Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq3 183 1e-40 seq2 118 4e-21 seq5 100 1e-15 seq1 93.3 2e-13 >seq3 Length=15630833 Score = 183 bits (202), Expect = 1e-40 Identities = 262/366 (72%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| |||||||| ||||| ||||| ||| | Sbjct 6136804 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCT 6136745 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | |||| | |||||||| |||||||| || || || |||||||| || | Sbjct 6136744 GGGACATGCAGTCAAGGATGCAGTGATTACTGTACCTGCATACTTCAATGACAGTCAGAG 6136685 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| |||||||| | |||| | ||||| || ||||| Sbjct 6136684 ACAAGCAACCAAAGATGCAGCTACCATTGCTGGACTCAATGCCATCCGAATCATCAATGA 6136625 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaa 451480 ||| || ||||||||||| || |||||| | ||| ||| ||| || ||||| || Sbjct 6136624 ACCGACTGCAGCTGCTCTTGCTTATGGA-TTGGA----TAAAGGAATCAGTGAAGAGAAG 6136570 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||| |||| | |||||| |||| ||||| ||| |||| ||| | |||||||||| Sbjct 6136569 AATGTTTTGATCTTTGATCTTGGAGGAGGTACTTTTGATGTTTCAATCCTTTCAATTGCT 6136510 Query 451541 GATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || | || ||||| || | || ||| ||||||||||| ||||| || ||| Sbjct 6136509 GAAGGATCAATCTTCGAAGTCAAATCCACAGCTGGAGATACTCATCTTGGAGGAGAGGAT 6136450 Query 451598 ATTGAT 451603 | ||| Sbjct 6136449 TTCGAT 6136444 Score = 183 bits (202), Expect = 1e-40 Identities = 262/366 (72%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| ||| | ||||| ||| |||||||| ||||| ||||| ||| | Sbjct 6304918 TCCAGAAGAAATCTCAGCAATGGTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCT 6304859 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | |||| | |||||||| |||||||| || || || |||||||| || | Sbjct 6304858 GGGACATGCAGTCAAGGATGCAGTGATTACTGTACCTGCATACTTCAATGACAGTCAGAG 6304799 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| |||||||| | |||| | ||||| || ||||| Sbjct 6304798 ACAAGCAACCAAAGATGCAGCTACCATTGCTGGACTCAATGCCATCCGAATCATCAATGA 6304739 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaa 451480 ||| || ||||||||||| || |||||| | ||| ||| ||| || ||||| || Sbjct 6304738 ACCGACTGCAGCTGCTCTTGCTTATGGA-TTGGA----TAAAGGAATCAGTGAAGAGAAG 6304684 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||| |||| | |||||| |||| ||||| ||| |||| ||| | |||||||||| Sbjct 6304683 AATGTTTTGATCTTTGATCTTGGAGGAGGTACTTTTGATGTTTCAATCCTTTCAATTGCT 6304624 Query 451541 GATGG---GGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || | || ||||| || | || ||| ||||||||||| ||||| || ||| Sbjct 6304623 GAAGGATCAATCTTCGAAGTCAAATCCACAGCTGGAGATACTCATCTTGGAGGAGAGGAT 6304564 Query 451598 ATTGAT 451603 | ||| Sbjct 6304563 TTCGAT 6304558 Score = 174 bits (192), Expect = 6e-38 Identities = 327/474 (69%), Gaps = 14/474 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG--TT 452048 ||||| ||||||||||| |||| ||| ||||| || ||||| ||| |||| | || || Sbjct 8107555 AATCCAGATGAAGCTGTCGCATTTGGAGCTGCTGTCCAAGCCGCTGTTCTTTCTGGAATT 8107496 Query 452049 CAGATGATGAAA-AATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGA 452107 || ||| ||| ||| | | ||| | || | || ||||| | ||||| |||||| Sbjct 8107495 CAA--GATCAAACAATCAAG-GATGTCTTGCTGGTTGATGTTGCCCCTCTGAGCCTTGGA 8107439 Query 452108 GTTGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGT 452167 |||| || |||||||| |||||||||| | ||| | || || | ||||| Sbjct 8107438 ATTGAGACTGCTGGTGGTGTGATGACTAACATCATTGATCGCAACACCACAATTCC---- 8107383 Query 452168 AA--AAAGAGTCAAACA--TTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCA 452223 || |||| || || | || | ||| ||| ||||| ||||| ||| | || || Sbjct 8107382 AACCAAAGCTTCCAAGACCTTCACTACCTACGCTGACAACCAGCCAGGAGTATCCATCCA 8107323 Query 452224 AGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCT 452283 ||||| ||||||||||||||| ||||| || || || || || ||| ||| || Sbjct 8107322 AGTGTATGAAGGAGAACGTGCGATGACTCGTGACAACCATCGTCTTGGAACATTCGAACT 8107263 Query 452284 TTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGA 452343 ||| ||||| ||| ||| | || ||| || ||||| | |||| ||| | || Sbjct 8107262 TTCCGGAATTCCACCTGCTCCACGCGGTGTTCCACAGATTGATGTCACCTTTGACATCGA 8107203 Query 452344 TGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAAT 452403 ||||||||| ||||| |||||| || ||||| || ||| |||||||||| | ||||| Sbjct 8107202 TGCAAATGGAATTCTGAATGTGTCGGCTGTTGACAAGTCAACTGGAAAATCCAACAAAAT 8107143 Query 452404 TACAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGT 452457 || ||| || || ||| || || || ||| |||||||| |||||| Sbjct 8107142 CACTATTCAAAACGAGAAAGGACGGTTGTCGCAAGCTGATATTGATCGAATGGT 8107089 Score = 168 bits (186), Expect = 3e-36 Identities = 349/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGGT-TC 452049 ||||| |||||||||||||||| || |||||||||||||||||| | || | || || Sbjct 5703925 AATCCAGATGAAGCTGTTGCATTCGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTC 5703866 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | ||| ||| | | |||| | || | || ||||| | || || ||||||| | Sbjct 5703865 A-AGGATCAAACAATCAAAGATGTATTGCTGGTTGATGTTGCTCCACTGAGTCTTGGAAT 5703807 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || ||||||||||| ||||||| ||| | ||| | ||| || ||||| | Sbjct 5703806 CGAGACAGCTGGTGGTGTGATGACCAATCTCATTGATCGAAACACCAGAATTCC--AACA 5703749 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || | || ||||||| | ||| ||||| ||||||||||| | |||||||| Sbjct 5703748 AAGGCATCGAAAACATTCACTACTTATGCCGATAATCAACCAGGTGTCTCAATTCAAGTA 5703689 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | |||||||||||||| ||||| || ||||| || || ||| ||| | || | Sbjct 5703688 TACGAAGGAGAACGTGCGATGACTCGGGATAACCATCGTCTTGGAACATT--CGAATTGA 5703631 Query 452288 --AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 ||||| || ||| | || |||||| |||||| | || | ||| | |||| Sbjct 5703630 GTGGAATTCCACCAGCTCCACGTGGTGTTCCTCAGATTGAAGTCACTTTTGACATCGATG 5703571 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 | ||||| ||||| |||||| || | || ||||| |||||||| | | || | Sbjct 5703570 CCAATGGAATTCTGAATGTGTCGGCTGAGGATAAATCGACTGGAAAAACGAATCGGATCA 5703511 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || || ||| || ||| ||||| |||||| | || | Sbjct 5703510 CAATTCGAAATGAGAAAGGACGATTGTCTCAATCAGACATTGATCGAATGGTTAACGAGG 5703451 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAA 452494 || || ||||| ||||| |||| |||||| Sbjct 5703450 CAAAACAATTCGAAAAGGAAGATGGAGAACAA 5703419 Score = 159 bits (176), Expect = 1e-33 Identities = 257/366 (70%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| |||||||| || | ||||| ||| |||||||| ||||| ||||| ||| | Sbjct 5704673 TCCAGAAGAAATCTCGGCAATGGTACTTCAGAAAATGAAGGAAACTGCAGAGACATACCT 5704614 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 || | |||| | |||||||| |||||||| || || || |||||||| || | Sbjct 5704613 GGGACATGCAGTCAAGGATGCAGTGATTACTGTACCTGCATACTTCAATGACAGTCAGAG 5704554 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 |||||||| |||||||||| |||||||| | |||| | ||||| || || || Sbjct 5704553 ACAAGCAACCAAAGATGCAGCTACCATTGCTGGACTCAATGCCATCCGAATCATCAACGA 5704494 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACA--GAAGaaaaa 451480 ||| || ||||||||||| || |||||| | ||| ||| ||| || ||||| || Sbjct 5704493 ACCGACTGCAGCTGCTCTTGCTTATGGA-TTGGA----TAAAGGAATCAGTGAAGAGAAG 5704439 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAAT---T 451537 ||| | | | |||||| |||| ||||| ||| |||| ||| | |||||||| | Sbjct 5704438 AATGTACTGATCTTTGATCTTGGAGGAGGTACTTTTGATGTTTCCATCCTTTCAATCGCT 5704379 Query 451538 GAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 |||| | || ||||| || | || ||| ||||||||||| ||||| || ||| Sbjct 5704378 GAAGGATCAATCTTCGAAGTCAAATCCACTGCTGGAGATACTCATCTTGGAGGAGAGGAT 5704319 Query 451598 ATTGAT 451603 | ||| Sbjct 5704318 TTCGAT 5704313 Score = 156 bits (172), Expect = 2e-32 Identities = 346/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG-TTC 452049 ||||| |||||||||||||||| || |||||||||||||||||| | || | || || Sbjct 6136056 AATCCAGATGAAGCTGTTGCATTCGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTC 6135997 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | ||| ||| | | |||| | || | || ||||| | || | ||||||| | Sbjct 6135996 A-AGGATCAAACAATCAAAGATGTATTGCTGGTTGATGTTGCTCCATTGAGTCTTGGAAT 6135938 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || ||||||||||| ||||||| ||| | ||| | ||| || ||||| | Sbjct 6135937 CGAGACAGCTGGTGGTGTGATGACCAATCTCATTGATCGAAACACCAGAATTCC--AACA 6135880 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || | || |||| || | ||| ||||| |||||||| || | |||||||| Sbjct 6135879 AAGGCATCGAAAACTTTCACTACTTATGCCGATAATCAACCAGGAGTCTCAATTCAAGTA 6135820 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | |||||||||||||| ||||| || ||||| || || ||| ||| | || | Sbjct 6135819 TACGAAGGAGAACGTGCGATGACTCGGGATAACCATCGTCTTGGAACATT--CGAATTGA 6135762 Query 452288 --AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 ||||| || ||| | || |||||| |||||| | || | ||| | |||| Sbjct 6135761 GTGGAATTCCACCAGCTCCACGTGGTGTTCCTCAGATTGAAGTCACTTTTGACATCGATG 6135702 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 | ||||| ||||| |||||| || | || ||||| |||||||| | | || | Sbjct 6135701 CCAATGGAATTCTGAATGTGTCGGCTGAGGATAAATCGACTGGAAAAACGAATCGGATCA 6135642 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || || ||| || ||| ||||| |||||| | || | Sbjct 6135641 CAATTCGAAATGAGAAAGGACGATTGTCTCAATCAGACATTGATCGAATGGTTAACGAGG 6135582 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAA 452494 || || ||||| ||||| |||| |||||| Sbjct 6135581 CAAAACAATTCGAAAAGGAAGATGGAGAACAA 6135550 Score = 156 bits (172), Expect = 2e-32 Identities = 346/512 (68%), Gaps = 13/512 (3%) Strand=Plus/Minus Query 451991 AATCCTGATGAAGCTGTTGCATATGGTGCTGCAGTTCAAGCAGCTATTCTAACAGG-TTC 452049 ||||| |||||||||||||||| || |||||||||||||||||| | || | || || Sbjct 6304170 AATCCAGATGAAGCTGTTGCATTCGGAGCTGCAGTTCAAGCAGCTGTACTTTCTGGAGTC 6304111 Query 452050 AGATGATGAAAAATTAGGAGATATTCTGTTAGTAGATGTAACACCTCTATCTCTTGGAGT 452109 | | ||| ||| | | |||| | || | || ||||| | || | ||||||| | Sbjct 6304110 A-AGGATCAAACAATCAAAGATGTATTGCTGGTTGATGTTGCTCCATTGAGTCTTGGAAT 6304052 Query 452110 TGAAACAGCTGGTGGAATGATGACTAATTTAATTAAACGAGGAACTTCTATTCCTTGTAA 452169 || ||||||||||| ||||||| ||| | ||| | ||| || ||||| | Sbjct 6304051 CGAGACAGCTGGTGGTGTGATGACCAATCTCATTGATCGAAACACCAGAATTCC--AACA 6303994 Query 452170 AAAGAGTC--AAACATTTAGTACAGCAAGTGATAACCAACCAGGTGTAACTATTCAAGTG 452227 || | || |||| || | ||| ||||| |||||||| || | |||||||| Sbjct 6303993 AAGGCATCGAAAACTTTCACTACTTATGCCGATAATCAACCAGGAGTCTCAATTCAAGTA 6303934 Query 452228 TTTGAAGGAGAACGTGCAATGACACGAGATAATAATAAACTAGGAGAATTTACTCTTTCA 452287 | |||||||||||||| ||||| || ||||| || || ||| ||| | || | Sbjct 6303933 TACGAAGGAGAACGTGCGATGACTCGGGATAACCATCGTCTTGGAACATT--CGAATTGA 6303876 Query 452288 --AACATTCCTCCTATGCCAAGGGGAACTCCTCAAATTGAAATTACCTATGATGTTGATG 452345 ||||| || ||| | || |||||| |||||| | || | ||| | |||| Sbjct 6303875 GTGGAATTCCACCAGCTCCACGTGGTGTTCCTCAGATTGAAGTCACTTTTGACATCGATG 6303816 Query 452346 CAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAATCATCTGGAAAATCAGAAAAAATTA 452405 | ||||| ||||| |||||| || | || ||||| |||||||| | | || | Sbjct 6303815 CCAATGGAATTCTGAATGTGTCGGCTGAGGATAAATCGACTGGAAAAACGAATCGGATCA 6303756 Query 452406 CAATTACTAATGATAAAAACCGTTTATCTAAAGAAGATATTGAAAAAATGGTAGATGAAG 452465 ||||| ||||| ||| || || ||| || ||| ||||| |||||| | || | Sbjct 6303755 CAATTCGAAATGAGAAAGGACGATTGTCTCAATCAGACATTGATCGAATGGTTAACGAGG 6303696 Query 452466 CAGAAAAATTC---AAGGATGATGATGAACAA 452494 || || ||||| ||||| |||| |||||| Sbjct 6303695 CAAAACAATTCGAAAAGGAAGATGGAGAACAA 6303664 Score = 116 bits (128), Expect = 1e-20 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || ||||| || || |||||||| || || || ||||| || || ||| | || Sbjct 4185531 AATGCAGATCTTCGTCAAGACTCTGACTGGAAAGACCATCACTCTCGAGGTCGAAGCTTC 4185590 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||| ||| |||| || || || |||||||||||||| || || || || Sbjct 4185591 TGACACCATCGAAAACGTTAAGGCCAAGATCCAGGATAAGGAAGGAATCCCACCAGACCA 4185650 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 |||| | | || ||| | ||||| ||| | |||||||| |||||| || ||||||| || Sbjct 4185651 ACAAAGACTCATCTTCGCCGGGAAGCAATTGGAAGATGGTAGAACTCTGTCGGATTACAA 4185710 Query 391229 TATTGATAAGGA 391240 || | ||||| Sbjct 4185711 CATCCAAAAGGA 4185722 Score = 113 bits (124), Expect = 2e-19 Identities = 148/205 (72%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || ||||| || ||||| ||||| || |||||| | || Sbjct 4184345 AATGCAGATTTTCGTGAAAACTCTTACTGGAAAGACTATCACTCTAGAGGTTGAAGCCTC 4184404 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | |||||| | ||| || || || || |||||||||||||| || ||||| Sbjct 4184405 GGACACTATTGAAAACGTCAAAGCCAAGATCCAGGACAAGGAAGGAATTCCACCAGATCA 4184464 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| | ||||| || ||||| ||||| | || | |||| || || Sbjct 4184465 GCAAAGATTGATCTTCGCCGGGAAGCAGCTTGAGGATGGTCGTACCCTCTCGGACTACAA 4184524 Query 391229 TATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || |||||| Sbjct 4184525 CATCCAGAAGGAGTCTACTCTTCAC 4184549 Score = 105 bits (116), Expect = 3e-17 Identities = 163/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || || || || || || || ||| | || || ||| | || Sbjct 4185304 ATGCAGATCTTCGTCAAGACGCTTACCGGAAAGACCATCACTTTGGAAGTCGAAGCTTCG 4185363 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | |||||| | | ||| ||||| ||||| ||||||||||| || || ||||| Sbjct 4185364 GACACCATTGAGAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCGCCAGATCAG 4185423 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||||| || || ||| | || || || ||||| |||||| | || ||| | || || || Sbjct 4185424 CAACGATTGATCTTCGCTGGAAAGCAGCTTGAGGATGGACGTACCTTGTCCGACTACAAC 4185483 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || | ||||| | || || ||||| || | | || |||||| ||| || Sbjct 4185484 ATCCAGAAGGAGTCCACTCTCCACTTGGTGCTCCGTCTCAGAGGAGGAATGCA 4185536 Score = 105 bits (116), Expect = 3e-17 Identities = 245/366 (67%), Gaps = 10/366 (3%) Strand=Plus/Minus Query 451243 TCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATAT 451302 ||| || ||||| ||| | ||| | ||| || ||||| ||||| || || || | Sbjct 8108357 TCCAGAGGAAATCTCAGCAATGATCCTTCAGAAGATGAAGGAAACTGCGGAGACGTACCT 8108298 Query 451303 TGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACG 451362 ||| |||| | ||||| || ||||| || || || |||||||| ||| || | Sbjct 8108297 TGGACACGCAGTCAAAGATGCTGTTATTACGGTACCAGCATATTTCAACGATAGTCAGAG 8108238 Query 451363 GCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGA 451422 ||||| || || ||||||| || ||||| | |||| | ||||| || ||||| Sbjct 8108237 ACAAGCCACCAAGGATGCAGCTACCATCGCTGGACTCAATGCCATCCGAATCATCAATGA 8108178 Query 451423 ACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAA--CAGAAGaaaaa 451480 || || |||||||| || || || ||| | ||| ||| ||| | || || || Sbjct 8108177 GCCAACTGCAGCTGCCCTCGCTTACGGATT-GGA----CAAGGGAATTTCCGACGAGAAG 8108123 Query 451481 aaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAA 451540 ||| || | | || || |||| ||||| || |||| |||||| ||| | |||| Sbjct 8108122 AATGTTCTGATCTTCGACCTTGGAGGAGGTACCTTTGATGTTTCTGTCCTTACCATTGCT 8108063 Query 451541 GATGGGG---TATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGAT 451597 || || | || ||||| ||| |||| ||| ||||||||||| || || || || Sbjct 8108062 GAAGGATCCATCTTCGAAGTCAAGTCAACTGCTGGAGATACTCATCTTGGTGGAGAGGAC 8108003 Query 451598 ATTGAT 451603 ||||| Sbjct 8108002 TTTGAT 8107997 Score = 102 bits (112), Expect = 3e-16 Identities = 164/236 (69%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 || ||| | || ||||| ||||| |||| || |||||||| || || || || || | Sbjct 4183604 ATCATGCAAATCTTCGTCAAAACGTTGACAGGAAAAACTATCACCCTGGAGGTGGAGGCT 4183663 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 || |||| ||| || | | ||| ||||| ||||| ||||||||||| || || || Sbjct 4183664 TCCGATACCATCGAGAATGTCAAAGCCAAAATCCAAGACAAGGAAGGAATCCCACCAGAC 4183723 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 || || | | || ||| | || || || ||||| || ||||||||| | |||| || Sbjct 4183724 CAGCAGAGACTCATCTTCGCCGGAAAGCAGCTTGAGGACGGAAGAACTCTTTCGGACTAC 4183783 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || || | ||||| | || || ||||| || | | || |||||| ||| || Sbjct 4183784 AACATCCAGAAGGAGTCCACTCTCCACTTGGTGCTCCGTCTCAGAGGAGGAATGCA 4183839 Score = 93.3 bits (102), Expect = 2e-13 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||| ||||| || ||||| || || || || | || Sbjct 1644094 ATGCAAATCTTCGTCAAGACTCTGACGGGTAAGACAATTACCCTCGAAGTCGAGGCCTCC 1644035 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||| || | | || || || ||||| |||||||||||||| || || || Sbjct 1644034 GATACCATCGAGAATGTCAAGGCTAAGATCCAAGACAAGGAAGGAATTCCACCAGACCAG 1643975 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 ||| | || || ||| | || || ||||| || |||||| | ||| | | || || || Sbjct 1643974 CAAAGATTGATCTTCGCCGGAAAGCAACTCGAGGATGGACGTACTCTCTCCGACTACAAC 1643915 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGT 391258 || | ||||| | || || ||||| || Sbjct 1643914 ATCCAGAAGGAGTCCACTCTCCACTTGGT 1643886 >seq2 Length=17838644 Score = 118 bits (130), Expect = 4e-21 Identities = 241/355 (68%), Gaps = 6/355 (2%) Strand=Plus/Minus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||| |||||| |||| ||||||| || ||||| ||||| ||| || ||| || Sbjct 6214656 CTCCAGAAGAAGTTTCGGCTATGGTCCTCACTAAGATGAAGCAAATTGCTGAATCCTACC 6214597 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 |||| ||| | | || || | || ||||| ||||| ||||||||||| || Sbjct 6214596 TTGGACACGAAGTGAAGAACGCTGTCGTCACCGTTCCAGCTTACTTCAATGATGCCCAGA 6214537 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || ||||| || ||| ||| ||||| | || ||| | |||| || || | Sbjct 6214536 GACAAGCCACCAAAGACGCCGGAACTATCGCTGGACTTAACGTTGTCAGAATCATCAACG 6214477 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || |||||| | || || || || ||| || || || || ||||| || Sbjct 6214476 AACCAACTGCTGCTGCTATTGCTTACGG-CTTGGACAA--GAAGGA---AGGAGAAAGAA 6214423 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 | ||| | || || || || || || || ||| ||| ||| | || | || || Sbjct 6214422 ACATTCTCGTTTTCGACTTGGGAGGTGGTACTTTCGATGTTTCGCTTCTCACTATCGACA 6214363 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGA 451596 | || || || ||||| || ||||| || |||||||| | ||||| ||||| Sbjct 6214362 ACGGAGTTTTCGAAGTTCTTGCCACCAACGGAGATACTCACTTGGGAGGAGAAGA 6214308 >seq5 Length=22087214 Score = 100 bits (110), Expect = 1e-15 Identities = 136/190 (72%), Gaps = 0/190 (0%) Strand=Plus/Plus Query 451265 GTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 || |||| || ||||||||||| || ||| ||| | ||| | | || | | || Sbjct 2324029 GTGCTTATGAAGATGAAAGAAACCGCTGAAAGCTATTTGGGTACCACCGTCAACAACGCC 2324088 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || |||||||||| || || ||||| ||| | ||||| ||||| || || ||||| ||| Sbjct 2324089 GTTGTTACTGTTCCAGCCTACTTCAACGATTCTCAACGTCAAGCCACCAAGGATGCTGGA 2324148 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || ||| |||| | || |||||||| | || || || || || || || ||||| || Sbjct 2324149 CAAATTTCTGGACTCAACGTTCTTCGTGTGATCAACGAGCCAACTGCCGCCGCTCTTGCT 2324208 Query 451445 TATGGACTAG 451454 || ||| ||| Sbjct 2324209 TACGGATTAG 2324218 >seq1 Length=16658584 Score = 93.3 bits (102), Expect = 2e-13 Identities = 102/136 (75%), Gaps = 0/136 (0%) Strand=Plus/Minus Query 451319 GATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGAT 451378 |||||||| ||||| || ||||| |||||||||||| ||||| ||||| || || || Sbjct 1912855 GATGCAGTGATTACAGTACCCGCATATTTCAATGATAGCCAACGTCAAGCTACGAAGGAC 1912796 Query 451379 GCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCT 451438 |||| ||||||||| | || | ||||||| || ||||| || || ||||| || Sbjct 1912795 GCAGCTACCATTGCTGGTCTCAACGCGATTCGAATCATCAATGAGCCAACTGCAGCCGCA 1912736 Query 451439 CTAGCATATGGACTAG 451454 | || |||||| ||| Sbjct 1912735 TTGGCTTATGGATTAG 1912720 Score = 91.5 bits (100), Expect = 6e-13 Identities = 147/209 (70%), Gaps = 2/209 (1%) Strand=Plus/Plus Query 451247 GAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGT 451306 || || |||||| | ||||| ||| || ||||| ||| || || |||| | || Sbjct 1065517 GAGGAGATTTCAGCAATGGTGCTTCAAAAGATGAAGAAAATTGCGGAGGCATATCTGGGG 1065576 Query 451307 TCTCCAGTT-ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCA 451365 | | || | | ||||| || ||||| || |||| |||||||||||| || | || Sbjct 1065577 -CACGAGGTCAAGGATGCGGTGATTACAGTACCCGTCTATTTCAATGATAGTCAGAGACA 1065635 Query 451366 AGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACC 451425 ||| || || || |||| ||||||||| | ||||| ||||||| || ||||| || Sbjct 1065636 AGCCACCAAGGACGCAGCTACCATTGCTGGTCTCAATGTCATTCGAATCATCAATGAGCC 1065695 Query 451426 TACAGCAGCTGCTCTAGCATATGGACTAG 451454 ||| ||||| || | || |||||| ||| Sbjct 1065696 TACTGCAGCCGCGTTGGCTTATGGATTAG 1065724 Score = 87.8 bits (96), Expect = 7e-12 Identities = 298/456 (65%), Gaps = 15/456 (3%) Strand=Plus/Minus Query 451089 AAAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTAC 451148 |||||||||| | |||| |||||| | || || ||| | || ||||| ||||| | Sbjct 1088229 AAAACACAGTTTCCAATGCAAAACGTCTTATCGGACGTCGTTTCGACGATGAAACTGTTC 1088170 Query 451149 AAAAAGAGAAAAAATTCTTTTCTTATGATGTAGTAAATC-AAAAAGGAAAGCCCTAT-AT 451206 || | | | ||| || | | || || || || ||||| | || ||| || || Sbjct 1088169 AAGATAACATCAAACACTGGCCATTTGCAGTC--AAGTCGAAAAACGGAACCCCCATGAT 1088112 Query 451207 TCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGT 451266 |||||| | ||||| |||| ||| || | | ||||| || ||| | ||||| Sbjct 1088111 TCAAGTGCAAGTCAAAGGAGAAAATAAGGAGTTCAATGCAGAAGAGATATCAGCGATGGT 1088052 Query 451267 TCTTACTAAAATGA--AAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCA 451324 ||| || |||| || | | ||||| || || || | ||| | |||||| Sbjct 1088051 GCTTCAGAAGATGAGGAATATCTCGGAGAACTATCTA--GGACATGAAGTCAAGGATGCA 1087994 Query 451325 GTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGA 451384 || ||||| || ||||| |||||||||||| || | ||||| || || || |||| Sbjct 1087993 GTTATTACAGTACCCGCCTATTTCAATGATAGTCAGAGACAAGCCACCAAGGACGCAGCT 1087934 Query 451385 CATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCA 451444 || |||||| | || ||||||| || ||||| || || ||||| || | || Sbjct 1087933 ACCATCGCTGGTCTCAACACGATTCGAATCATCAATGAGCCAACTGCAGCCGCGTTGGCT 1087874 Query 451445 TATGGACTAGGAAAATCAAAAGAA--ACAGAAGaaaaaaaTATTTTAGTATTTGATTTTG 451502 |||||| | | ||| | ||| |||| ||||| || | || | |||||||| | Sbjct 1087873 TATGGATTGG----ATC-GAGGAATCACAGGGGAAAAGAAAGTGTTGATTTTTGATTTGG 1087819 Query 451503 GTGGAGGAACTCATGATACTTCTGTACTTTCAATTG 451538 | || ||||| |||| || | ||||| |||| Sbjct 1087818 GAGGTGGAACATGTGATGTATCGATTCTTTCCATTG 1087783 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975636155164892