Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_023610.1 Length=218339 Score E Sequences producing significant alignments: (Bits) Value seq758 84.2 3e-11 >seq758 Length=8775 Score = 84.2 bits (92), Expect = 3e-11 Identities = 127/180 (71%), Gaps = 3/180 (2%) Strand=Plus/Minus Query 87442 GGTAAATCACACTGAGCCACGTCTCCGTTAACAATCACGGTCACGTTCTCACCCAGACGT 87501 ||||||||| |||| ||| ||| ||| ||| | || | ||| |||| ||| Sbjct 7698 GGTAAATCAACCTGACTGGGGTCACCGGTAATAATAAACTTCGCATTCATCCCCATACGG 7639 Query 87502 GTCAGGAACATTTTCATCTGTGCCTTGGTTACGTTCTGGGCTTCGTCCAGGATAACTACC 87561 || ||||||||||||||||||| | ||| || || ||||| ||||| || || | | Sbjct 7638 GTAAGGAACATTTTCATCTGTGAATGTGTTGTATTTTGTGCTTCATCCAGAATTACAAAC 7579 Query 87562 GCGTTCTCAAACGTGCGGCCACGCATATACGCGAAGGGAGCAATTTC---CACCTTCTTC 87618 || | |||| || || ||||||||| | || || || ||||| || ||||||||| Sbjct 7578 GCATCATCAAGAGTACGACCACGCATAAATGCCAATGGTGCAATCTCTATGACCTTCTTC 7519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 698528429861960