Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq3036 96.9 1e-15 >seq3036 Length=2695 Score = 96.9 bits (106), Expect = 1e-15 Identities = 110/148 (74%), Gaps = 0/148 (0%) Strand=Plus/Minus Query 13621 GCTGGTAGATCTCGGAGCGGTGGATGGCGACGTCGTCCGGGGCGGTGATGCCGAGGCGCA 13680 |||| |||||||| ||| || | |||||||| | ||| ||||||||||||| |||| Sbjct 2363 GCTGATAGATCTCTTCGCGATGCACAGCGACGTCCTTCGGCGCGGTGATGCCGATACGCA 2304 Query 13681 CCTGGTCGCCTTGGCTGCTGAGGACCGTGACGGTGATGTTGTCGCCGATATGCAGGGTTT 13740 |||||| || | | || || || |||||| | | ||| ||||| |||||||| Sbjct 2303 CCTGGTTACCCTTGACGCCAAGCACGGTGACGCTCACCGAGTCTCCGATCATCAGGGTTT 2244 Query 13741 CGCCGGGGCGGCGGGTCAAGATCAGCAT 13768 ||||| |||||| |||| ||||| ||| Sbjct 2243 CGCCGACGCGGCGAGTCAGGATCAACAT 2216 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157104338386186