Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq3 104 2e-17 >seq3 Length=15630833 Score = 104 bits (114), Expect = 2e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 148237 TACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGACGCGCATGAGC 148296 ||||||||||| || | | ||||||| ||||| || || | ||||| ||||| | | Sbjct 10142741 TACGTCTCAATCGCCGCGGCAATGTCGTTTCCGTGGATTCCAATGGCGACACGCATCAAC 10142682 Query 148297 ATGTGCTGTGGTCGTTCGGCAACTTGATTGTTGATCTTGAGAAGATATCCATTTTCGAGG 148356 || |||||||||| ||| | |||| ||||||||||||||||| || | ||||| Sbjct 10142681 ATCTGCTGTGGTCTCTCGACGACTTCCTTGTTGATCTTGAGAAGGTAAGAACGCTCGAGC 10142622 Query 148357 GTTTTGTAACCAAAGTACTTGTAATCAAAATCTAGCTCGTAAGCGATGGC 148406 || ||| | |||||||| ||||| ||||| ||||| ||||||| Sbjct 10142621 GTCTTGAATCCAAAGTAGGTGTAAGAGTAATCTCTGTCGTAGACGATGGC 10142572 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476591843627640