Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq3 95.1 1e-14 >seq3 Length=15630833 Score = 95.1 bits (104), Expect = 1e-14 Identities = 136/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 ||||||||| |||||||| |||| ||| || || |||| || |||||||| || || || Sbjct 4186227 CTCCTTTTGGATGTTGTAGTCGGACAAAGTGCGTCCGTCCTCGAGCTGCTTTCCAGCGAA 4186168 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 ||||| ||||||||||| | || | | |||||||| ||| || ||| | | | Sbjct 4186167 GATCAAGCGCTGCTGGTCTGGTGGGATTCCTTCCTTGTCTTGGATTTTGGCCTTGACATT 4186108 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| | || || |||| ||||| || || || || | ||| || || Sbjct 4186107 CTCGATGGTGTCAGAAGCCTCGACTTCCAAGGTGATGGTCTTTCCGGTAAGAGTCTTGAC 4186048 Query 35725 AAATATCTGCAT 35736 ||| |||||||| Sbjct 4186047 AAAGATCTGCAT 4186036 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450775292144920