACACGGTAGATG 96349 >seq13215 Length=4384 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || || || || ||||| | || Sbjct 211 GCTTGGCAAGCTCTCCCGGAAGGATCAAACGGACAGCCGTTTGAATTTCGCGGGACGAGA 152 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 |||| ||||||||| |||| |||| ||| || || | | | ||||| |||| || Sbjct 151 TCGTCGAGCGCTTGTTGTAGTGAGCCAAACGAGACGCTTCAGCGGCAATGCGTTCGAACA 92 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || |||||||| Sbjct 91 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTCGAGGAGACTCCAGTGTCGGGGT 32 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 31 GGACCTGCTTGAGCACACGGTAGATG 6 >seq10980 Length=5871 Score = 114 bits (126), Expect = 2e-19 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || ||||| ||||| | || Sbjct 2393 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGAGAAGAGA 2334 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| ||| |||| | | ||||| |||| || Sbjct 2333 TGGTCGAGCGCTTGTTATAGTGAGCAAGACGAGAGGCTTCGGCGGCAATGCGTTCGAACA 2274 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| ||||||||||||| ||||| | || ||||| || ||| |||| Sbjct 2273 CGTCATTGACGAACGAGTTCATGATAGACATGGCTTTCGAGGAGACTCCAGTGTCTGGGT 2214 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | |||||||||||||| ||||||| Sbjct 2213 GAACCTGCTTGAGCACACGGTAGATG 2188 >seq18085 Length=168442 Score = 109 bits (120), Expect = 7e-18 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 1630065 CTGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGA 1630124 ||| |||||||| || || |||| ||| ||||||| ||||| || | || ||||| || Sbjct 30081 CTGATCGACGTAACGAGCAGTGTTGTTGTAGACGCGAAGCATCGGAATCAGTCCGTTCGA 30140 Query 1630125 CTCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCC 1630184 | ||||||||||| || | | |||| ||| || | ||||||| || | || Sbjct 30141 CGTTCCGTTGGTGCCAGCAATCACCGATCCGGTGGCACGAATCTTGTGCACGTTGAGACC 30200 Query 1630185 GATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTC 1630244 ||| || || || ||| || || || ||||| ||||| |||||||| ||||| ||| Sbjct 30201 GATTCCACCTGCGCTCTTCGATATAAGGGCGCATTGTTTTAGCGTGTCATAGATTCCCAG 30260 Query 1630245 GATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGG 1630292 |||||||| | |||| | || ||||||||||| |||| || Sbjct 30261 AATCGAGTCATCACTCATCGTGAGCAGGAAGCACGACGACATTTGTGG 30308 >seq17751 Length=90511 Score = 102 bits (112), Expect = 1e-15 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | |||||| || || || || || || ||||| | | Sbjct 68510 GCTTGGCAAGCTCTCCTGGAAGGATCAGACGGACAGCAGTTTGAATTTCGCGAGAAGAAA 68569 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| || || | | | ||||| |||| || Sbjct 68570 TGGTCGAGCGCTTGTTGTAGTGAGCAAGACGAGACGCTTCAGCGGCAATGCGTTCGAACA 68629 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || ||| |||| Sbjct 68630 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTTGAGGAGACTCCAGTGTCTGGGT 68689 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||| |||||||| ||||||| Sbjct 68690 GAACCTGTTTGAGCACACGGTAGATG 68715 >seq18154 Length=365308 Score = 100 bits (110), Expect = 3e-15 Identities = 133/183 (73%), Gaps = 4/183 (2%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| || || ||| |||||||| |||||||| || | |||||| || |||| | Sbjct 11270 GCCAACTCTCCCGGCAGAATCAGGCGAACGGCGGTTTGCACCTCGCG--TGACGATATCG 11213 Query 1254408 TTG--CGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGT 1254465 | | || ||||| | ||||||| |||| ||||||| ||||||| |||| | || Sbjct 11212 TCGAACGTTTGTTATAATGCGCCAAACGGGACGCCTCGGAAGCGATGCGTTCGAAGACGT 11153 Query 1254466 CGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGTGCA 1254525 ||||||| ||||||||||||| |||||| | || |||| ||| ||| ||||| | Sbjct 11152 CGTTGACGAACGAGTTCATGATCGACATTGCTTTCGACGAGACGCCAGTGTCCGGGTGAA 11093 Query 1254526 CCT 1254528 ||| Sbjct 11092 CCT 11090 >seq18694 Length=1090 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || || || || ||||| | | Sbjct 1003 GCTTGGCAAGCTCTCCTGGAAGGATCAAACGGACAGCAGTTTGAATTTCGCGAGAAGAAA 944 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| || || | | | ||||| |||| || Sbjct 943 TGGTCGAGCGCTTGTTGTAGTGAGCAAGACGAGACGCTTCAGCGGCAATGCGTTCGAACA 884 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || ||| |||| Sbjct 883 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTTGAGGAGACTCCAGTGTCTGGGT 824 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||| |||||||| ||||||| Sbjct 823 GAACCTGTTTGAGCACACGGTAGATG 798 >seq18122 Length=78216 Score = 96.9 bits (106), Expect = 4e-14 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || || || || ||||| | | Sbjct 58558 GCTTGGCAAGCTCTCCTGGAAGGATCAAACGGACAGCAGTTTGAATTTCGCGAGAAGAAA 58617 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||||||||| |||| || ||||| || || | | | ||||| |||| || Sbjct 58618 TGGTCGAGCGCTTGTTGTAGTGAGCAAGACGAGACGCTTCAGCGGCAATGCGTTCGAACA 58677 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | || ||||| || ||| |||| Sbjct 58678 CGTCGTTGACGAACGAGTTCATGATCGACATGGCTTTTGAGGAGACTCCAGTGTCTGGGT 58737 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATG 1254548 | ||||| |||||||| ||||||| Sbjct 58738 GAACCTGTTTGAGCACACGGTAGATG 58763 >seq17833 Length=230544 Score = 91.5 bits (100), Expect = 2e-12 Identities = 99/131 (76%), Gaps = 3/131 (2%) Strand=Plus/Plus Query 1572506 TCGGCGTCGGTGTGGTTGAAGAGCACGACGCCCACCTCGCCGCGATAGTCGGCATCGATG 1572565 ||||||||| | |||||| |||| || ||||||||| ||||||||| ||||||| Sbjct 71215 TCGGCGTCGTTAAAGTTGAACAGCAGCACCTTCACCTCGCCACGATAGTCGCTATCGATG 71274 Query 1572566 ACGCCTGCGCCGACGTCGATG---CCCCTGACGGCCAGGGACGAGCGCGGCGCCACGCGC 1572622 || || ||||||||||||||| | || |||| || ||||||||||| || | Sbjct 71275 ACACCGGCGCCGACGTCGATGAAATGCTTGGCGGCGAGCCCAGAGCGCGGCGCAACTCTT 71334 Query 1572623 CCATAGTAGCC 1572633 ||||| ||||| Sbjct 71335 CCATAATAGCC 71345 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6105594988859989