Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_019724.1 Length=43741 Score E Sequences producing significant alignments: (Bits) Value seq1878 80.6 7e-11 >seq1878 Length=10347 Score = 80.6 bits (88), Expect = 7e-11 Identities = 65/79 (82%), Gaps = 0/79 (0%) Strand=Plus/Plus Query 13868 GCGTTCGCTAAGGGCGCTGGGTTGATGGGTGAGGCTGGGCCTGAGGCCATCATGCCGCTG 13927 || ||||| |||||||| || | | | |||||||| ||||| || |||||||||||| Sbjct 3435 GCCTTCGCGAAGGGCGCAGGTGTCTTTGCCGAGGCTGGCCCTGAAGCAATCATGCCGCTG 3494 Query 13928 AAGCGCGGGCCGGACGGGA 13946 ||||||| ||||||||||| Sbjct 3495 AAGCGCGCGCCGGACGGGA 3513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139844204340214