Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_023738.1 Length=106327 Score E Sequences producing significant alignments: (Bits) Value seq1669 95.1 8e-15 >seq1669 Length=8647 Score = 95.1 bits (104), Expect = 8e-15 Identities = 115/156 (74%), Gaps = 3/156 (2%) Strand=Plus/Minus Query 94593 GTTGCTCTTGATGAGGCCCGTCACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAG 94652 |||| |||||| ||||| || | ||| ||||| || || |||||||| ||||||| || Sbjct 6639 GTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGGCGCTGCGTGGCCAGGATCAG 6580 Query 94653 ATGAATGCCGGCCGCACGCGCCTTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTT 94712 || ||||||||||||||||||||||| || | ||| | || |||| ||| || Sbjct 6579 GTGGATGCCGGCCGCACGCGCCTTCTGTGCCAGGCGCGCGATCAGCTCCTCCACC---TT 6523 Query 94713 CTTGTAGCCACCCATCATGAGGTCCGCGAGTTCATC 94748 |||| | | |||||| | ||| |||| ||| || Sbjct 6522 CTTGCCGACGATCATCATCATGTCGGCGAATTCGTC 6487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340108132141232