Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_012223.2 Length=44899 Score E Sequences producing significant alignments: (Bits) Value seq1878 80.6 8e-11 >seq1878 Length=10347 Score = 80.6 bits (88), Expect = 8e-11 Identities = 76/96 (79%), Gaps = 2/96 (2%) Strand=Plus/Plus Query 14566 GCGTTCGCTAAGGGCGCAGGATTGATGGGTGAGGCTGGACCCGAGGCCATCATGCCACTG 14625 || ||||| ||||||||||| | | | |||||||| || || || |||||||| ||| Sbjct 3435 GCCTTCGCGAAGGGCGCAGGTGTCTTTGCCGAGGCTGGCCCTGAAGCAATCATGCCGCTG 3494 Query 14626 AAGCGCGGGCCGGACGGGAAACTTGGCGTTGCCGCG 14661 ||||||| ||||||||||| ||||| || ||||| Sbjct 3495 AAGCGCGCGCCGGACGGGAGTCTTGGTGT--CCGCG 3528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 143549661371218