Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_023724.1 Length=62991 Score E Sequences producing significant alignments: (Bits) Value seq2875 95.1 5e-15 >seq2875 Length=2430 Score = 95.1 bits (104), Expect = 5e-15 Identities = 100/132 (76%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 52002 CCGTTCGTGCATCCGCACGTTGCCCTCATGCCCGACGCGCACGTCGGCAAAGGTTCGTCT 52061 |||||||| ||| || ||| | ||||| |||| |||| | ||||| || || | Sbjct 580 CCGTTCGTCGGGCCGTGGGTGGCCGTGATGCCGGACGTGCACCTGGGCAAGGGCGCGACC 639 Query 52062 GTTGGTACCGTCATCCCCACCCGCGGCGCAGTCATCCCCGCCGCGGTCGGTGTCGACATC 52121 || || | || ||||| || | ||||| ||||||| ||||||||||| ||||||||| Sbjct 640 GTGGGCTCGGTGATCCCGACGCAGGGCGCGATCATCCCGGCCGCGGTCGGCGTCGACATC 699 Query 52122 GGCTGCGGCATG 52133 |||||||||||| Sbjct 700 GGCTGCGGCATG 711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 201438423289128