Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20japonica_20[genbank_20GCA_5F000147155.1_202010-09- 24] 18,817 sequences; 166,256,191 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq17432 100 3e-16 >seq17432 Length=65892 Score = 100 bits (110), Expect = 3e-16 Identities = 115/152 (76%), Gaps = 2/152 (1%) Strand=Plus/Plus Query 146907 CAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTG 146966 |||||| |||||| | ||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 2982 CAGCTGCGTTTTCAACGCATCCACGTGGTTCGAGTAAACGTGCGCGTCACCCAGAGTGTG 3041 Query 146967 CA-CAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGT 147025 | |||||| |||| ||| || ||| ||| | ||| | ||||| |||||||| || Sbjct 3042 TACCAAAGT-TCCCGCCTTCAGACCGCACACTTTGGCAATCATGTGAGTGAGCAGTCCGT 3100 Query 147026 AGCTGGCTATGTTGAAGGGGACCCCCAGGCCC 147057 ||||||| | ||||| || || || |||||| Sbjct 3101 AGCTGGCCAGATTGAATGGTACGCCGAGGCCC 3132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583350756328800