Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_022067.1 Length=109960 Score E Sequences producing significant alignments: (Bits) Value seq1669 87.8 1e-12 >seq1669 Length=8647 Score = 87.8 bits (96), Expect = 1e-12 Identities = 118/164 (72%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 95671 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 95730 ||| | ||||| ||||| ||||| |||| || ||||| || || |||||||| ||||| Sbjct 6645 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGGCGCTGCGTGGCCAG 6586 Query 95731 GACGAGATGAATGCCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 95790 || || || |||||||| || ||||||||||| || | ||| | || |||| | Sbjct 6585 GATCAGGTGGATGCCGGCCGCACGCGCCTTCTGTGCCAGGCGCGCGATCAGCTCCTCCA- 6527 Query 95791 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCCAGCTCGTCGA 95834 | |||||| | || |||||| | ||| || | ||||||| Sbjct 6526 --CCTTCTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGA 6485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351733271800169