Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq3 141 1e-27 seq4 116 5e-20 seq5 113 6e-19 seq1254 98.7 1e-14 seq1 98.7 1e-14 seq3056 95.1 1e-13 >seq3 Length=15630833 Score = 141 bits (156), Expect = 1e-27 Identities = 222/310 (72%), Gaps = 12/310 (4%) Strand=Plus/Plus Query 868700 TACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATC 868759 |||||| ||||| |||||| ||||||||||| || |||| |||||| |||||| Sbjct 12046924 TACTCGGAAACGCGTTTCTCGAAGAAGTTGGTCTTTCCATCGATCGAGATGTTCTCCATG 12046983 Query 868760 CACGGGAACGGGTTG--GGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGC 868817 | ||| || || | ||| |||| |||| |||||||||||| | |||||| Sbjct 12046984 AAGTCGAATGGATTCTTGACGT--TGTACAGCTTATCGCATCCGAGCTCCTGGAGCAGAT 12047041 Query 868818 GGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGC-GTTCATGCCGATGAGCGCC 868876 | ||||| || |||||||||||||| |||| | |||||| |||||| ||||| | | Sbjct 12047042 GATCGGCAACGAACTCGATGTACTGCGACATCA-GCCGGCAGTTCATTCCGATCATGTCG 12047100 Query 868877 ACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCGACGATGATCT-- 868934 || ||||||| ||| | | ||||| | |||||| ||||||| || |||||||| Sbjct 12047101 ACGGGCAGCGCTTCGGTGAGGAACTCCTGCTCGATGGCGACGGCGTCTCTGATGATCTCG 12047160 Query 868935 -GCCTGGGCACGTCGGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCAGGCAGGCAAAG 868993 || || | | ||| | ||||||| ||||| | |||||| ||||| || ||| Sbjct 12047161 AAGATGCGCTC-TTGGCTCA--GCTTGTTTTGAAGCATTGAGTAGAGGAGGCAAGCGAAG 12047217 Query 868994 TCGCAGTGCA 869003 |||| ||||| Sbjct 12047218 TCGCGGTGCA 12047227 Score = 91.5 bits (100), Expect = 2e-12 Identities = 117/157 (75%), Gaps = 11/157 (7%) Strand=Plus/Plus Query 869219 CCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGAT-GGCGCAGAAACTGCCCGAGAAAAA 869277 || ||||| || ||||||||||||||||| || || | ||| ||| ||| ||| || Sbjct 12047894 CCTGGCATCAGACCGCGCTTCTTGAGCCAGAAAATCGACGC-GAACGAGCCGCTGAAGAA 12047952 Query 869278 GATGCCCTCGACGGCGGCAAAGCCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTT 869337 ||||||||| ||||| || || |||||||||||||||| || ||| | ||| | Sbjct 12047953 GATGCCCTCAACGGCAGCGAACGCGATGAGCCGCTCGGCGAA-----CGATG-CCTTGGT 12048006 Query 869338 GTTG---ATCCACTTCATCGCCCAGTCGGCCTTTTTC 869371 || | ||||| | ||||||||||||||||||| Sbjct 12048007 GTCGGAAATCCAACGAAGCGCCCAGTCGGCCTTTTTC 12048043 >seq4 Length=19682253 Score = 116 bits (128), Expect = 5e-20 Identities = 160/221 (72%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | |||||| || || || |||||||| ||||| | || Sbjct 9479929 GCTTGGCAAGCTCTCCTGGAAGGATCAGACGGACAGCCGTCTGGATTTCGCGAGAAGAGA 9479988 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| |||||| | ||||||| |||| | Sbjct 9479989 TGGTAGAACGCTTGTTGTAGTGAGCAAGACGAGAGGCCTCAGCAGCGATGCGCTCGAAGA 9480048 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||||||||||||||||| ||||| | |||| ||||| || ||| |||| Sbjct 9480049 CGTCATTGACAAACGAGTTCATGATAGACATGGCCTTGGAGGAGACTCCAGTGTCTGGGT 9480108 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | || |||||||| || ||||||| | ||| ||||| || Sbjct 9480109 GAACTTGCTTGAGGACACGGTAGATGTA-GACAGAGTAGGA 9480148 Score = 107 bits (118), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || |||||||| ||||| | | || Sbjct 8778469 GCTTGGCAAGCTCTCCTGGAAGAATCAGACGGACAGCTGTCTGGATTTCGCGAGAGGAGA 8778528 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| |||||| | |||| || |||| | Sbjct 8778529 TGGTAGAACGCTTGTTGTAGTGAGCAAGACGAGAGGCCTCAGCAGCGATACGCTCGAAGA 8778588 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||||||||||||||||| ||||| | ||| ||||| || ||| |||| Sbjct 8778589 CGTCATTGACAAACGAGTTCATGATAGACATGGCTTTGGAGGAGACTCCAGTGTCTGGGT 8778648 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | || |||||||| || ||||||| | ||| ||||| || Sbjct 8778649 GAACTTGCTTGAGGACACGGTAGATGTA-GACAGAGTAGGA 8778688 Score = 107 bits (118), Expect = 2e-17 Identities = 158/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || || |||||||| ||||| | || Sbjct 8903402 GCTTGGCAAGCTCTCCTGGAAGAATCAGACGGACAGCCGTCTGGATTTCGCGAGAAGAGA 8903343 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| | || || ||||| |||||| | ||||||| || | | Sbjct 8903342 TGGTAGAACGCTTGTTGTAATGAGCAAGACGAGAGGCCTCAGCAGCGATGCGCTCAAAGA 8903283 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||||||||||||||||| ||||| | ||| ||||| || ||| |||| Sbjct 8903282 CGTCATTGACAAACGAGTTCATGATGGACATGGCTTTGGAGGAGACTCCAGTGTCTGGGT 8903223 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | ||||||||||| || ||||||| | ||| |||||||| Sbjct 8903222 GAACCTGCTTGAGGACACGGTAGATGTA-GACAGAGTACGA 8903183 Score = 93.3 bits (102), Expect = 5e-13 Identities = 140/199 (70%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 1592102 GACCAGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAG 1592161 || ||||||||||| || |||||| | ||||| ||||| | | ||||| || Sbjct 2668793 GATCAGAAGCGCACTGATGACATCGCCAGCTGGGATGTCGAGTTCCTCAAGGTCGACCAA 2668734 Query 1592162 CCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGAT 1592221 || || || ||| | ||| | || ||||||||| | || |||||| || ||||| Sbjct 2668733 GGAACTCTTTTCGAGATCATCTTGGCTGCCAACTACATGGATATCAAGGGACTTCTCGAC 2668674 Query 1592222 CTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAG 1592281 | ||||| |||| || |||||||||||||| ||||| || || || || ||| Sbjct 2668673 GTCTCCTGCAAAGCTGTTGCTAACATGATCAAGGGAAAGTCTCCAGATGAAATTCGCCGC 2668614 Query 1592282 ACCTTTAACATCAAGTACG 1592300 || || ||||||||| ||| Sbjct 2668613 ACATTCAACATCAAGAACG 2668595 Score = 91.5 bits (100), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Minus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||| || ||||| | ||||| ||||| | | ||||| || | Sbjct 2684005 AGAAGCGCACTGATGACATTGCCAGCTGGGATGTCGAGTTCCTCAAAGTCGACCAAGGAA 2683946 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || || ||| | ||| | || ||||||||| | || |||||| || |||||| | | Sbjct 2683945 CTCTTTTCGAGATCATCTTGGCTGCCAACTACATGGATATCAAGGGACTTCTCGATGTCG 2683886 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 ||||| |||| || || ||||||||||| ||||| || || || || ||| || | Sbjct 2683885 CCTGCAAAGCTGTTGCTAATATGATCAAGGGAAAGTCTCCAGATGAAATTCGCCGCACAT 2683826 Query 1592286 TTAACATCAAGTACG 1592300 | ||||||||| ||| Sbjct 2683825 TCAACATCAAGAACG 2683811 >seq5 Length=22087214 Score = 113 bits (124), Expect = 6e-19 Identities = 157/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || || || ||||| | || Sbjct 1560718 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGGACGGCCGTTTGAATTTCGCGGGATGAGA 1560659 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| || ||||| ||||||| | ||||||| |||| | Sbjct 1560658 TGGTCGATCTCTTGTTGTAGTGAGCAAGACGAGATGCCTCGGCGGCGATGCGTTCGAAGA 1560599 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | |||| |||| || ||| || | Sbjct 1560598 CGTCGTTGACGAACGAGTTCATGATCGACATGGCCTTGGAAGAGACTCCAGTGTCTGGAT 1560539 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 | |||||||||||||| ||||||| || ||||| || Sbjct 1560538 GGACCTGCTTGAGCACACGGTAGATGTACACAGAGTAGGA 1560499 Score = 109 bits (120), Expect = 7e-18 Identities = 156/220 (71%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || || || ||||| | || Sbjct 1547400 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGGACGGCCGTTTGAATTTCGCGGGATGAGA 1547459 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| || ||||| ||||||| ||||||| |||| | Sbjct 1547460 TGGTCGATCTCTTGTTGTAGTGAGCAAGACGAGATGCCTCGGCTGCGATGCGCTCGAAGA 1547519 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| ||||||||||||| |||||| | |||| |||| || ||| || | Sbjct 1547520 CGTCGTTGACGAACGAGTTCATGATCGACATGGCCTTGGAAGAGACTCCAGTGTCTGGAT 1547579 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 | |||||||||||||| ||||||| || ||||| || Sbjct 1547580 GGACCTGCTTGAGCACACGGTAGATGTACACAGAGTAGGA 1547619 Score = 100 bits (110), Expect = 3e-15 Identities = 154/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || || || ||||| | || Sbjct 9740575 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGGACGGCCGTTTGAATTTCGCGGGATGAGA 9740634 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| || ||||| ||||||| | ||||||| |||| | Sbjct 9740635 TGGTCGATCTCTTGTTGTAGTGAGCAAGACGAGAAGCCTCGGCGGCGATGCGCTCGAAGA 9740694 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 || ||||| || |||||||||| |||||| | |||| |||| || ||| || | Sbjct 9740695 CATCATTGACGAAAGAGTTCATGATCGACATGGCCTTGGAAGAGACTCCAGTGTCTGGAT 9740754 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 | |||||||||||||| ||||||| || ||||| || Sbjct 9740755 GGACCTGCTTGAGCACACGGTAGATGTACACAGAGTAGGA 9740794 Score = 95.1 bits (104), Expect = 1e-13 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || ||||| || || || ||||| | || Sbjct 9737350 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGGACGGCCGTTTGAATTTCGCGGGATGAGA 9737291 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| || ||||| ||||| | | ||||||| |||| | Sbjct 9737290 TGGTCGATCTCTTGTTGTAGTGAGCAAGACGAGAAGCCTCAGCGGCGATGCGCTCGAAGA 9737231 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 || ||||| || |||||||||| |||||| | |||| |||| || ||| || | Sbjct 9737230 CATCATTGACGAAAGAGTTCATGATCGACATGGCCTTGGAAGAGACTCCAGTGTCTGGAT 9737171 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 | |||||||||||||| ||||||| || ||||| || Sbjct 9737170 GGACCTGCTTGAGCACACGGTAGATGTACACAGAGTAGGA 9737131 Score = 95.1 bits (104), Expect = 1e-13 Identities = 153/220 (70%), Gaps = 0/220 (0%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | ||||| || || ||||| || || ||||| | || Sbjct 9790120 GCTTGGCGAGCTCTCCTGGAAGGATCAAACGAACAGCGGTTTGAATTTCGCGGGATGAGA 9790179 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || | |||||| |||| || ||||| ||||| | | ||||||| |||| | Sbjct 9790180 TGGTCGATCTCTTGTTGTAGTGAGCAAGACGAGAAGCCTCAGCGGCGATGCGCTCGAAGA 9790239 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 || ||||| || |||||||||| |||||| | |||| |||| || ||| || | Sbjct 9790240 CATCATTGACGAAAGAGTTCATGATCGACATGGCCTTGGAAGAGACTCCAGTGTCTGGAT 9790299 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 | |||||||||||||| ||||||| || ||||| || Sbjct 9790300 GGACCTGCTTGAGCACACGGTAGATGTACACAGAGTAGGA 9790339 Score = 95.1 bits (104), Expect = 1e-13 Identities = 133/187 (71%), Gaps = 0/187 (0%) Strand=Plus/Minus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||| || || || | | |||||| || |||||||||||||| || || | || Sbjct 14787612 GCTTGGCAAGCTCTCCTGGAAGGATCAGACGAACGGCGGTCTGGATTTCACGAGATGAGA 14787553 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | ||| ||| ||||| |||| || ||||| || |||| | |||| || |||| | Sbjct 14787552 TGGTGGAGCGTTTGTTGTAGTGGGCGAGACGAGAAGCTTCGGAGGCGATTCGCTCGAAAA 14787493 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| ||||| || || |||| Sbjct 14787492 CGTCGTTGACGAAGGAGTTCATGATGGACATGGCCTTTGAGGAGACTCCAGTATCTGGGT 14787433 Query 1254523 GCACCTG 1254529 | ||||| Sbjct 14787432 GAACCTG 14787426 >seq1254 Length=7548 Score = 98.7 bits (108), Expect = 1e-14 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || | | ||||| || ||||| || ||||| ||||| | || Sbjct 6810 GCTTGGCCAACTCTCCTGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGGGAAGAGA 6869 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| || || | ||||||| |||| | Sbjct 6870 TGGTCGAACGCTTGTTGTAGTGTGCAAGACGAGAAGCTTCAGCAGCGATGCGTTCGAAGA 6929 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| || |||||||||| ||||| | ||| ||||| || ||| |||| Sbjct 6930 CGTCATTGACGAAGGAGTTCATGATGGACATGGCCTTCGAGGAGACTCCAGTGTCTGGGT 6989 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | ||||||||||| || ||||||| | ||| |||||||| Sbjct 6990 GAACCTGCTTGAGGACACGGTAGATGTA-GACAGAGTACGA 7029 >seq1 Length=16658584 Score = 98.7 bits (108), Expect = 1e-14 Identities = 156/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || | | ||||| || ||||| || ||||| ||||| | || Sbjct 6942839 GCTTGGCCAACTCTCCTGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGGGAAGAGA 6942898 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || |||||||| |||| || ||||| || || | ||||||| |||| | Sbjct 6942899 TGGTCGAACGCTTGTTGTAGTGTGCAAGACGAGAAGCTTCAGCAGCGATGCGTTCGAAGA 6942958 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||| ||||| || |||||||||| ||||| | ||| ||||| || ||| |||| Sbjct 6942959 CGTCATTGACGAAGGAGTTCATGATGGACATGGCCTTCGAGGAGACTCCAGTGTCTGGGT 6943018 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | ||||||||||| || ||||||| | ||| |||||||| Sbjct 6943019 GAACCTGCTTGAGGACACGGTAGATGTA-GACAGAGTACGA 6943058 Score = 95.1 bits (104), Expect = 1e-13 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || | | ||||| || ||||| || ||||| ||||| | || Sbjct 6017750 GCTTGGCCAACTCTCCTGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGGGAAGAGA 6017809 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| |||| || ||||| || || | |||| || || | | Sbjct 6017810 TGGTTGAGCGTTTGTTGTAGTGGGCAAGACGAGAAGCTTCAGCAGCGATACGTTCAAAGA 6017869 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| ||||| || ||| |||| Sbjct 6017870 CGTCGTTGACGAAGGAGTTCATGATGGACATAGCCTTCGAGGAGACTCCAGTGTCTGGGT 6017929 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | ||||||||||| || ||||||| | ||| |||||||| Sbjct 6017930 GAACCTGCTTGAGGACACGGTAGATGTA-GACAGAGTACGA 6017969 Score = 91.5 bits (100), Expect = 2e-12 Identities = 137/195 (70%), Gaps = 0/195 (0%) Strand=Plus/Plus Query 1592106 AGAAGCGCACCGACGACATCTCGCCGTGGGACAAGGAGTTTTGCGACGTCGAGCAGCCCA 1592165 |||||||||| || || ||| | ||||| ||||| | | ||||| || | Sbjct 6203949 AGAAGCGCACTGATGATATCGCCAGCTGGGATGTCGAGTTCCTCAAGGTCGACCAAGGAA 6204008 Query 1592166 CCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTCTGCTCGATCTTG 1592225 | || || ||| | ||| | || ||||||||| | || |||||| || |||||| | Sbjct 6204009 CTCTTTTCGAGCTCATCTTGGCTGCCAACTACTTGGATATCAAGGGACTTCTCGATGTCA 6204068 Query 1592226 GGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGATCCGCAAGACCT 1592285 ||||| |||| || |||||||||||||| ||||| || || || || ||| || | Sbjct 6204069 CCTGCAAAACTGTTGCTAACATGATCAAGGGAAAGTCTCCAGAAGAAATTCGCCGCACAT 6204128 Query 1592286 TTAACATCAAGTACG 1592300 | ||||||||| ||| Sbjct 6204129 TCAACATCAAGAACG 6204143 >seq3056 Length=3815 Score = 95.1 bits (104), Expect = 1e-13 Identities = 155/221 (70%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 1254343 GCCTGGCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGA 1254402 || |||||| || || | | ||||| || ||||| || ||||| ||||| | || Sbjct 500 GCTTGGCCAACTCTCCTGGAAGGATCAAACGGACGGCCGTTTGGATTTCGCGGGAAGAGA 559 Query 1254403 TCGTGTTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCA 1254462 | || ||| ||||| |||| || ||||| || || | |||| || || | | Sbjct 560 TGGTTGAGCGTTTGTTGTAGTGGGCAAGACGAGAAGCTTCAGCAGCGATACGTTCAAAGA 619 Query 1254463 TGTCGTTGACAAACGAGTTCATGACCGACATCGACTTGTTGGAGATGCCCACGTCGGGGT 1254522 ||||||||| || |||||||||| ||||| | ||| ||||| || ||| |||| Sbjct 620 CGTCGTTGACGAAGGAGTTCATGATGGACATAGCCTTCGAGGAGACTCCAGTGTCTGGGT 679 Query 1254523 GCACCTGCTTGAGCACCTTGTAGATGAACGAC-GAGTACGA 1254562 | ||||||||||| || ||||||| | ||| |||||||| Sbjct 680 GAACCTGCTTGAGGACACGGTAGATGTA-GACAGAGTACGA 719 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106872571844933