Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_004688.1 Length=110865 Score E Sequences producing significant alignments: (Bits) Value seq1669 93.3 3e-14 >seq1669 Length=8647 Score = 93.3 bits (102), Expect = 3e-14 Identities = 78/96 (81%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 99387 GTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 99446 |||| |||||| ||||| || | ||| ||||| || || |||||||| ||||||| || Sbjct 6639 GTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGGCGCTGCGTGGCCAGGATCAG 6580 Query 99447 ATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCG 99482 || ||||||||||||||||||||||| || | ||| Sbjct 6579 GTGGATGCCGGCCGCACGCGCCTTCTGTGCCAGGCG 6544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 354629157126714