Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq1911 96.9 4e-15 >seq1911 Length=5799 Score = 96.9 bits (106), Expect = 4e-15 Identities = 74/87 (85%), Gaps = 2/87 (2%) Strand=Plus/Plus Query 75942 TCTTGGTGGGCCTCCCCAGACTTGAACTGGGAACCAACGGATTATGAGTCCGCTGCTCTA 76001 ||||||| |||| ||| ||| | ||||| || |||||||||||||||||||||||||||| Sbjct 5565 TCTTGGTAGGCCCCCCGAGAGTCGAACTCGGCACCAACGGATTATGAGTCCGCTGCTCTA 5624 Query 76002 ACCA--ATTGAGCTAAAGGCCCAAAAA 76026 |||| ||||||| |||||| |||| Sbjct 5625 ACCAGGCATGAGCTAGAGGCCCTAAAA 5651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533248742555880