Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq3 118 1e-21 seq1153 93.3 5e-14 seq5 93.3 5e-14 seq4 93.3 5e-14 seq2 93.3 5e-14 seq1411 87.8 2e-12 seq6 87.8 2e-12 >seq3 Length=15630833 Score = 118 bits (130), Expect = 1e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | ||||||||| | ||| |||||| || || ||||| || | Sbjct 4184801 TCCTCCTCTGAGACGGAGCACCAAATGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 4184742 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| | | || || |||||||| || ||||| ||||||| |||||| || | || Sbjct 4184741 AAGAGTTCTTCCATCCTCCAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGATCTGGTGG 4184682 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | ||||||||| ||| || ||||| || | | ||||| | |||||| Sbjct 4184681 GATTCCCTCCTTGTCTTGGATCTTGGCTTTGACATTCTCGATTGTGTCAGAAGCTTCCAC 4184622 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | |||||||| || || || || ||||| || ||||||||||| Sbjct 4184621 TTCCAAAGTGATGGTCTTTCCGGTGAGGGTCTTGACGAAGATTTGCAT 4184574 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | ||| | |||||| || | ||| |||||| || || ||||| || | Sbjct 4183834 TCCTCCTCTGAGACGGAGCACCAAGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 4183775 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 ||||| | |||| || |||||||| || ||||| ||||||| ||||||||| | || Sbjct 4183774 AAGAGTTCTTCCGTCCTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGGTCTGGTGG 4183715 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCAC 43135 | | |||||||| |||||| ||||| || | | || ||| | ||||| Sbjct 4183714 GATTCCTTCCTTGTCTTGGATTTTGGCTTTGACATTCTCGATGGTATCGGAAGCCTCCAC 4183655 Query 43136 ATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCAT 43183 || | ||||| ||||| || || | ||| || || ||||||||||| Sbjct 4183654 CTCCAGGGTGATAGTTTTTCCTGTCAACGTTTTGACGAAGATTTGCAT 4183607 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 ||||||||| || ||||| || | || ||| || |||| || |||||||| |||||||| Sbjct 4186227 CTCCTTTTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCGAGCTGCTTTCCAGCGAA 4186168 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGT 43111 || | ||||||||||| | || | | |||||||| |||||| |||| | Sbjct 4186167 GATCAAGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTGACATT 4186108 Query 43112 CGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTAC 43171 | | | ||||| | || || || | |||||||| || || || || ||||| || Sbjct 4186107 CTCGATGGTGTCAGAAGCCTCGACTTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGAC 4186048 Query 43172 AAAGATTTGCAT 43183 |||||| ||||| Sbjct 4186047 AAAGATCTGCAT 4186036 Score = 84.2 bits (92), Expect = 3e-11 Identities = 158/230 (69%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 42956 TCCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGC 43015 ||||||||| | || | ||||| || | || ||||| || || ||||| || | Sbjct 4184062 TCCTCCTCTGAGGCGGAGAACCAAGTGAAGAGTCGATTCCTTCTGGATGTTGTAGTCCGA 4184003 Query 43016 CAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGG 43075 || || || | || || |||||||| || ||||| ||||||| |||||| || | || Sbjct 4184002 GAGGGTACGTCCATCCTCAAGCTGCTTTCCGGCGAAGATGAGTCTCTGCTGATCTGGTGG 4183943 Query 43076 CACGCTCTCCTTGTCCATGATTTTTTGT-TTGAGCGTCGCCACCGTGTCGCTCGATTCCA 43134 | | ||||||||| ||| | || | |||| || | | || ||| | || | Sbjct 4183942 GATTCCCTCCTTGTCT-TGAATCTTGGCCTTGACATTCTCAATGGTATCGGAAGCCTCGA 4183884 Query 43135 CATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATT 43184 | || | |||||||| || || || || ||||| || |||||||||||| Sbjct 4183883 CCTCCAAAGTGATGGTCTTTCCAGTGAGTGTCTTGACGAAGATTTGCATT 4183834 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 43040 CTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTT 43099 |||||||||||| ||||||| ||||||||| | || | | |||||||||| ||| || Sbjct 4184945 CTTACCAGCGAAGATGAGTCTCTGCTGGTCTGGTGGAATTCCCTCCTTGTCCTGGATCTT 4184886 Query 43100 TTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGT 43159 ||||| || | | ||||| | ||| || |||| ||||| || || || || Sbjct 4184885 GGCTTTGACATTCTCAATGGTGTCCGAAGCTTCAACTTCGAGGGTGATCGTCTTTCCGGT 4184826 Query 43160 TAGCGTCTTTACAAAGATTTGCATT 43184 | |||||| || ||||| |||||| Sbjct 4184825 CAACGTCTTGACGAAGATCTGCATT 4184801 >seq1153 Length=18850 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 503 AAAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 562 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 563 TCACCACTATACTACCGAGGA 583 >seq5 Length=22087214 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| |||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1360756 AAAAGTTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1360697 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1360696 TCACCACTATACTACCGAGGA 1360676 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 3831944 AAAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 3832003 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 3832004 TCACCACTATACTACCGAGGA 3832024 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14459033 AAAAATATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14459092 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 14459093 TCACCACTATACTACCGAGGA 14459113 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 19807767 AAAAATATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 19807708 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 19807707 TCACCACTATACTACCGAGGA 19807687 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60056 GAAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| |||||| |||| |||||| |||||| |||||| | ||||||| || ||| Sbjct 3838323 GAAAAAAATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATA 3838382 Query 60116 CTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||| Sbjct 3838383 CTCACCACTATACTACCGAGGA 3838404 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 16387979 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 16387920 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 16387919 TCACCACTATACTACCGAGGA 16387899 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 17313580 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 17313639 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 17313640 TCACCACTATACTACCGAGGA 17313660 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| |||||| |||||| |||||| | ||||||| || ||||||||||| Sbjct 16386654 TTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCAC 16386595 Query 60124 TATACTACCGAGGA 60137 |||||||||||||| Sbjct 16386594 TATACTACCGAGGA 16386581 >seq4 Length=19682253 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14437284 AAAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14437343 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 14437344 TCACCACTATACTACCGAGGA 14437364 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18288516 AAAAAGTTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18288457 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18288456 TCACCACTATACTACCGAGGA 18288436 Score = 89.7 bits (98), Expect = 6e-13 Identities = 69/82 (84%), Gaps = 0/82 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14750601 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14750660 Query 60117 TCACCACTATACTACCGAGGAT 60138 |||||||||||||||||||||| Sbjct 14750661 TCACCACTATACTACCGAGGAT 14750682 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18053 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18112 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18113 TCACCACTATACTACCGAGGA 18133 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1336787 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1336728 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1336727 TCACCACTATACTACCGAGGA 1336707 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 12975434 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 12975493 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 12975494 TCACCACTATACTACCGAGGA 12975514 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14738462 AAAACATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14738521 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 14738522 TCACCACTATACTACCGAGGA 14738542 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14743784 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14743843 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 14743844 TCACCACTATACTACCGAGGA 14743864 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14746764 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14746823 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 14746824 TCACCACTATACTACCGAGGA 14746844 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18040403 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18040344 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18040343 TCACCACTATACTACCGAGGA 18040323 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18274641 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18274582 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18274581 TCACCACTATACTACCGAGGA 18274561 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18276634 AAAAAAATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18276575 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18276574 TCACCACTATACTACCGAGGA 18276554 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18292060 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18292001 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18292000 TCACCACTATACTACCGAGGA 18291980 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18295177 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18295118 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18295117 TCACCACTATACTACCGAGGA 18295097 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 18888885 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 18888944 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 18888945 TCACCACTATACTACCGAGGA 18888965 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAATT-TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| |||||| |||| |||||| |||||| |||||| | ||||||| || ||| Sbjct 18290307 AAAAATGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATA 18290248 Query 60116 CTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||| Sbjct 18290247 CTCACCACTATACTACCGAGGA 18290226 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 1339538 AAAACATCTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 1339479 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 1339478 TCACCACTATACTACCGAGGA 1339458 Score = 84.2 bits (92), Expect = 3e-11 Identities = 63/74 (85%), Gaps = 0/74 (0%) Strand=Plus/Plus Query 60064 TTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATACTCACCAC 60123 |||||| |||| |||||| |||||| |||||| | ||||||| || ||||||||||| Sbjct 18777407 TTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATACTCACCAC 18777466 Query 60124 TATACTACCGAGGA 60137 |||||||||||||| Sbjct 18777467 TATACTACCGAGGA 18777480 >seq2 Length=17838644 Score = 93.3 bits (102), Expect = 5e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 2444685 AAAAAATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 2444626 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 2444625 TCACCACTATACTACCGAGGA 2444605 Score = 91.5 bits (100), Expect = 2e-13 Identities = 70/82 (85%), Gaps = 1/82 (1%) Strand=Plus/Minus Query 60057 AAAAAT-TTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATA 60115 |||||| ||||||| |||| |||||| |||||| |||||| | ||||||| || ||| Sbjct 2423498 AAAAATATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATA 2423439 Query 60116 CTCACCACTATACTACCGAGGA 60137 |||||||||||||||||||||| Sbjct 2423438 CTCACCACTATACTACCGAGGA 2423417 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 2426459 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 2426400 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 2426399 TCACCACTATACTACCGAGGA 2426379 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 14555655 AAAAAAATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 14555596 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 14555595 TCACCACTATACTACCGAGGA 14555575 >seq1411 Length=14371 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 ||||| |||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 6386 AAAAAGATTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 6327 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 6326 TCACCACTATACTACCGAGGA 6306 Score = 84.2 bits (92), Expect = 3e-11 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| | ||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 11514 AAAACATCTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 11455 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 11454 TCACCACTATACTACCGAGGA 11434 >seq6 Length=24575218 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 4708539 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 4708598 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 4708599 TCACCACTATACTACCGAGGA 4708619 Score = 87.8 bits (96), Expect = 2e-12 Identities = 68/81 (84%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 60057 AAAAATTTTCTCCTCGGCAGGGAATCGAACCCTGGTCTCCCGCGTGACAGGCGGACATAC 60116 |||| ||||||| |||| |||||| |||||| |||||| | ||||||| || |||| Sbjct 9311651 AAAAGATTTCTCCCCGGCCGGGAATTGAACCCGGGTCTCGCATGTGACAGACGCGGATAC 9311592 Query 60117 TCACCACTATACTACCGAGGA 60137 ||||||||||||||||||||| Sbjct 9311591 TCACCACTATACTACCGAGGA 9311571 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571794377057720