Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20japonica_20[genbank_20GCA_5F000147155.1_202010-09- 24] 18,817 sequences; 166,256,191 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq17903 82.4 1e-10 >seq17903 Length=44271 Score = 82.4 bits (90), Expect = 1e-10 Identities = 68/82 (83%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 11720 TGTAACCCAGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGG 11778 ||||||| ||||||| |||||||||||| ||||| | |||||||| || | |||||| | Sbjct 29843 TGTAACCGTGTCCTCGGTAGTATAGTGGTGAGTATCCGCGTCTGTCACATGCGAGACCCG 29784 Query 11779 GGTTCGATTCCCCGACGAGGAG 11800 ||||| |||||| | || |||| Sbjct 29783 GGTTCAATTCCCGGCCGGGGAG 29762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652691242742480