Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq3 87.8 2e-12 >seq3 Length=15630833 Score = 87.8 bits (96), Expect = 2e-12 Identities = 100/132 (76%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 102171 TCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCC 102230 || || || ||||| ||| |||| || || |||||||| ||||||||| || || Sbjct 12047997 TCGTTCGCCGAGCGGCTCATCGCGTTCGCTGCCGTTGAGGGCATCTTCTTCAGCGGCTCG 12047938 Query 102231 TTCTGCG-CTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAA 102289 ||| ||| | |||| |||||||||||||| ||||| |||||||| | | ||||| Sbjct 12047937 TTC-GCGTCGATTTTCTGGCTCAAGAAGCGCGGTCTGATGCCAGGATTGACCCATTCCAA 12047879 Query 102290 CGAGCTTATCTC 102301 |||||||||||| Sbjct 12047878 CGAGCTTATCTC 12047867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620717190099280