Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Caenorhabditis_20nigoni_20[genbank_20GCA_5F001643685.1_202016-05-13] 3,249 sequences; 137,395,604 total letters Query= NC_026584.1 Length=109871 Score E Sequences producing significant alignments: (Bits) Value seq1669 91.5 1e-13 >seq1669 Length=8647 Score = 91.5 bits (100), Expect = 1e-13 Identities = 119/164 (73%), Gaps = 3/164 (2%) Strand=Plus/Minus Query 97658 CGGCACGTTGGATTTGATAAGGCCTGTGACTACATCCACGGAGGGCCGCTGCGTCGCCAG 97717 ||| | ||||| ||||| ||||| |||| || ||||| || || |||||||| ||||| Sbjct 6645 CGGGATGTTGGCCTTGATCAGGCCGGTGATCACGTCCACCGACGGGCGCTGCGTGGCCAG 6586 Query 97718 GACGAGATGAATACCGGCTGCGCGCGCCTTCTGGGCGATGCGGACAATGTTGGCCTCGAC 97777 || || || || ||||| || ||||||||||| || | ||| | || |||| | Sbjct 6585 GATCAGGTGGATGCCGGCCGCACGCGCCTTCTGTGCCAGGCGCGCGATCAGCTCCTCCA- 6527 Query 97778 TTCTTTCTTGTAGCCGCCCATCATGAGGTCTGCGAGTTCGTCGA 97821 | |||||| | || |||||| | ||| |||| |||||||| Sbjct 6526 --CCTTCTTGCCGACGATCATCATCATGTCGGCGAATTCGTCGA 6485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 351448483077448